Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p14800 Brassica napus
A08p35900 Brassica napus
A09p66850 Brassica napus
A10p05270 Brassica napus
Aa31LG1G7720 Aethionema arabicum
Aa31LG5G6070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.465 Anthoceros agrestis
Actinidia07504 Actinidia chinensis
Actinidia07505 Actinidia chinensis
Actinidia12527 Actinidia chinensis
Actinidia12528 Actinidia chinensis
Ah.02g120770 Amaranthus hybridus
Ah.03g147560 Amaranthus hybridus
AL1G16690 Arabidopsis lyrata
AL4G25720 Arabidopsis lyrata
Aqoxy1G01593 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0DED4Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1944SK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.30A6BG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MMUF9T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TCR54Y Arachis hypogaea
AT1G06680 Arabidopsis thaliana
AT2G30790 Arabidopsis thaliana
ATR0681G398 Amborella trichopoda
Atru.chr6.2016 Acer truncatum
AUR62003524 Chenopodium quinoa
AUR62017838 Chenopodium quinoa
BcaB01g04916 Brassica carinata
BcaB02g10342 Brassica carinata
BcaC02g11165 Brassica carinata
BcaC07g36796 Brassica carinata
BcaC07g42054 Brassica carinata
BcaNung05935 Brassica carinata
BolC4t23513H Brassica oleracea
BolC5t29259H Brassica oleracea
BolC8t47063H Brassica oleracea
BolC8t52634H Brassica oleracea
BraA05t20408Z Brassica rapa
BraA08t35497Z Brassica rapa
BraA09t42022Z Brassica rapa
BraA10t42792Z Brassica rapa
C04p19800 Brassica napus
C05p04870 Brassica napus
C08p02670 Brassica napus
C08p51070 Brassica napus
CAN.G212.2 Capsicum annuum
CAN.G488.26 Capsicum annuum
CANSAT64G2967 Cannabis sativa
CARHR006360 Cardamine hirsuta
CARHR124260 Cardamine hirsuta
Carub.0001s0601 Capsella rubella
Carub.0004s1200 Capsella rubella
Ca_13941_v3 Cicer arietinum L.
CBR_g259 Chara braunii
Cc05_g00840 Coffea canephora
CDE04G2981 Ceratophyllum demersum
CDE12G0092 Ceratophyllum demersum
Cfa023023 Carpinus fangiana
Ciclev10032502m.g Citrus clementina
CiPaw.04G137000 Carya illinoinensis
ClCG07G010800 Citrullus lanatus
COL.COLO4_29888 Corchorus olitorius
Cpa.g.sc187.7 Carica papaya
Cre12.g550850 Chlamydomonas reinhardtii
CsaV3_4G007520 Cucumis sativus L.
CSS0028528 Camellia sinensis var. sinensis
DCAR_009820 Daucus carota
DCAR_023039 Daucus carota
Dinv20234 Davidia involucrata
Duzib264G1267 Durio zibethinus
ECA234G0286 Erigeron canadensis
ECA246G2888 Erigeron canadensis
EL10Ac6g15357 Beta vulgaris
Eucgr.A02039 Eucalyptus grandis
FAN02G0185 Fragaria x ananassa
FAN05G3719 Fragaria x ananassa
FAN09G2615 Fragaria x ananassa
FAN14G5409 Fragaria x ananassa
FvH4_6g38900 Fragaria vesca
Glyma.02G282500 Glycine max
Glyma.08G304200 Glycine max
Glyma.14G031800 Glycine max
Glyma.18G114900 Glycine max
Gohir.A05G380700 Gossypium hirsutum
Gohir.A10G151800 Gossypium hirsutum
Gohir.D04G034900 Gossypium hirsutum
Gohir.D10G114500 Gossypium hirsutum
Gorai.011G126200 Gossypium raimondii
Gorai.012G039400 Gossypium raimondii
GSVIVG01020818001 Vitis vinifera
HanXRQChr04g0099261 Helianthus annuus
HanXRQChr05g0129681 Helianthus annuus
HanXRQChr06g0171591 Helianthus annuus
Haze_13608 Corylus avellana
Hma1.2p1_0571F.1_g180910 Hydrangea macrophylla
HPP92_015688 Vanilla planifolia
Hund04362 Selenicereus undatus
Lalb_Chr04g0249011 Lupinus albus
Lalb_Chr10g0106481 Lupinus albus
Lalb_Chr17g0348121 Lupinus albus
Lj1A651T46 Lonicera japonica
Lj6g0020294 Lotus japonicus
Lj8C98T13 Lonicera japonica
LjContig00049g0021127 Lotus japonicus
Lsat_1_v5_gn_3_35220 Lactuca sativa
Manes.01G131300 Manihot esculenta
Manes.02G089900 Manihot esculenta
Mapoly0058s0006 Marchantia polymorpha
Mapoly0058s0007 Marchantia polymorpha
Mapoly0094s0007 Marchantia polymorpha
MBI02_g35794_MAGBIO Magnolia biondii
MBI18_g28201_MAGBIO Magnolia biondii
MCO12G360 Micromonas commoda
MD09G1146300 Malus domestica
MD17G1132900 Malus domestica
Medtr3g449930 Medicago truncatula
Medtr5g090410 Medicago truncatula
MELO3C016190.2 Cucumis melo
Migut.H01272 Erythranthe guttata
Migut.M00114 Erythranthe guttata
MSTRG.12265 Avicennia marina
MSTRG.14106 Avicennia marina
Nitab4.5_0000019g0250 Nicotiana tabacum
Nitab4.5_0005601g0020 Nicotiana tabacum
Nitab4.5_0006644g0080 Nicotiana tabacum
Nitab4.5_0008321g0040 Nicotiana tabacum
Nn7g37873 Nelumbo nucifera
Nn7g37874 Nelumbo nucifera
Oeu012357.1 Olea europaea
Oeu056845.1 Olea europaea
Oeu056847.1 Olea europaea
Os07g0141400 Oryza sativa ssp. japonica
Peaxi162Scf00359g01218 Petunia axillaris
PGR042G1985 Punica granatum
PGR142G4178 Punica granatum
PGSC0003DMG400000926 Solanum tuberosum
PGSC0003DMG400031395 Solanum tuberosum
Phvul.006G027801 Phaseolus vulgaris
Phvul.008G196500 Phaseolus vulgaris
Potri.002G055700 Populus trichocarpa
Potri.005G206700 Populus trichocarpa
Pp3c11_11560 Physcomitrium patens
Pp3c11_12080 Physcomitrium patens
Pp3c11_14700 Physcomitrium patens
Pp3c1_16780 Physcomitrium patens
Pp3c2_23590 Physcomitrium patens
Pp3c7_12850 Physcomitrium patens
PRCOL_00002970 Prasinoderma coloniale
PRCOL_00005580 Prasinoderma coloniale
Prupe.3G179400 Prunus persica
Psat2g018280 Pisum sativum
Psat5g189160 Pisum sativum
PSO541G1729 Papaver somniferum
PSO675G5089 Papaver somniferum
QL08p045530 Quercus lobata
RcHm_v2.0_Chr2g0152481 Rosa chinensis
Rhsim12G0013500 Rhododendron simsii
Sabra02G0045200 Salix brachista
Sabra05G0157200 Salix brachista
SalBow7G4383 Salvia bowleyana
Sc07g0004260 Simmondsia chinensis
Sed0008663 Sechium edule
Sed0027030 Sechium edule
SEGI_24342 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18386 Striga asiatica
SMO276G0004 Selaginella moellendorffii
Solyc07g044860.3 Solanum lycopersicum
Sopen07g023420 Solanum pennellii
Sp1g05410 Schrenkiella parvula
Sp4g13290 Schrenkiella parvula
THA.LOC104800813 Tarenaya hassleriana
THA.LOC104816082 Tarenaya hassleriana
THA.LOC104826247 Tarenaya hassleriana
Thecc.01G166600 Theobroma cacao
Thhalv10008504m.g Eutrema salsugineum
Thhalv10017096m.g Eutrema salsugineum
TPR.G10873 Trifolium pratense
TPR.G14744 Trifolium pratense
TPR.G8779 Trifolium pratense
TWI14G0595 Tripterygium wilfordii
TWI23G0402 Tripterygium wilfordii
unitig_52.g17321 Utricularia gibba
unitig_578.g16007 Utricularia gibba
unitig_8.g4601 Utricularia gibba
vmacro08742 Vaccinium macrocarpon
VMungo0540G1926 Vigna mungo
VMungo0647G2531 Vigna mungo
Zm00001eb117670 Zea mays
Zm00001eb299760 Zea mays

User provided reference genes

Program Settings