Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p19660 Brassica napus
Aa31LG2G1350 Aethionema arabicum
Aa31LG2G1380 Aethionema arabicum
Aa31LG9G12540 Aethionema arabicum
Aa31LG9G5100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2840 Anthoceros agrestis
Actinidia15538 Actinidia chinensis
Ah.11g049790 Amaranthus hybridus
AL8G19100 Arabidopsis lyrata
Aqoxy5G00932 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0DQ0A3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LR79EL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q7U2Y9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WPQ8T0 Arachis hypogaea
AT5G42390 Arabidopsis thaliana
ATR0605G213 Amborella trichopoda
Atru.chr13.15 Acer truncatum
AUR62011864 Chenopodium quinoa
AUR62024707 Chenopodium quinoa
BcaB07g31078 Brassica carinata
BcaB07g31079 Brassica carinata
BcaC04g21997 Brassica carinata
BcaNung05247 Brassica carinata
BolC9t55396H Brassica oleracea
BraA09t37577Z Brassica rapa
C09p25020 Brassica napus
CAN.G1425.12 Capsicum annuum
CAN.G1425.13 Capsicum annuum
CAN.G1425.17 Capsicum annuum
CAN.G2827.1 Capsicum annuum
CAN.G2827.2 Capsicum annuum
CAN.G843.29 Capsicum annuum
CAN.G843.30 Capsicum annuum
CAN.G962.8 Capsicum annuum
CANSAT01G2380 Cannabis sativa
CANSAT25G0240 Cannabis sativa
CARHR285100 Cardamine hirsuta
Carub.0008s0677 Capsella rubella
Ca_24435_v3 Cicer arietinum L.
CBR_g32249 Chara braunii
Cc04_g05970 Coffea canephora
CDE06G0366 Ceratophyllum demersum
CDE07G1872 Ceratophyllum demersum
Cfa014172 Carpinus fangiana
Ciclev10000050m.g Citrus clementina
CiPaw.08G079400 Carya illinoinensis
COL.COLO4_04620 Corchorus olitorius
Cpa.g.sc36.89 Carica papaya
Cre17.g723250 Chlamydomonas reinhardtii
CsaV3_2G009400 Cucumis sativus L.
CSS0037547 Camellia sinensis var. sinensis
DCAR_003535 Daucus carota
Dinv03487 Davidia involucrata
Duzib093G0207 Durio zibethinus
Duzib248G0791 Durio zibethinus
ECA236G2986 Erigeron canadensis
EL10As5g23474 Beta vulgaris
Eucgr.F03633 Eucalyptus grandis
FAN03G0989 Fragaria x ananassa
FAN03G2152 Fragaria x ananassa
FAN03G3001 Fragaria x ananassa
FAN06G0417 Fragaria x ananassa
FAN06G0859 Fragaria x ananassa
FAN06G1218 Fragaria x ananassa
FAN06G1282 Fragaria x ananassa
FAN06G1892 Fragaria x ananassa
FAN06G3471 Fragaria x ananassa
FAN06G3529 Fragaria x ananassa
FAN06G4184 Fragaria x ananassa
FAN10G0294 Fragaria x ananassa
FAN10G0430 Fragaria x ananassa
FAN10G1407 Fragaria x ananassa
FAN10G1660 Fragaria x ananassa
FAN10G3129 Fragaria x ananassa
FAN10G3171 Fragaria x ananassa
FAN10G4116 Fragaria x ananassa
FAN19G0570 Fragaria x ananassa
FAN19G1728 Fragaria x ananassa
FAN23G1588 Fragaria x ananassa
FAN23G2090 Fragaria x ananassa
FAN26G0474 Fragaria x ananassa
FAN26G0913 Fragaria x ananassa
FAN27G3187 Fragaria x ananassa
FAN28G0698 Fragaria x ananassa
FAN28G1390 Fragaria x ananassa
FAN28G2113 Fragaria x ananassa
FAN28G2388 Fragaria x ananassa
FvH4_1g28270 Fragaria vesca
FvH4_1g30291 Fragaria vesca
FvH4_1g30300 Fragaria vesca
FvH4_7g00590 Fragaria vesca
FvH4_7g00733 Fragaria vesca
FvH4_7g00770 Fragaria vesca
FvH4_7g01530 Fragaria vesca
FvH4_7g01540 Fragaria vesca
FvH4_7g01860 Fragaria vesca
FvH4_7g02670 Fragaria vesca
FvH4_7g03800 Fragaria vesca
FvH4_7g05200 Fragaria vesca
FvH4_7g05210 Fragaria vesca
Glyma.01G233300 Glycine max
Glyma.05G077034 Glycine max
Glyma.11G009500 Glycine max
Gohir.A01G101300 Gossypium hirsutum
Gohir.D01G086200 Gossypium hirsutum
Gorai.002G111600 Gossypium raimondii
GSVIVG01013468001 Vitis vinifera
GSVIVG01022444001 Vitis vinifera
HanXRQChr03g0085051 Helianthus annuus
HanXRQChr04g0119021 Helianthus annuus
HanXRQChr15g0481001 Helianthus annuus
Haze_22896 Corylus avellana
Hma1.2p1_0471F.1_g159520 Hydrangea macrophylla
HPP92_022034 Vanilla planifolia
Hund02917 Selenicereus undatus
Lalb_Chr09g0320141 Lupinus albus
Lalb_Chr16g0376561 Lupinus albus
Lj5C162T4 Lonicera japonica
LjContig00222g0019593 Lotus japonicus
Lsat_1_v5_gn_7_31540 Lactuca sativa
Manes.05G198000 Manihot esculenta
Mapoly0022s0090 Marchantia polymorpha
MBI01_g09379_MAGBIO Magnolia biondii
MCO10G275 Micromonas commoda
MD00G1159400 Malus domestica
MD00G1204700 Malus domestica
Medtr5g007380 Medicago truncatula
MELO3C008771.2 Cucumis melo
Migut.D01195 Erythranthe guttata
Migut.D01196 Erythranthe guttata
MSTRG.9366 Avicennia marina
Nitab4.5_0002046g0120 Nicotiana tabacum
Nitab4.5_0002450g0120 Nicotiana tabacum
Nn6g31540 Nelumbo nucifera
Oeu015113.1 Olea europaea
Oeu015114.3 Olea europaea
Os06g0625400 Oryza sativa ssp. japonica
Peaxi162Scf00314g00434 Petunia axillaris
PGR031G0531 Punica granatum
PGSC0003DMG400014254 Solanum tuberosum
Phvul.002G040800 Phaseolus vulgaris
Potri.002G235700 Populus trichocarpa
Potri.014G149200 Populus trichocarpa
Pp3c16_2100 Physcomitrium patens
Pp3c25_1270 Physcomitrium patens
Pp3c25_1280 Physcomitrium patens
Pp3c25_1330 Physcomitrium patens
PRCOL_00001043 Prasinoderma coloniale
Prupe.7G271900 Prunus persica
Psat2g187560 Pisum sativum
Psat2g189160 Pisum sativum
PSO017G4161 Papaver somniferum
PSO170G0589 Papaver somniferum
PSO541G6510 Papaver somniferum
PSO675G5232 Papaver somniferum
QL02p016456 Quercus lobata
RcHm_v2.0_Chr3g0491051 Rosa chinensis
Rhsim02G0141400 Rhododendron simsii
Rhsim02G0141800 Rhododendron simsii
Rhsim02G0142400 Rhododendron simsii
Rhsim09G0100400 Rhododendron simsii
Sabra14G0112500 Salix brachista
SalBow1G1353 Salvia bowleyana
Sc17g0000620 Simmondsia chinensis
Sed0011503 Sechium edule
SEGI_01344 Sequoiadendron giganteum
SEGI_09953 Sequoiadendron giganteum
SEGI_14127 Sequoiadendron giganteum
SEGI_17718 Sequoiadendron giganteum
SEGI_23678 Sequoiadendron giganteum
SEGI_23826 Sequoiadendron giganteum
SHI18575 Sapria himalayana
SMO117G0011 Selaginella moellendorffii
Solyc03g118430.3 Solanum lycopersicum
Sopen03g037320 Solanum pennellii
Sp7g08050 Schrenkiella parvula
TAR381G0543 Trochodendron aralioides
THA.LOC104806863 Tarenaya hassleriana
THA.LOC104813211 Tarenaya hassleriana
Thecc.08G097100 Theobroma cacao
Thhalv10003133m.g Eutrema salsugineum
TPR.G38003 Trifolium pratense
TWI38G0156 Tripterygium wilfordii
TWI63G1168 Tripterygium wilfordii
unitig_0.g345 Utricularia gibba
vmacro15971 Vaccinium macrocarpon
VMungo1215G1560 Vigna mungo
Zm00001eb275640 Zea mays
Zm00001eb387800 Zea mays

User provided reference genes

Program Settings