Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p28330 Brassica napus
A03p18920 Brassica napus
A05p11750 Brassica napus
A09p37730 Brassica napus
Aa31LG9G7730 Aethionema arabicum
Aa31LG9G8870 Aethionema arabicum
Aa31sc652G110 Aethionema arabicum
Aa31sc652G20 Aethionema arabicum
Aa31sc86G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis
Actinidia07592 Actinidia chinensis
Actinidia26134 Actinidia chinensis
Ah.09g237490 Amaranthus hybridus
AL1G41920 Arabidopsis lyrata
AL4G29600 Arabidopsis lyrata
AL8G15690 Arabidopsis lyrata
Aqoxy1G02347 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea
AT1G28330 Arabidopsis thaliana
AT2G33830 Arabidopsis thaliana
AT5G44300 Arabidopsis thaliana
ATR0752G193 Amborella trichopoda
Atru.chr10.1820 Acer truncatum
Atru.chr10.1837 Acer truncatum
AUR62014851 Chenopodium quinoa
AUR62017046 Chenopodium quinoa
BcaB01g03917 Brassica carinata
BcaB02g10597 Brassica carinata
BcaB07g30534 Brassica carinata
BcaB07g32449 Brassica carinata
BcaC01g05821 Brassica carinata
BcaC01g05822 Brassica carinata
BcaC02g11461 Brassica carinata
BcaC03g16649 Brassica carinata
BcaC05g26841 Brassica carinata
BolC2t10526H Brassica oleracea
BolC3t14590H Brassica oleracea
BolC4t23094H Brassica oleracea
BolC5t31435H Brassica oleracea
BraA02t07868Z Brassica rapa
BraA03t11151Z Brassica rapa
BraA05t20119Z Brassica rapa
BraA09t39285Z Brassica rapa
C02p44910 Brassica napus
C03p22060 Brassica napus
C04p15210 Brassica napus
C05p27220 Brassica napus
CAN.G529.26 Capsicum annuum
CANSAT35G1140 Cannabis sativa
CARHR027820 Cardamine hirsuta
CARHR127940 Cardamine hirsuta
CARHR178890 Cardamine hirsuta
Carub.0001s2678 Capsella rubella
Carub.0004s1550 Capsella rubella
Carub.0008s0422 Capsella rubella
Ca_00350_v3 Cicer arietinum L.
Cc02_g13650 Coffea canephora
CDE05G2086 Ceratophyllum demersum
CDE11G0243 Ceratophyllum demersum
Cfa000510 Carpinus fangiana
Ciclev10017162m.g Citrus clementina
CiPaw.04G030300 Carya illinoinensis
CiPaw.09G062300 Carya illinoinensis
CiPaw.10G051200 Carya illinoinensis
ClCG01G023140 Citrullus lanatus
ClCG03G008090 Citrullus lanatus
COL.COLO4_29750 Corchorus olitorius
COL.COLO4_31436 Corchorus olitorius
Cpa.g.sc373.3 Carica papaya
CsaV3_1G012460 Cucumis sativus L.
CsaV3_6G050280 Cucumis sativus L.
CSS0033873 Camellia sinensis var. sinensis
CSS0035295 Camellia sinensis var. sinensis
CSS0037340 Camellia sinensis var. sinensis
DCAR_003387 Daucus carota
DCAR_008021 Daucus carota
Dinv17335 Davidia involucrata
Dinv40586 Davidia involucrata
Duzib160G0312 Durio zibethinus
Duzib235G1039 Durio zibethinus
ECA236G4733 Erigeron canadensis
EL10Ac8g20421 Beta vulgaris
Eucgr.D00606 Eucalyptus grandis
Eucgr.E03257 Eucalyptus grandis
FAN11G3953 Fragaria x ananassa
FAN16G2355 Fragaria x ananassa
FAN21G0750 Fragaria x ananassa
FAN25G0655 Fragaria x ananassa
FvH4_3g08830 Fragaria vesca
Glyma.13G237000 Glycine max
Glyma.15G076500 Glycine max
Gohir.A05G159800 Gossypium hirsutum
Gohir.A06G129700 Gossypium hirsutum
Gohir.D05G162500 Gossypium hirsutum
Gohir.D06G133900 Gossypium hirsutum
Gorai.009G167500 Gossypium raimondii
Gorai.010G155600 Gossypium raimondii
GSVIVG01021092001 Vitis vinifera
HanXRQChr01g0003821 Helianthus annuus
HanXRQChr04g0123791 Helianthus annuus
Haze_06402 Corylus avellana
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla
HPP92_014190 Vanilla planifolia
HPP92_018480 Vanilla planifolia
HPP92_018482 Vanilla planifolia
Lalb_Chr09g0327781 Lupinus albus
Lalb_Chr15g0089711 Lupinus albus
Lalb_Chr18g0059451 Lupinus albus
Lj6g0013661 Lotus japonicus
Lsat_1_v5_gn_1_124360 Lactuca sativa
Lsat_1_v5_gn_7_20981 Lactuca sativa
Manes.16G030000 Manihot esculenta
Manes.17G047900 Manihot esculenta
Mapoly0057s0054 Marchantia polymorpha
MBI02_g32444_MAGBIO Magnolia biondii
MD05G1311800 Malus domestica
MD14G1054500 Malus domestica
Medtr2g014240 Medicago truncatula
MELO3C002620.2 Cucumis melo
MELO3C007269.2 Cucumis melo
Migut.H01476 Erythranthe guttata
Migut.M01120 Erythranthe guttata
MSTRG.13203 Avicennia marina
MSTRG.15866 Avicennia marina
Nitab4.5_0000516g0130 Nicotiana tabacum
Nitab4.5_0003487g0100 Nicotiana tabacum
Nn1g04163 Nelumbo nucifera
Oeu012144.1 Olea europaea
Oeu029367.1 Olea europaea
Oeu056100.2 Olea europaea
Os11g0671000 Oryza sativa ssp. japonica
Peaxi162Scf00461g01011 Petunia axillaris
Peaxi162Scf01100g00009 Petunia axillaris
PGR004G0839 Punica granatum
PGR042G3375 Punica granatum
PGSC0003DMG400012826 Solanum tuberosum
PGSC0003DMG400029732 Solanum tuberosum
Phvul.006G183600 Phaseolus vulgaris
Potri.004G047100 Populus trichocarpa
Pp3c10_24000 Physcomitrium patens
Pp3c15_6160 Physcomitrium patens
Pp3c20_21690 Physcomitrium patens
Pp3c23_13750 Physcomitrium patens
Pp3c24_1050 Physcomitrium patens
Prupe.4G050800 Prunus persica
Psat1g203680 Pisum sativum
PSO541G4117 Papaver somniferum
PSO675G3190 Papaver somniferum
QL05p041782 Quercus lobata
RcHm_v2.0_Chr5g0008921 Rosa chinensis
Rhsim02G0132700 Rhododendron simsii
Sabra04G0029500 Salix brachista
SalBow8G2511 Salvia bowleyana
Sc17g0006070 Simmondsia chinensis
Sc24g0001020 Simmondsia chinensis
Sed0001316 Sechium edule
Sed0007569 Sechium edule
Sed0017838 Sechium edule
Sed0024812 Sechium edule
SEGI_31386 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29703 Striga asiatica
SGA_v2.0_scaffold22G09682 Striga asiatica
SMO343G0126 Selaginella moellendorffii
SMO367G0919 Selaginella moellendorffii
Solyc02g077880.3 Solanum lycopersicum
Solyc03g006360.3 Solanum lycopersicum
Sopen02g022730 Solanum pennellii
Sopen03g002370 Solanum pennellii
Sp1g24570 Schrenkiella parvula
Sp2g09130 Schrenkiella parvula
Sp4g16220 Schrenkiella parvula
TAR624G0603 Trochodendron aralioides
TAR626G1897 Trochodendron aralioides
THA.LOC104812301 Tarenaya hassleriana
THA.LOC104814224 Tarenaya hassleriana
Thecc.06G183500 Theobroma cacao
Thhalv10003427m.g Eutrema salsugineum
Thhalv10009086m.g Eutrema salsugineum
Thhalv10017461m.g Eutrema salsugineum
TPR.G16501 Trifolium pratense
TWI38G1513 Tripterygium wilfordii
TWI38G1867 Tripterygium wilfordii
unitig_749.g13657 Utricularia gibba
vmacro15923 Vaccinium macrocarpon
VMungo0540G1118 Vigna mungo

User provided reference genes

Program Settings