Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p43510 Brassica napus
A07p08160 Brassica napus
Aa31LG8G10920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5018 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis
Actinidia11385 Actinidia chinensis
Actinidia11386 Actinidia chinensis
Actinidia39943 Actinidia chinensis
Ah.07g204120 Amaranthus hybridus
Ah.14g082010 Amaranthus hybridus
AL3G39530 Arabidopsis lyrata
AL5G30090 Arabidopsis lyrata
Aqoxy1G00125 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea
AT3G23980 Arabidopsis thaliana
ATR0580G379 Amborella trichopoda
Atru.chr4.1847 Acer truncatum
AUR62002607 Chenopodium quinoa
AUR62030025 Chenopodium quinoa
BcaB03g14597 Brassica carinata
BcaB04g20394 Brassica carinata
BcaB06g26600 Brassica carinata
BcaC01g03342 Brassica carinata
BcaC06g35665 Brassica carinata
BcaC06g35667 Brassica carinata
BolC3t17608H Brassica oleracea
BolC7t41696H Brassica oleracea
BraA03t13490Z Brassica rapa
BraA07t28601Z Brassica rapa
C03p53470 Brassica napus
C07p12290 Brassica napus
C07p12320 Brassica napus
CAN.G566.2 Capsicum annuum
CAN.G812.46 Capsicum annuum
CANSAT78G2050 Cannabis sativa
CARHR100260 Cardamine hirsuta
Carub.0003s2454 Capsella rubella
Ca_11787_v3 Cicer arietinum L.
CBR_g38414 Chara braunii
Cc03_g07010 Coffea canephora
CDE04G0520 Ceratophyllum demersum
CDE04G1765 Ceratophyllum demersum
CDE07G1740 Ceratophyllum demersum
Cfa014840 Carpinus fangiana
Ciclev10004333m.g Citrus clementina
CiPaw.01G174500 Carya illinoinensis
CiPaw.02G103800 Carya illinoinensis
ClCG06G007410 Citrullus lanatus
Cpa.g.sc59.56 Carica papaya
Cpa.g.sc59.57 Carica papaya
Cre12.g514550 Chlamydomonas reinhardtii
CsaV3_2G012280 Cucumis sativus L.
CSS0020381 Camellia sinensis var. sinensis
CSS0021427 Camellia sinensis var. sinensis
DCAR_027362 Daucus carota
Dinv27142 Davidia involucrata
Dinv29776 Davidia involucrata
Duzib151G0300 Durio zibethinus
Duzib212G0614 Durio zibethinus
ECA234G0302 Erigeron canadensis
EL10Ac3g06305 Beta vulgaris
Eucgr.H00111 Eucalyptus grandis
FAN07G2212 Fragaria x ananassa
FAN12G2520 Fragaria x ananassa
FAN22G0313 Fragaria x ananassa
FvH4_4g05311 Fragaria vesca
Glyma.10G128300 Glycine max
Glyma.10G128350 Glycine max
Glyma.20G079600 Glycine max
Gohir.A02G025400 Gossypium hirsutum
Gohir.A02G090400 Gossypium hirsutum
Gohir.A03G037650 Gossypium hirsutum
Gohir.A04G093800 Gossypium hirsutum
Gohir.A09G201200 Gossypium hirsutum
Gohir.A11G239380 Gossypium hirsutum
Gohir.D01G060866 Gossypium hirsutum
Gohir.D01G077750 Gossypium hirsutum
Gohir.D02G032600 Gossypium hirsutum
Gohir.D02G158575 Gossypium hirsutum
Gohir.D03G086101 Gossypium hirsutum
Gohir.D04G051401 Gossypium hirsutum
Gohir.D04G116566 Gossypium hirsutum
Gohir.D06G084232 Gossypium hirsutum
Gohir.D06G132966 Gossypium hirsutum
Gohir.D08G165950 Gossypium hirsutum
Gohir.D08G175500 Gossypium hirsutum
Gohir.D08G229150 Gossypium hirsutum
Gohir.D09G057732 Gossypium hirsutum
Gohir.D09G195400 Gossypium hirsutum
Gohir.D10G146700 Gossypium hirsutum
Gohir.D11G226200 Gossypium hirsutum
Gohir.D11G243366 Gossypium hirsutum
Gohir.D12G066350 Gossypium hirsutum
Gorai.004G113400 Gossypium raimondii
Gorai.005G036000 Gossypium raimondii
Gorai.006G218800 Gossypium raimondii
Gorai.007G071000 Gossypium raimondii
Gorai.007G244100 Gossypium raimondii
Gorai.009G342200 Gossypium raimondii
Gorai.010G154900 Gossypium raimondii
Gorai.011G164000 Gossypium raimondii
Gorai.013G043600 Gossypium raimondii
GSVIVG01029001001 Vitis vinifera
HanXRQChr10g0311151 Helianthus annuus
HanXRQChr12g0359881 Helianthus annuus
Haze_11526 Corylus avellana
Hma1.2p1_0112F.1_g055040 Hydrangea macrophylla
Hma1.2p1_0112F.1_g055050 Hydrangea macrophylla
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla
HPP92_014197 Vanilla planifolia
HPP92_026453 Vanilla planifolia
HPP92_026454 Vanilla planifolia
Hund12227 Selenicereus undatus
Hund12233 Selenicereus undatus
Lalb_Chr01g0011261 Lupinus albus
Lalb_Chr03g0036821 Lupinus albus
Lalb_Chr19g0128621 Lupinus albus
Lj3A630T50 Lonicera japonica
Lj6A641G44 Lonicera japonica
Lj6g0006649 Lotus japonicus
Lsat_1_v5_gn_5_148361 Lactuca sativa
Manes.03G155400 Manihot esculenta
Manes.15G048200 Manihot esculenta
Mapoly0068s0063 Marchantia polymorpha
MBI04_g25319_MAGBIO Magnolia biondii
MBI05_g37047_MAGBIO Magnolia biondii
MD13G1227500 Malus domestica
MD16G1232700 Malus domestica
Medtr1g046350 Medicago truncatula
MELO3C023064.2 Cucumis melo
Migut.G00600 Erythranthe guttata
MSTRG.4198 Avicennia marina
Nitab4.5_0000451g0120 Nicotiana tabacum
Nitab4.5_0001998g0040 Nicotiana tabacum
Nitab4.5_0002738g0080 Nicotiana tabacum
Nitab4.5_0003287g0020 Nicotiana tabacum
Nn1g03063 Nelumbo nucifera
Nn3g19840 Nelumbo nucifera
Oeu012942.2 Olea europaea
Oeu023150.1 Olea europaea
Oeu023151.1 Olea europaea
Os01g0911800 Oryza sativa ssp. japonica
Peaxi162Scf00047g00163 Petunia axillaris
Peaxi162Scf01007g00014 Petunia axillaris
PGR142G1422 Punica granatum
PGSC0003DMG402011586 Solanum tuberosum
Phvul.007G238700 Phaseolus vulgaris
Potri.008G174800 Populus trichocarpa
Potri.010G062000 Populus trichocarpa
Pp3c20_15710 Physcomitrium patens
Pp3c23_8100 Physcomitrium patens
Pp3c24_10590 Physcomitrium patens
Prupe.1G054700 Prunus persica
Psat6g109680 Pisum sativum
PSO764G0031 Papaver somniferum
PSO832G4023 Papaver somniferum
QL06p022355 Quercus lobata
RcHm_v2.0_Chr4g0396341 Rosa chinensis
Rhsim02G0049400 Rhododendron simsii
Sabra08G0133300 Salix brachista
Sc19g0002160 Simmondsia chinensis
Sed0002438 Sechium edule
Sed0008500 Sechium edule
SEGI_10173 Sequoiadendron giganteum
SGA_v2.0_scaffold57G20181 Striga asiatica
SHI00869 Sapria himalayana
SMO116G0337 Selaginella moellendorffii
Solyc09g091120.3 Solanum lycopersicum
Solyc12g097070.3 Solanum lycopersicum
Sopen09g034100 Solanum pennellii
Sopen12g032860 Solanum pennellii
Sp3g21980 Schrenkiella parvula
TAR362G1171 Trochodendron aralioides
TAR365G0848 Trochodendron aralioides
TAR633G2428 Trochodendron aralioides
THA.LOC104804570 Tarenaya hassleriana
THA.LOC104821624 Tarenaya hassleriana
Thecc.04G217100 Theobroma cacao
Thhalv10002420m.g Eutrema salsugineum
TPR.G23641 Trifolium pratense
TWI09G0941 Tripterygium wilfordii
TWI73G0229 Tripterygium wilfordii
unitig_748.g7341 Utricularia gibba
vmacro15908 Vaccinium macrocarpon
VMungo0720G2372 Vigna mungo
Zm00001eb143670 Zea mays
Zm00001eb365010 Zea mays

User provided reference genes

Program Settings