Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05900 Brassica napus
A02p39740 Brassica napus
A08p18170 Brassica napus
Aa31LG2G19380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1095 Anthoceros agrestis
Actinidia13260 Actinidia chinensis
Actinidia14624 Actinidia chinensis
Actinidia15690 Actinidia chinensis
Ah.10g026040 Amaranthus hybridus
Ah.10g026060 Amaranthus hybridus
Ah.10g026070 Amaranthus hybridus
AL6G37230 Arabidopsis lyrata
AL7G19340 Arabidopsis lyrata
Aqoxy7G02033 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8QVL0P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DTD3YS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J127JW Arachis hypogaea
AT4G32470 Arabidopsis thaliana
AT5G25450 Arabidopsis thaliana
ATR0737G081 Amborella trichopoda
Atru.chr7.2370 Acer truncatum
AUR62024869 Chenopodium quinoa
AUR62030679 Chenopodium quinoa
BcaB03g12747 Brassica carinata
BcaC01g01021 Brassica carinata
BcaC03g17902 Brassica carinata
BcaC09g52038 Brassica carinata
BolC1t00646H Brassica oleracea
BolC2t12016H Brassica oleracea
BolC3t21033H Brassica oleracea
BraA01t00557Z Brassica rapa
BraA02t08939Z Brassica rapa
BraA08t33770Z Brassica rapa
C01p06520 Brassica napus
C02p59530 Brassica napus
C03p87330 Brassica napus
CAN.G536.8 Capsicum annuum
CAN.G538.10 Capsicum annuum
CAN.G98.17 Capsicum annuum
CANSAT78G1909 Cannabis sativa
CARHR115730 Cardamine hirsuta
CARHR187770 Cardamine hirsuta
CARHR240390 Cardamine hirsuta
Carub.0006s2330 Capsella rubella
Carub.0007s0811 Capsella rubella
Ca_12928_v3 Cicer arietinum L.
CBR_g8907 Chara braunii
Cc11_g01730 Coffea canephora
CDE10G0654 Ceratophyllum demersum
CDE10G0960 Ceratophyllum demersum
Cfa013184 Carpinus fangiana
Ciclev10009887m.g Citrus clementina
CiPaw.03G239400 Carya illinoinensis
CiPaw.07G220400 Carya illinoinensis
CiPaw.08G013800 Carya illinoinensis
ClCG05G017090 Citrullus lanatus
COL.COLO4_23986 Corchorus olitorius
Cpa.g.sc1755.1 Carica papaya
Cre06.g262700 Chlamydomonas reinhardtii
CsaV3_3G046570 Cucumis sativus L.
CSS0004095 Camellia sinensis var. sinensis
CSS0039202 Camellia sinensis var. sinensis
DCAR_003029 Daucus carota
DCAR_029199 Daucus carota
Dinv11613 Davidia involucrata
Dinv30181 Davidia involucrata
Duzib150G1042 Durio zibethinus
Duzib168G1482 Durio zibethinus
Duzib187G0128 Durio zibethinus
ECA236G1938 Erigeron canadensis
ECA240G2460 Erigeron canadensis
EL10Ac2g02580 Beta vulgaris
Eucgr.C01792 Eucalyptus grandis
Eucgr.C02813 Eucalyptus grandis
FAN15G2106 Fragaria x ananassa
FAN20G0596 Fragaria x ananassa
FAN24G2732 Fragaria x ananassa
FAN27G2400 Fragaria x ananassa
FvH4_2g29690 Fragaria vesca
Glyma.14G126300 Glycine max
Glyma.17G208000 Glycine max
Gohir.1Z049369 Gossypium hirsutum
Gohir.A02G112400 Gossypium hirsutum
Gohir.A13G206900 Gossypium hirsutum
Gohir.D03G071300 Gossypium hirsutum
Gohir.D13G211500 Gossypium hirsutum
Gorai.013G110700 Gossypium raimondii
Gorai.013G241600 Gossypium raimondii
GSVIVG01035802001 Vitis vinifera
HanXRQChr03g0062131 Helianthus annuus
HanXRQChr05g0142301 Helianthus annuus
HanXRQChr06g0179891 Helianthus annuus
HanXRQChr06g0182081 Helianthus annuus
Haze_21577 Corylus avellana
Hma1.2p1_0000F.1_g000840 Hydrangea macrophylla
HPP92_000819 Vanilla planifolia
HPP92_001612 Vanilla planifolia
Hund03017 Selenicereus undatus
Lalb_Chr08g0243901 Lupinus albus
Lalb_Chr23g0268801 Lupinus albus
Lj1g0024003 Lotus japonicus
Lj7A717G55 Lonicera japonica
Lsat_1_v5_gn_5_31481 Lactuca sativa
Lsat_1_v5_gn_7_42641 Lactuca sativa
Lsat_1_v5_gn_8_57600 Lactuca sativa
Manes.03G017600 Manihot esculenta
Manes.16G119000 Manihot esculenta
Mapoly0020s0108 Marchantia polymorpha
MBI01_g13086_MAGBIO Magnolia biondii
MBI04_g38347_MAGBIO Magnolia biondii
MBI04_g38349_MAGBIO Magnolia biondii
MCO05G573 Micromonas commoda
MD08G1143000 Malus domestica
MD15G1119900 Malus domestica
MD15G1120200 Malus domestica
Medtr1g011880 Medicago truncatula
MELO3C003682.2 Cucumis melo
Migut.A00309 Erythranthe guttata
Migut.E01481 Erythranthe guttata
MSTRG.11762 Avicennia marina
MSTRG.13989 Avicennia marina
Nitab4.5_0000010g0100 Nicotiana tabacum
Nitab4.5_0006827g0010 Nicotiana tabacum
Nn2g11929 Nelumbo nucifera
Nn2g13042 Nelumbo nucifera
Nn7g35795 Nelumbo nucifera
Nn8g39358 Nelumbo nucifera
Oeu030075.1 Olea europaea
Oeu031576.1 Olea europaea
Oeu045199.1 Olea europaea
Os03g0806900 Oryza sativa ssp. japonica
Os07g0205000 Oryza sativa ssp. japonica
Os08g0246400 Oryza sativa ssp. japonica
Peaxi162Scf00341g00821 Petunia axillaris
Peaxi162Scf00361g00612 Petunia axillaris
PGR044G1161 Punica granatum
PGR044G1771 Punica granatum
PGSC0003DMG400029087 Solanum tuberosum
Phvul.001G121500 Phaseolus vulgaris
Potri.006G250000 Populus trichocarpa
Potri.018G031400 Populus trichocarpa
Pp3c10_14460 Physcomitrium patens
Pp3c25_1520 Physcomitrium patens
Pp3c6_18020 Physcomitrium patens
PRCOL_00006283 Prasinoderma coloniale
Prupe.1G472700 Prunus persica
Psat6g030080 Pisum sativum
PSO170G3425 Papaver somniferum
PSO455G0147 Papaver somniferum
QL02p023157 Quercus lobata
QL02p087302 Quercus lobata
RcHm_v2.0_Chr6g0298671 Rosa chinensis
Rhsim02G0194100 Rhododendron simsii
Sabra06G0195600 Salix brachista
Sabra18G0032500 Salix brachista
SalBow4G0188 Salvia bowleyana
SalBow8G5246 Salvia bowleyana
SalBow8G5369 Salvia bowleyana
Sc06g0000590 Simmondsia chinensis
Sc09g0008620 Simmondsia chinensis
Sed0001403 Sechium edule
Sed0003789 Sechium edule
SEGI_30503 Sequoiadendron giganteum
SGA_v2.0_scaffold169G38619 Striga asiatica
SGA_v2.0_scaffold18G08283 Striga asiatica
SGA_v2.0_scaffold22G09938 Striga asiatica
SMO169G0058 Selaginella moellendorffii
Solyc08g067020.4 Solanum lycopersicum
Sopen08g020960 Solanum pennellii
Sp4g05010 Schrenkiella parvula
Sp7g30260 Schrenkiella parvula
TAR625G0096 Trochodendron aralioides
TAR626G0665 Trochodendron aralioides
TAR636G0318 Trochodendron aralioides
THA.LOC104803827 Tarenaya hassleriana
Thecc.09G148600 Theobroma cacao
Thhalv10005137m.g Eutrema salsugineum
Thhalv10023759m.g Eutrema salsugineum
Thhalv10026575m.g Eutrema salsugineum
TPR.G15658 Trifolium pratense
TWI32G0136 Tripterygium wilfordii
TWI34G0954 Tripterygium wilfordii
unitig_32.g10929 Utricularia gibba
unitig_748.g8200 Utricularia gibba
vmacro05197 Vaccinium macrocarpon
VMungo0647G0605 Vigna mungo
Zm00001eb061560 Zea mays
Zm00001eb094460 Zea mays
Zm00001eb212550 Zea mays

User provided reference genes

Program Settings