Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16870 Brassica napus
A03p56130 Brassica napus
Aa31LG3G8800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis
Actinidia25889 Actinidia chinensis
Ah.07g206910 Amaranthus hybridus
AL7G27480 Arabidopsis lyrata
Aqoxy7G00296 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea
AT4G25610 Arabidopsis thaliana
ATR0672G001 Amborella trichopoda
ATR0680G428 Amborella trichopoda
Atru.chr1.420 Acer truncatum
AUR62015951 Chenopodium quinoa
AUR62021157 Chenopodium quinoa
BcaC06g32796 Brassica carinata
BcaC09g50754 Brassica carinata
BcaNung03703 Brassica carinata
BolC7t45931H Brassica oleracea
BraA03t14686Z Brassica rapa
C01p21150 Brassica napus
C07p54460 Brassica napus
CAN.G1175.16 Capsicum annuum
CANSAT21G2257 Cannabis sativa
CARHR233030 Cardamine hirsuta
Carub.0007s1537 Capsella rubella
Ca_10741_v3 Cicer arietinum L.
Ca_13872_v3 Cicer arietinum L.
Ca_27254_v3 Cicer arietinum L.
Cc02_g02700 Coffea canephora
CDE02G1538 Ceratophyllum demersum
CDE06G1616 Ceratophyllum demersum
Cfa016262 Carpinus fangiana
Ciclev10006582m.g Citrus clementina
CiPaw.05G264100 Carya illinoinensis
ClCG05G008170 Citrullus lanatus
COL.COLO4_28044 Corchorus olitorius
Cpa.g.sc107.76 Carica papaya
CsaV3_3G017260 Cucumis sativus L.
CSS0005394 Camellia sinensis var. sinensis
CSS0037833 Camellia sinensis var. sinensis
CSS0041965 Camellia sinensis var. sinensis
DCAR_020260 Daucus carota
DCAR_029574 Daucus carota
Dinv28414 Davidia involucrata
Dinv35227 Davidia involucrata
Duzib068G0520 Durio zibethinus
Duzib084G0771 Durio zibethinus
Duzib205G1576 Durio zibethinus
ECA233G2749 Erigeron canadensis
ECA233G5443 Erigeron canadensis
ECA238G3668 Erigeron canadensis
EL10Ac3g05599 Beta vulgaris
Eucgr.A02765 Eucalyptus grandis
Eucgr.E00978 Eucalyptus grandis
Eucgr.L00411 Eucalyptus grandis
FAN01G0376 Fragaria x ananassa
FAN01G2639 Fragaria x ananassa
FAN03G0953 Fragaria x ananassa
FAN03G3125 Fragaria x ananassa
FAN06G0571 Fragaria x ananassa
FAN06G1666 Fragaria x ananassa
FAN06G2167 Fragaria x ananassa
FAN10G0313 Fragaria x ananassa
FAN10G2476 Fragaria x ananassa
FvH4_7g29860 Fragaria vesca
Glyma.09G136202 Glycine max
Glyma.10G233400 Glycine max
Glyma.16G181700 Glycine max
Glyma.20G161000 Glycine max
Gohir.A08G098700 Gossypium hirsutum
Gohir.A12G256000 Gossypium hirsutum
Gohir.D08G110300 Gossypium hirsutum
Gohir.D12G257400 Gossypium hirsutum
Gorai.004G117900 Gossypium raimondii
Gorai.008G275600 Gossypium raimondii
GSVIVG01028908001 Vitis vinifera
HanXRQChr14g0462361 Helianthus annuus
Haze_00014 Corylus avellana
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla
HPP92_001476 Vanilla planifolia
HPP92_001477 Vanilla planifolia
HPP92_001484 Vanilla planifolia
HPP92_011473 Vanilla planifolia
HPP92_027487 Vanilla planifolia
HPP92_028446 Vanilla planifolia
HPP92_028450 Vanilla planifolia
Hund04768 Selenicereus undatus
Lalb_Chr02g0141141 Lupinus albus
Lalb_Chr03g0034731 Lupinus albus
Lalb_Chr06g0161221 Lupinus albus
Lalb_Chr19g0130741 Lupinus albus
Lalb_Chr21g0305131 Lupinus albus
Lj1C1001T6 Lonicera japonica
Lj2g0008392 Lotus japonicus
Lj5g0006318 Lotus japonicus
Lsat_1_v5_gn_9_55160 Lactuca sativa
Manes.06G149800 Manihot esculenta
Manes.14G024700 Manihot esculenta
Mapoly0003s0245 Marchantia polymorpha
MBI17_g24687_MAGBIO Magnolia biondii
MBI18_g29423_MAGBIO Magnolia biondii
MD01G1205100 Malus domestica
MD07G1273500 Malus domestica
Medtr1g100810 Medicago truncatula
Medtr6g053660 Medicago truncatula
MELO3C006924.2 Cucumis melo
Migut.F00325 Erythranthe guttata
Migut.F01102 Erythranthe guttata
MSTRG.27103 Avicennia marina
MSTRG.82 Avicennia marina
Nitab4.5_0000080g0130 Nicotiana tabacum
Nitab4.5_0000084g0130 Nicotiana tabacum
Nitab4.5_0001951g0040 Nicotiana tabacum
Nitab4.5_0004439g0040 Nicotiana tabacum
Nn1g01542 Nelumbo nucifera
Nn6g33408 Nelumbo nucifera
Oeu004107.1 Olea europaea
Oeu035062.1 Olea europaea
Oeu049780.1 Olea europaea
Oeu061653.1 Olea europaea
Os09g0570200 Oryza sativa ssp. japonica
Peaxi162Scf00444g00425 Petunia axillaris
Peaxi162Scf00848g00116 Petunia axillaris
PGR042G2663 Punica granatum
PGR142G2556 Punica granatum
PGSC0003DMG400015791 Solanum tuberosum
PGSC0003DMG400029919 Solanum tuberosum
Phvul.004G113400 Phaseolus vulgaris
Phvul.007G072400 Phaseolus vulgaris
Potri.012G143200 Populus trichocarpa
Potri.015G146300 Populus trichocarpa
Pp3c10_4090 Physcomitrium patens
Pp3c10_4110 Physcomitrium patens
Prupe.2G297500 Prunus persica
Psat0s4127g0040 Pisum sativum
Psat6g197120 Pisum sativum
PSO478G3353 Papaver somniferum
PSO782G4415 Papaver somniferum
RcHm_v2.0_Chr1g0377821 Rosa chinensis
Rhsim03G0188200 Rhododendron simsii
Rhsim05G0045800 Rhododendron simsii
RhsimUnG0140300 Rhododendron simsii
Sabra12G0107600 Salix brachista
Sabra15G0155500 Salix brachista
SalBow4G0890 Salvia bowleyana
Sc13g0008850 Simmondsia chinensis
Sc19g0001390 Simmondsia chinensis
Sed0000543 Sechium edule
Sed0014313 Sechium edule
SEGI_03018 Sequoiadendron giganteum
SEGI_20458 Sequoiadendron giganteum
SEGI_33334 Sequoiadendron giganteum
SGA_v2.0_scaffold60G21078 Striga asiatica
SHI13766 Sapria himalayana
SMO347G0135 Selaginella moellendorffii
SMO356G0700 Selaginella moellendorffii
Solyc03g025440.3 Solanum lycopersicum
Solyc06g036060.4 Solanum lycopersicum
Sopen03g004280 Solanum pennellii
Sopen06g011810 Solanum pennellii
Sp7g23640 Schrenkiella parvula
TAR374G0267 Trochodendron aralioides
TAR375G0013 Trochodendron aralioides
TAR375G0355 Trochodendron aralioides
TAR375G0736 Trochodendron aralioides
TAR629G0048 Trochodendron aralioides
TAR636G0984 Trochodendron aralioides
TAR636G1367 Trochodendron aralioides
THA.LOC104811971 Tarenaya hassleriana
THA.LOC104825103 Tarenaya hassleriana
Thecc.03G180000 Theobroma cacao
Thhalv10024755m.g Eutrema salsugineum
TPR.G26995 Trifolium pratense
TPR.G8172 Trifolium pratense
TWI14G0197 Tripterygium wilfordii
TWI23G0117 Tripterygium wilfordii
TWI39G1025 Tripterygium wilfordii
unitig_0.g459 Utricularia gibba
unitig_22.g5223 Utricularia gibba
vmacro06655 Vaccinium macrocarpon
VMungo0464G2114 Vigna mungo
VMungo0720G1546 Vigna mungo
Zm00001eb095880 Zea mays
Zm00001eb224460 Zea mays

User provided reference genes

Program Settings