Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p07780 Brassica napus
Aa31sc29G80 Aethionema arabicum
Aa31sc99G150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1977 Anthoceros agrestis
Actinidia09421 Actinidia chinensis
Actinidia32682 Actinidia chinensis
Ah.14g082090 Amaranthus hybridus
AL3G40070 Arabidopsis lyrata
Aqoxy3G01597 Aquilegia oxysepala
Aqoxy7G01646 Aquilegia oxysepala
Aqoxy7G01647 Aquilegia oxysepala
Aqoxy7G01648 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EYQI1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VSCA53 Arachis hypogaea
AT3G24530 Arabidopsis thaliana
ATR0315G144 Amborella trichopoda
Atru.chr7.1358 Acer truncatum
AUR62010986 Chenopodium quinoa
AUR62021495 Chenopodium quinoa
BcaB03g14578 Brassica carinata
BcaB06g26656 Brassica carinata
BcaC06g35719 Brassica carinata
BolC7t41643H Brassica oleracea
BraA07t28569Z Brassica rapa
C07p11700 Brassica napus
CAN.G1529.8 Capsicum annuum
CARHR100670 Cardamine hirsuta
Carub.0003s2492 Capsella rubella
Ca_03977_v3 Cicer arietinum L.
CBR_g46749 Chara braunii
Cc00_g28820 Coffea canephora
Cc06_g09720 Coffea canephora
CDE02G1223 Ceratophyllum demersum
CDE02G2554 Ceratophyllum demersum
CDE08G0484 Ceratophyllum demersum
Cfa021562 Carpinus fangiana
Cfa024833 Carpinus fangiana
Ciclev10008142m.g Citrus clementina
CiPaw.03G231600 Carya illinoinensis
CiPaw.04G163500 Carya illinoinensis
ClCG05G007150 Citrullus lanatus
COL.COLO4_34873 Corchorus olitorius
Cpa.g.sc23.101 Carica papaya
Cre02.g105300 Chlamydomonas reinhardtii
Cre04.g218900 Chlamydomonas reinhardtii
Cre04.g219000 Chlamydomonas reinhardtii
CsaV3_3G015870 Cucumis sativus L.
CSS0004511 Camellia sinensis var. sinensis
CSS0016063 Camellia sinensis var. sinensis
CSS0027044 Camellia sinensis var. sinensis
CSS0042262 Camellia sinensis var. sinensis
CSS0049361 Camellia sinensis var. sinensis
DCAR_028707 Daucus carota
Dinv30495 Davidia involucrata
Dinv36637 Davidia involucrata
Dinv41608 Davidia involucrata
Duzib168G1477 Durio zibethinus
Duzib187G1605 Durio zibethinus
ECA240G2782 Erigeron canadensis
EL10Ac8g18488 Beta vulgaris
Eucgr.C01036 Eucalyptus grandis
FAN19G2426 Fragaria x ananassa
FAN23G2072 Fragaria x ananassa
FAN26G0011 Fragaria x ananassa
FAN28G1412 Fragaria x ananassa
FvH4_1g04710 Fragaria vesca
Glyma.07G085800 Glycine max
Glyma.09G191100 Glycine max
Gohir.A07G006000 Gossypium hirsutum
Gohir.A13G196700 Gossypium hirsutum
Gohir.D07G006000 Gossypium hirsutum
Gohir.D13G202000 Gossypium hirsutum
Gorai.001G005600 Gossypium raimondii
Gorai.013G230900 Gossypium raimondii
GSVIVG01015385001 Vitis vinifera
HanXRQChr09g0239661 Helianthus annuus
HanXRQChr10g0282301 Helianthus annuus
HanXRQChr10g0318561 Helianthus annuus
HanXRQChr16g0522441 Helianthus annuus
Haze_25724 Corylus avellana
Haze_25731 Corylus avellana
Hma1.2p1_0001F.1_g001560 Hydrangea macrophylla
Hma1.2p1_0018F.1_g013590 Hydrangea macrophylla
Hma1.2p1_1455F.1_g284390 Hydrangea macrophylla
HPP92_005264 Vanilla planifolia
Hund09208 Selenicereus undatus
Hund26199 Selenicereus undatus
Lalb_Chr14g0371541 Lupinus albus
Lalb_Chr24g0397591 Lupinus albus
Lj2g0018985 Lotus japonicus
Lj7A651T32 Lonicera japonica
Lsat_1_v5_gn_1_124140 Lactuca sativa
Lsat_1_v5_gn_3_101741 Lactuca sativa
Lsat_1_v5_gn_7_40780 Lactuca sativa
Manes.03G021400 Manihot esculenta
Manes.16G115500 Manihot esculenta
MCO01G086 Micromonas commoda
MD02G1046000 Malus domestica
MD15G1184200 Malus domestica
Medtr6g088470 Medicago truncatula
MELO3C006786.2 Cucumis melo
Migut.G00929 Erythranthe guttata
Migut.I00952 Erythranthe guttata
Migut.J01103 Erythranthe guttata
Migut.J01104 Erythranthe guttata
Migut.J01110 Erythranthe guttata
Migut.J01111 Erythranthe guttata
Migut.J01112 Erythranthe guttata
Migut.J01113 Erythranthe guttata
Migut.J01116 Erythranthe guttata
Migut.J01117 Erythranthe guttata
Migut.J01118 Erythranthe guttata
Migut.J01119 Erythranthe guttata
Migut.J01147 Erythranthe guttata
Migut.J01155 Erythranthe guttata
MSTRG.19588 Avicennia marina
MSTRG.22673 Avicennia marina
Nitab4.5_0000114g0080 Nicotiana tabacum
Nitab4.5_0002904g0090 Nicotiana tabacum
Nitab4.5_0004562g0010 Nicotiana tabacum
Nitab4.5_0005947g0020 Nicotiana tabacum
Nn2g11728 Nelumbo nucifera
Nn8g39160 Nelumbo nucifera
Nn8g39164 Nelumbo nucifera
Nn8g39165 Nelumbo nucifera
Nn8g39167 Nelumbo nucifera
Nn8g39168 Nelumbo nucifera
Nn8g39169 Nelumbo nucifera
Oeu023080.1 Olea europaea
Oeu044981.1 Olea europaea
Oeu064901.1 Olea europaea
Os02g0266300 Oryza sativa ssp. japonica
Peaxi162Scf00231g00033 Petunia axillaris
Peaxi162Scf00546g00023 Petunia axillaris
PGR142G3711 Punica granatum
PGSC0003DMG400000311 Solanum tuberosum
PGSC0003DMG400030220 Solanum tuberosum
Phvul.004G163800 Phaseolus vulgaris
Potri.006G158600 Populus trichocarpa
Potri.018G081000 Populus trichocarpa
Prupe.7G232000 Prunus persica
Psat1g042960 Pisum sativum
PSO782G0111 Papaver somniferum
PSO832G1684 Papaver somniferum
QL02p085200 Quercus lobata
RcHm_v2.0_Chr2g0090311 Rosa chinensis
RhsimUnG0196500 Rhododendron simsii
Sabra06G0123900 Salix brachista
Sabra18G0068200 Salix brachista
SalBow1G6854 Salvia bowleyana
SalBow6G0008 Salvia bowleyana
SalBow6G0300 Salvia bowleyana
SalBow6G1987 Salvia bowleyana
SalBow6G2522 Salvia bowleyana
SalBow6G3329 Salvia bowleyana
SalBow6G3888 Salvia bowleyana
SalBow6G4774 Salvia bowleyana
SalBow6G4876 Salvia bowleyana
SalBow6G5466 Salvia bowleyana
SalBow6G6039 Salvia bowleyana
Sc08g0007530 Simmondsia chinensis
Sed0008991 Sechium edule
Sed0020967 Sechium edule
SEGI_35600 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05155 Striga asiatica
SGA_v2.0_scaffold137G35130 Striga asiatica
SGA_v2.0_scaffold30G12371 Striga asiatica
SHI02763 Sapria himalayana
SMO367G0606 Selaginella moellendorffii
Solyc07g023990.3 Solanum lycopersicum
Solyc12g007100.2 Solanum lycopersicum
Sopen07g012210 Solanum pennellii
Sopen12g003080 Solanum pennellii
Sp3g22320 Schrenkiella parvula
TAR376G0449 Trochodendron aralioides
TAR624G1386 Trochodendron aralioides
TAR636G2961 Trochodendron aralioides
THA.LOC104808764 Tarenaya hassleriana
Thecc.09G109600 Theobroma cacao
Thhalv10002506m.g Eutrema salsugineum
TPR.G25311 Trifolium pratense
TWI34G1138 Tripterygium wilfordii
TWI63G0694 Tripterygium wilfordii
unitig_22.g6628 Utricularia gibba
vmacro06217 Vaccinium macrocarpon
vmacro06218 Vaccinium macrocarpon
vmacro10501 Vaccinium macrocarpon
VMungo0464G0841 Vigna mungo
Zm00001eb204000 Zea mays

User provided reference genes

Program Settings