Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03190 Brassica napus
A09p50260 Brassica napus
Aa31LG1G13790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis
Actinidia09310 Actinidia chinensis
Actinidia17229 Actinidia chinensis
Actinidia22794 Actinidia chinensis
Ah.02g117470 Amaranthus hybridus
Ah.03g134750 Amaranthus hybridus
AL3G11670 Arabidopsis lyrata
AL5G38900 Arabidopsis lyrata
Aqoxy7G03372 Aquilegia oxysepala
Aqoxy7G03834 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea
AT3G02370 Arabidopsis thaliana
AT3G57360 Arabidopsis thaliana
ATR0829G008 Amborella trichopoda
AUR62029731 Chenopodium quinoa
AUR62032829 Chenopodium quinoa
BcaB02g08320 Brassica carinata
BcaB03g14131 Brassica carinata
BcaC01g05568 Brassica carinata
BcaC02g09930 Brassica carinata
BcaC03g13974 Brassica carinata
BcaC07g40390 Brassica carinata
BcaC09g48296 Brassica carinata
BcaNung07092 Brassica carinata
BcaNung07094 Brassica carinata
BolC1t05129H Brassica oleracea
BolC2t07266H Brassica oleracea
BolC3t14871H Brassica oleracea
BolC4t25063H Brassica oleracea
BolC8t50886H Brassica oleracea
BolC8t50888H Brassica oleracea
BraA04t16040Z Brassica rapa
BraA09t40476Z Brassica rapa
C02p42240 Brassica napus
C03p24820 Brassica napus
C04p35070 Brassica napus
C08p32750 Brassica napus
C08p32770 Brassica napus
CAN.G641.26 Capsicum annuum
CANSAT80G2682 Cannabis sativa
CARHR076350 Cardamine hirsuta
CARHR167560 Cardamine hirsuta
Carub.0001s3481 Capsella rubella
Carub.0005s2421 Capsella rubella
Ca_08432_v3 Cicer arietinum L.
Cc04_g15140 Coffea canephora
Cc06_g17860 Coffea canephora
CDE09G0671 Ceratophyllum demersum
Cfa015703 Carpinus fangiana
Cfa016791 Carpinus fangiana
Ciclev10005938m.g Citrus clementina
CiPaw.09G039700 Carya illinoinensis
ClCG04G006280 Citrullus lanatus
ClCG10G015700 Citrullus lanatus
COL.COLO4_19254 Corchorus olitorius
COL.COLO4_22302 Corchorus olitorius
Cpa.g.sc182.7 Carica papaya
CsaV3_3G040730 Cucumis sativus L.
CsaV3_4G027280 Cucumis sativus L.
CSS0020602 Camellia sinensis var. sinensis
CSS0036075 Camellia sinensis var. sinensis
CSS0050265 Camellia sinensis var. sinensis
DCAR_030722 Daucus carota
Dinv02795 Davidia involucrata
Dinv02797 Davidia involucrata
Dinv39651 Davidia involucrata
Duzib093G1009 Durio zibethinus
Duzib128G0868 Durio zibethinus
ECA236G0894 Erigeron canadensis
EL10Ac6g13255 Beta vulgaris
Eucgr.A02317 Eucalyptus grandis
Eucgr.A02319 Eucalyptus grandis
Eucgr.A02322 Eucalyptus grandis
Eucgr.B02734 Eucalyptus grandis
FAN02G1760 Fragaria x ananassa
FvH4_6g24380 Fragaria vesca
Glyma.03G134401 Glycine max
Glyma.07G129400 Glycine max
Glyma.19G136600 Glycine max
Gohir.A01G194000 Gossypium hirsutum
Gohir.D01G184300 Gossypium hirsutum
Gorai.002G227800 Gossypium raimondii
GSVIVG01033242001 Vitis vinifera
GSVIVG01033244001 Vitis vinifera
GSVIVG01033245001 Vitis vinifera
HanXRQChr04g0113101 Helianthus annuus
Haze_19817 Corylus avellana
Haze_19820 Corylus avellana
HPP92_020032 Vanilla planifolia
Hund15698 Selenicereus undatus
Hund23474 Selenicereus undatus
Lalb_Chr20g0110641 Lupinus albus
Lj1A1127T48 Lonicera japonica
Lj1A1128T58 Lonicera japonica
Lj1C1128T4 Lonicera japonica
Lj1g0003709 Lotus japonicus
Lj2A386T88 Lonicera japonica
Lj6g0010730 Lotus japonicus
Manes.04G104200 Manihot esculenta
Mapoly0007s0121 Marchantia polymorpha
Mapoly0119s0049 Marchantia polymorpha
MBI16_g21161_MAGBIO Magnolia biondii
MD12G1080400 Malus domestica
MD14G1076600 Malus domestica
Medtr8g090105 Medicago truncatula
MELO3C025231.2 Cucumis melo
MELO3C030712.2 Cucumis melo
Migut.B00971 Erythranthe guttata
Migut.K00098 Erythranthe guttata
MSTRG.26129 Avicennia marina
Nitab4.5_0000082g0130 Nicotiana tabacum
Nitab4.5_0000082g0220 Nicotiana tabacum
Nitab4.5_0000912g0130 Nicotiana tabacum
Nitab4.5_0001598g0060 Nicotiana tabacum
Nitab4.5_0004416g0060 Nicotiana tabacum
Nitab4.5_0010316g0020 Nicotiana tabacum
Nn1g01643 Nelumbo nucifera
Nn2g10440 Nelumbo nucifera
Nn8g39441 Nelumbo nucifera
Oeu008170.1 Olea europaea
Oeu023123.1 Olea europaea
Os09g0504800 Oryza sativa ssp. japonica
Peaxi162Scf00002g03215 Petunia axillaris
Peaxi162Scf00059g01812 Petunia axillaris
Peaxi162Scf00244g00019 Petunia axillaris
PGR004G2683 Punica granatum
PGSC0003DMG400008168 Solanum tuberosum
PGSC0003DMG400011936 Solanum tuberosum
PGSC0003DMG400013536 Solanum tuberosum
Phvul.007G088100 Phaseolus vulgaris
Phvul.008G158112 Phaseolus vulgaris
Potri.017G142200 Populus trichocarpa
Pp3c27_5400 Physcomitrium patens
Pp3c3_37380 Physcomitrium patens
Prupe.5G048800 Prunus persica
Prupe.7G055000 Prunus persica
Psat3g074360 Pisum sativum
Psat7g055720 Pisum sativum
PSO210G2319 Papaver somniferum
PSO210G3983 Papaver somniferum
PSO339G0740 Papaver somniferum
PSO339G0745 Papaver somniferum
PSO339G4790 Papaver somniferum
PSO339G6630 Papaver somniferum
PSO648G0079 Papaver somniferum
QL07p002858 Quercus lobata
QL07p002898 Quercus lobata
QL07p002913 Quercus lobata
QL11p026785 Quercus lobata
RcHm_v2.0_Chr1g0361791 Rosa chinensis
RcHm_v2.0_Chr3g0483371 Rosa chinensis
Rhsim04G0105800 Rhododendron simsii
Sabra17G0119100 Salix brachista
SalBow1G2865 Salvia bowleyana
Sc04g0007910 Simmondsia chinensis
Sed0024079 Sechium edule
SEGI_02185 Sequoiadendron giganteum
SEGI_36865 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00588 Striga asiatica
SGA_v2.0_scaffold94G28492 Striga asiatica
SHI13547 Sapria himalayana
SMO364G0364 Selaginella moellendorffii
Solyc03g096220.3 Solanum lycopersicum
Solyc10g079310.2 Solanum lycopersicum
Sopen03g026320 Solanum pennellii
Sopen03g026330 Solanum pennellii
Sopen10g029960 Solanum pennellii
Sp5g05240 Schrenkiella parvula
TAR369G0285 Trochodendron aralioides
TAR369G0664 Trochodendron aralioides
THA.LOC104802043 Tarenaya hassleriana
Thecc.05G151100 Theobroma cacao
Thhalv10006455m.g Eutrema salsugineum
Thhalv10008553m.g Eutrema salsugineum
Thhalv10009639m.g Eutrema salsugineum
Thhalv10009908m.g Eutrema salsugineum
TPR.G18234 Trifolium pratense
TPR.G6202 Trifolium pratense
TWI53G1732 Tripterygium wilfordii
TWI74G0690 Tripterygium wilfordii
unitig_52.g17667 Utricularia gibba
vmacro09060 Vaccinium macrocarpon
VMungo1309G0648 Vigna mungo
VMungo1383G3573 Vigna mungo
Zm00001eb102310 Zea mays
Zm00001eb317610 Zea mays

User provided reference genes

Program Settings