Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p31960 Brassica napus
A09p00050 Brassica napus
Aa31LG5G730 Aethionema arabicum
Aa31LG5G740 Aethionema arabicum
Actinidia02822 Actinidia chinensis
Actinidia02823 Actinidia chinensis
Actinidia08582 Actinidia chinensis
Actinidia10062 Actinidia chinensis
Actinidia18539 Actinidia chinensis
Actinidia20152 Actinidia chinensis
Ah.05g180220 Amaranthus hybridus
Ah.05g180230 Amaranthus hybridus
AL6G52100 Arabidopsis lyrata
Aqoxy7G00231 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea
AT4G01290 Arabidopsis thaliana
ATR0661G048 Amborella trichopoda
ATR0661G469 Amborella trichopoda
Atru.chr1.351 Acer truncatum
Atru.chr5.552 Acer truncatum
AUR62004403 Chenopodium quinoa
AUR62022609 Chenopodium quinoa
BcaB01g02151 Brassica carinata
BcaB01g02283 Brassica carinata
BcaB05g23959 Brassica carinata
BcaC01g06854 Brassica carinata
BcaC03g16054 Brassica carinata
BcaC03g16055 Brassica carinata
BcaC04g24140 Brassica carinata
BolC2t09835H Brassica oleracea
BolC3t16170H Brassica oleracea
BolC9t53001H Brassica oleracea
BraA03t12368Z Brassica rapa
BraA09t35736Z Brassica rapa
C02p38200 Brassica napus
C03p38980 Brassica napus
C09p00670 Brassica napus
CANSAT56G4470 Cannabis sativa
CARHR249020 Cardamine hirsuta
Carub.0006s3636 Capsella rubella
Ca_00818_v3 Cicer arietinum L.
Cc02_g38450 Coffea canephora
CDE09G0589 Ceratophyllum demersum
CDE11G0274 Ceratophyllum demersum
Cfa003881 Carpinus fangiana
Cfa016292 Carpinus fangiana
Ciclev10006595m.g Citrus clementina
Ciclev10018621m.g Citrus clementina
CiPaw.01G065700 Carya illinoinensis
CiPaw.02G033900 Carya illinoinensis
ClCG05G001310 Citrullus lanatus
COL.COLO4_12765 Corchorus olitorius
COL.COLO4_30305 Corchorus olitorius
Cpa.g.sc184.26 Carica papaya
CsaV3_3G008680 Cucumis sativus L.
CSS0009973 Camellia sinensis var. sinensis
CSS0038908 Camellia sinensis var. sinensis
DCAR_006945 Daucus carota
DCAR_008631 Daucus carota
Dinv32512 Davidia involucrata
Dinv32513 Davidia involucrata
Dinv35257 Davidia involucrata
Dinv43856 Davidia involucrata
Duzib133G0517 Durio zibethinus
Duzib138G0252 Durio zibethinus
Duzib205G1157 Durio zibethinus
Duzib268G1133 Durio zibethinus
ECA234G2210 Erigeron canadensis
EL10Ac1g00365 Beta vulgaris
Eucgr.E00101 Eucalyptus grandis
FAN01G0094 Fragaria x ananassa
FAN03G1353 Fragaria x ananassa
FAN06G0771 Fragaria x ananassa
FAN06G4234 Fragaria x ananassa
FAN10G1370 Fragaria x ananassa
FAN10G4104 Fragaria x ananassa
FvH4_7g15120 Fragaria vesca
Glyma.09G255400 Glycine max
Glyma.18G237600 Glycine max
Gohir.A11G012500 Gossypium hirsutum
Gohir.A11G091600 Gossypium hirsutum
Gohir.A11G091700 Gossypium hirsutum
Gohir.D11G011700 Gossypium hirsutum
Gohir.D11G096300 Gossypium hirsutum
Gohir.D11G096500 Gossypium hirsutum
Gorai.007G013100 Gossypium raimondii
Gorai.007G102600 Gossypium raimondii
Gorai.007G102800 Gossypium raimondii
GSVIVG01026955001 Vitis vinifera
GSVIVG01028853001 Vitis vinifera
HanXRQChr17g0562341 Helianthus annuus
Haze_00050 Corylus avellana
Haze_15553 Corylus avellana
Hma1.2p1_0623F.1_g191000 Hydrangea macrophylla
Hma1.2p1_0623F.1_g191005 Hydrangea macrophylla
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla
Hma1.2p1_2961F.1_g330880 Hydrangea macrophylla
HPP92_002606 Vanilla planifolia
HPP92_002731 Vanilla planifolia
Hund11716 Selenicereus undatus
Hund16671 Selenicereus undatus
Hund27250 Selenicereus undatus
Lalb_Chr04g0259211 Lupinus albus
Lalb_Chr04g0259221 Lupinus albus
Lalb_Chr04g0259231 Lupinus albus
Lalb_Chr04g0259241 Lupinus albus
Lalb_Chr10g0096711 Lupinus albus
Lalb_Chr17g0339111 Lupinus albus
Lalb_Chr17g0339131 Lupinus albus
Lj1g0014988 Lotus japonicus
Lj7A508G38 Lonicera japonica
Lsat_1_v5_gn_4_35681 Lactuca sativa
Manes.01G253100 Manihot esculenta
Manes.05G030300 Manihot esculenta
Mapoly0012s0024 Marchantia polymorpha
MBI11_g13553_MAGBIO Magnolia biondii
MD01G1069900 Malus domestica
MD07G1132600 Malus domestica
Medtr7g078820 Medicago truncatula
MELO3C006087.2 Cucumis melo
Migut.B01791 Erythranthe guttata
MSTRG.20858 Avicennia marina
MSTRG.4840 Avicennia marina
Nitab4.5_0000200g0170 Nicotiana tabacum
Nitab4.5_0000690g0050 Nicotiana tabacum
Nitab4.5_0000915g0210 Nicotiana tabacum
Nitab4.5_0010703g0040 Nicotiana tabacum
Nn1g01656 Nelumbo nucifera
Oeu015220.3 Olea europaea
Oeu018963.2 Olea europaea
Oeu054339.1 Olea europaea
Os06g0105900 Oryza sativa ssp. japonica
Peaxi162Scf00020g01228 Petunia axillaris
Peaxi162Scf00585g00319 Petunia axillaris
PGR042G1491 Punica granatum
Phvul.008G059100 Phaseolus vulgaris
Potri.002G163000 Populus trichocarpa
Potri.004G073400 Populus trichocarpa
Potri.014G089200 Populus trichocarpa
Prupe.2G176000 Prunus persica
Psat2g103840 Pisum sativum
Psat3g107120 Pisum sativum
Psat7g011640 Pisum sativum
PSO478G2290 Papaver somniferum
PSO782G0890 Papaver somniferum
QL04p055101 Quercus lobata
QL09p012690 Quercus lobata
RcHm_v2.0_Chr1g0357311 Rosa chinensis
Rhsim03G0191400 Rhododendron simsii
Rhsim07G0011300 Rhododendron simsii
Sabra02G0147500 Salix brachista
Sabra04G0048100 Salix brachista
Sabra14G0064800 Salix brachista
SalBow3G3040 Salvia bowleyana
SalBow3G4181 Salvia bowleyana
Sc01g0003270 Simmondsia chinensis
Sc23g0002620 Simmondsia chinensis
Sed0009698 Sechium edule
Sed0010511 Sechium edule
SEGI_14695 Sequoiadendron giganteum
SEGI_21460 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02289 Striga asiatica
Solyc01g095020.3 Solanum lycopersicum
Solyc10g012030.4 Solanum lycopersicum
Sopen01g038800 Solanum pennellii
Sopen10g005780 Solanum pennellii
Sp6g00840 Schrenkiella parvula
TAR374G0905 Trochodendron aralioides
TAR374G1053 Trochodendron aralioides
TAR375G0370 Trochodendron aralioides
THA.LOC104801395 Tarenaya hassleriana
THA.LOC104817035 Tarenaya hassleriana
THA.LOC104825859 Tarenaya hassleriana
Thecc.01G353800 Theobroma cacao
Thecc.01G383400 Theobroma cacao
Thecc.01G383600 Theobroma cacao
Thecc.03G184800 Theobroma cacao
Thhalv10028394m.g Eutrema salsugineum
TPR.G22300 Trifolium pratense
TWI14G0836 Tripterygium wilfordii
TWI23G0144 Tripterygium wilfordii
TWI23G0357 Tripterygium wilfordii
TWI59G0398 Tripterygium wilfordii
unitig_22.g6726 Utricularia gibba
unitig_22.g6727 Utricularia gibba
unitig_8.g3336 Utricularia gibba
vmacro13239 Vaccinium macrocarpon
VMungo1383G2804 Vigna mungo
Zm00001eb374330 Zea mays

User provided reference genes

Program Settings