Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p27800 Brassica napus
A05p09560 Brassica napus
Aa31LG5G21430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2374 Anthoceros agrestis
Actinidia31103 Actinidia chinensis
Actinidia34719 Actinidia chinensis
AL4G32410 Arabidopsis lyrata
AL5G33530 Arabidopsis lyrata
Aqoxy4G02802 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0UXM82 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.66EI83 Arachis hypogaea
AT2G36300 Arabidopsis thaliana
AT3G52760 Arabidopsis thaliana
ATR0605G137 Amborella trichopoda
Atru.chr8.1565 Acer truncatum
AUR62002927 Chenopodium quinoa
AUR62007735 Chenopodium quinoa
AUR62044160 Chenopodium quinoa
BcaB02g09364 Brassica carinata
BcaB06g28927 Brassica carinata
BcaC02g07616 Brassica carinata
BcaC02g11742 Brassica carinata
BNapus_Darmor_BZH_scaffold_239p00020 Brassica napus
BolC4t22831H Brassica oleracea
BolC4t28008H Brassica oleracea
BraA04t18272Z Brassica rapa
BraA05t19909Z Brassica rapa
C04p11820 Brassica napus
C04p65300 Brassica napus
CAN.G1513.4 Capsicum annuum
CANSAT80G1935 Cannabis sativa
CARHR130570 Cardamine hirsuta
CARHR162640 Cardamine hirsuta
Carub.0004s1805 Capsella rubella
Carub.0005s1924 Capsella rubella
Ca_08996_v3 Cicer arietinum L.
CBR_g10857 Chara braunii
CBR_g2958 Chara braunii
Cc02_g09790 Coffea canephora
CDE06G0188 Ceratophyllum demersum
CDE08G0948 Ceratophyllum demersum
CDE11G0953 Ceratophyllum demersum
Cfa016592 Carpinus fangiana
Cfa026672 Carpinus fangiana
Ciclev10012570m.g Citrus clementina
CiPaw.09G012700 Carya illinoinensis
CiPaw.10G008300 Carya illinoinensis
CiPaw.13G038900 Carya illinoinensis
ClCG10G019070 Citrullus lanatus
COL.COLO4_29767 Corchorus olitorius
Cpa.g.sc183.9 Carica papaya
Cpa.g.sc5.37 Carica papaya
Cre09.g402650 Chlamydomonas reinhardtii
CsaV3_3G037170 Cucumis sativus L.
CSS0005550 Camellia sinensis var. sinensis
CSS0022022 Camellia sinensis var. sinensis
CSS0022860 Camellia sinensis var. sinensis
CSS0036632 Camellia sinensis var. sinensis
DCAR_013921 Daucus carota
DCAR_013922 Daucus carota
DCAR_028954 Daucus carota
DCAR_032378 Daucus carota
DCAR_032379 Daucus carota
Dinv09603 Davidia involucrata
Dinv11849 Davidia involucrata
Duzib093G0509 Durio zibethinus
Duzib128G1249 Durio zibethinus
EL10Ac3g06211 Beta vulgaris
EL10Ac3g06213 Beta vulgaris
EL10Ac6g14511 Beta vulgaris
Eucgr.A01507 Eucalyptus grandis
FAN01G1204 Fragaria x ananassa
FAN02G1747 Fragaria x ananassa
FAN04G0747 Fragaria x ananassa
FAN04G1633 Fragaria x ananassa
FAN05G2511 Fragaria x ananassa
FAN05G4077 Fragaria x ananassa
FAN09G3360 Fragaria x ananassa
FAN14G1813 Fragaria x ananassa
FAN14G5030 Fragaria x ananassa
FAN19G1909 Fragaria x ananassa
FAN23G0012 Fragaria x ananassa
FAN26G0628 Fragaria x ananassa
FAN28G1779 Fragaria x ananassa
FvH4_6g27040 Fragaria vesca
Glyma.03G194400 Glycine max
Glyma.19G194200 Glycine max
Gohir.A01G138500 Gossypium hirsutum
Gohir.A01G207100 Gossypium hirsutum
Gohir.D01G128200 Gossypium hirsutum
Gohir.D01G196500 Gossypium hirsutum
Gorai.002G158800 Gossypium raimondii
Gorai.002G240700 Gossypium raimondii
GSVIVG01033828001 Vitis vinifera
HanXRQChr08g0217791 Helianthus annuus
HanXRQChr17g0570591 Helianthus annuus
Haze_19593 Corylus avellana
Hma1.2p1_0802F.1_g220470 Hydrangea macrophylla
HPP92_012048 Vanilla planifolia
Lalb_Chr01g0010411 Lupinus albus
Lalb_Chr01g0018221 Lupinus albus
Lalb_Chr25g0288381 Lupinus albus
Lj1g0001702 Lotus japonicus
Lj3P931T18 Lonicera japonica
Lj4C706T9 Lonicera japonica
Lj7A388T89 Lonicera japonica
Lsat_1_v5_gn_0_7620 Lactuca sativa
Lsat_1_v5_gn_8_23940 Lactuca sativa
Manes.08G024200 Manihot esculenta
Manes.09G056401 Manihot esculenta
Mapoly0150s0018 Marchantia polymorpha
MBI01_g04060_MAGBIO Magnolia biondii
MCO11G705 Micromonas commoda
MD12G1023700 Malus domestica
MD14G1020900 Malus domestica
Medtr7g104430 Medicago truncatula
MELO3C009463.2 Cucumis melo
Migut.F00909 Erythranthe guttata
Migut.F01614 Erythranthe guttata
MSTRG.27534 Avicennia marina
MSTRG.9085 Avicennia marina
Nitab4.5_0001027g0170 Nicotiana tabacum
Nitab4.5_0001437g0160 Nicotiana tabacum
Nitab4.5_0002662g0040 Nicotiana tabacum
Nitab4.5_0012135g0010 Nicotiana tabacum
Oeu025590.1 Olea europaea
Oeu036839.1 Olea europaea
Oeu036840.1 Olea europaea
Os03g0289200 Oryza sativa ssp. japonica
Peaxi162Scf00173g00511 Petunia axillaris
PGR004G0926 Punica granatum
PGSC0003DMG400019486 Solanum tuberosum
PGSC0003DMG400023389 Solanum tuberosum
Phvul.001G189100 Phaseolus vulgaris
Phvul.004G098394 Phaseolus vulgaris
Potri.004G190800 Populus trichocarpa
Potri.009G152600 Populus trichocarpa
Pp3c11_15860 Physcomitrium patens
Pp3c18_15780 Physcomitrium patens
Pp3c18_15783 Physcomitrium patens
Pp3c21_5540 Physcomitrium patens
PRCOL_00002835 Prasinoderma coloniale
Prupe.7G112800 Prunus persica
Psat3g033800 Pisum sativum
Psat5g022640 Pisum sativum
PSO210G3326 Papaver somniferum
PSO339G5446 Papaver somniferum
PSO384G4166 Papaver somniferum
PSO541G0274 Papaver somniferum
PSO675G0532 Papaver somniferum
PSO761G0544 Papaver somniferum
QL07p039292 Quercus lobata
RcHm_v2.0_Chr3g0472991 Rosa chinensis
RcHm_v2.0_Chr3g0491231 Rosa chinensis
Rhsim07G0211000 Rhododendron simsii
Rhsim09G0142700 Rhododendron simsii
Sabra04G0127600 Salix brachista
Sabra09G0120500 Salix brachista
SalBow2G0328 Salvia bowleyana
SalBow6G2765 Salvia bowleyana
Sc02g0000900 Simmondsia chinensis
Sc20g0001180 Simmondsia chinensis
Sed0001726 Sechium edule
Sed0018362 Sechium edule
SEGI_31078 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21343 Striga asiatica
SMO351G0616 Selaginella moellendorffii
Solyc05g055300.1 Solanum lycopersicum
Solyc11g007080.1 Solanum lycopersicum
Sopen05g033740 Solanum pennellii
Sopen11g003000 Solanum pennellii
Sp4g18520 Schrenkiella parvula
Sp5g09570 Schrenkiella parvula
TAR369G0187 Trochodendron aralioides
TAR623G0614 Trochodendron aralioides
TAR633G2199 Trochodendron aralioides
THA.LOC104804679 Tarenaya hassleriana
THA.LOC104823483 Tarenaya hassleriana
Thecc.05G087200 Theobroma cacao
Thhalv10010984m.g Eutrema salsugineum
Thhalv10017131m.g Eutrema salsugineum
TPR.G19550 Trifolium pratense
TWI53G1341 Tripterygium wilfordii
TWI63G0764 Tripterygium wilfordii
TWI74G0563 Tripterygium wilfordii
unitig_748.g8775 Utricularia gibba
vmacro10304 Vaccinium macrocarpon
VMungo1383G3486 Vigna mungo
Zm00001eb013300 Zea mays
Zm00001eb397070 Zea mays

User provided reference genes

Program Settings