Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p16770 Brassica napus
Aa31LG7G14510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2348 Anthoceros agrestis
Ah.04g164730 Amaranthus hybridus
AL4G11730 Arabidopsis lyrata
AL5G24220 Arabidopsis lyrata
Aqoxy5G00902 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0BA9QN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.21PEZK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.28TKL1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8A1TPW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K33YLS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RRG4JE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SX68AT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T2CRY6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UX8VUZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4YZP5 Arachis hypogaea
AT2G22250 Arabidopsis thaliana
ATR0564G471 Amborella trichopoda
Atru.chr1.3714 Acer truncatum
Atru.chr4.227 Acer truncatum
AUR62000485 Chenopodium quinoa
AUR62006827 Chenopodium quinoa
AUR62029939 Chenopodium quinoa
AUR62033748 Chenopodium quinoa
BcaB08g35052 Brassica carinata
BcaC02g08676 Brassica carinata
BcaC02g08723 Brassica carinata
BcaC07g41087 Brassica carinata
BraA04t17309Z Brassica rapa
CAN.G827.3 Capsicum annuum
CAN.G878.8 Capsicum annuum
CANSAT01G1177 Cannabis sativa
CANSAT01G2754 Cannabis sativa
CARHR113480 Cardamine hirsuta
CARHR231470 Cardamine hirsuta
Carub.0004s0139 Capsella rubella
CBR_g36553 Chara braunii
CBR_g81019 Chara braunii
Cc07_g15560 Coffea canephora
CDE03G0458 Ceratophyllum demersum
CDE06G1526 Ceratophyllum demersum
Ciclev10025279m.g Citrus clementina
CiPaw.03G138800 Carya illinoinensis
CiPaw.04G096600 Carya illinoinensis
ClCG07G009440 Citrullus lanatus
COL.COLO4_09912 Corchorus olitorius
Cpa.g.sc20.227 Carica papaya
Cre02.g147302 Chlamydomonas reinhardtii
Cre13.g573900 Chlamydomonas reinhardtii
CsaV3_4G000360 Cucumis sativus L.
CSS0002259 Camellia sinensis var. sinensis
CSS0003079 Camellia sinensis var. sinensis
CSS0014678 Camellia sinensis var. sinensis
DCAR_032171 Daucus carota
Dinv16312 Davidia involucrata
Dinv21938 Davidia involucrata
Duzib147G1273 Durio zibethinus
Duzib187G1314 Durio zibethinus
Duzib264G0977 Durio zibethinus
ECA232G1065 Erigeron canadensis
ECA232G4497 Erigeron canadensis
EL10Ac4g09572 Beta vulgaris
EL10Ac5g11501 Beta vulgaris
Eucgr.I00395 Eucalyptus grandis
Eucgr.I00398 Eucalyptus grandis
Eucgr.I00463 Eucalyptus grandis
FAN19G1223 Fragaria x ananassa
FAN23G1157 Fragaria x ananassa
FAN23G2759 Fragaria x ananassa
FAN26G2714 Fragaria x ananassa
FvH4_1g21500 Fragaria vesca
Glyma.05G181000 Glycine max
Glyma.08G138800 Glycine max
Glyma.11G238200 Glycine max
Glyma.11G238300 Glycine max
Gohir.A11G199633 Gossypium hirsutum
Gohir.A13G028200 Gossypium hirsutum
Gohir.A13G028300 Gossypium hirsutum
Gohir.D11G224500 Gossypium hirsutum
Gohir.D13G027000 Gossypium hirsutum
Gorai.007G241800 Gossypium raimondii
Gorai.013G030300 Gossypium raimondii
GSVIVG01008982001 Vitis vinifera
GSVIVG01015252001 Vitis vinifera
GSVIVG01020940001 Vitis vinifera
GSVIVG01022161001 Vitis vinifera
GSVIVG01022162001 Vitis vinifera
GSVIVG01022163001 Vitis vinifera
HanXRQChr09g0260211 Helianthus annuus
HanXRQChr09g0260231 Helianthus annuus
HanXRQChr15g0484161 Helianthus annuus
Haze_27183 Corylus avellana
Hma1.2p1_0011F.1_g007160 Hydrangea macrophylla
Hma1.2p1_0614F.1_g189540 Hydrangea macrophylla
HPP92_016106 Vanilla planifolia
Hund02342 Selenicereus undatus
Lalb_Chr07g0185001 Lupinus albus
Lalb_Chr13g0296061 Lupinus albus
Lalb_Chr13g0296071 Lupinus albus
Lj4g0017562 Lotus japonicus
Lj6g0022585 Lotus japonicus
Lsat_1_v5_gn_4_141381 Lactuca sativa
Lsat_1_v5_gn_4_141440 Lactuca sativa
Manes.12G138300 Manihot esculenta
Mapoly0058s0104 Marchantia polymorpha
MCO02G005 Micromonas commoda
MCO03G285 Micromonas commoda
MCO16G531 Micromonas commoda
MD01G1024400 Malus domestica
MD15G1329000 Malus domestica
Medtr1807s0010 Medicago truncatula
Medtr7g106830 Medicago truncatula
Medtr8g091280 Medicago truncatula
MELO3C010464.2 Cucumis melo
MELO3C017998.2 Cucumis melo
MELO3C030014.2 Cucumis melo
MELO3C030491.2 Cucumis melo
Migut.H02387 Erythranthe guttata
Migut.L00103 Erythranthe guttata
MSTRG.23329 Avicennia marina
Nitab4.5_0000214g0060 Nicotiana tabacum
Nitab4.5_0004386g0030 Nicotiana tabacum
Nn5g29013 Nelumbo nucifera
Oeu032173.1 Olea europaea
Oeu034199.1 Olea europaea
Oeu040712.1 Olea europaea
Oeu051794.2 Olea europaea
Oeu053564.1 Olea europaea
Os01g0871300 Oryza sativa ssp. japonica
Peaxi162Scf00183g01421 Petunia axillaris
PGR004G1268 Punica granatum
PGSC0003DMG400027919 Solanum tuberosum
Phvul.001G250500 Phaseolus vulgaris
Phvul.001G250600 Phaseolus vulgaris
Phvul.002G262100 Phaseolus vulgaris
Potri.005G079200 Populus trichocarpa
Potri.007G088426 Populus trichocarpa
Pp3c1_16910 Physcomitrium patens
Pp3s32_480 Physcomitrium patens
PRCOL_00004854 Prasinoderma coloniale
PRCOL_00005023 Prasinoderma coloniale
PRCOL_00005041 Prasinoderma coloniale
Prupe.6G179700 Prunus persica
Psat7g053000 Pisum sativum
PSO210G3598 Papaver somniferum
PSO447G0276 Papaver somniferum
QL02p032424 Quercus lobata
QL06p050316 Quercus lobata
QL93p0171_0010 Quercus lobata
RcHm_v2.0_Chr2g0115381 Rosa chinensis
RcHm_v2.0_Chr5g0037501 Rosa chinensis
Rhsim04G0097000 Rhododendron simsii
Rhsim08G0008700 Rhododendron simsii
Rhsim08G0008800 Rhododendron simsii
RhsimUnG0163700 Rhododendron simsii
RhsimUnG0212800 Rhododendron simsii
Sabra07G0072900 Salix brachista
Sabra18G0053200 Salix brachista
Sabra18G0053400 Salix brachista
Sabra18G0053700 Salix brachista
Sabra18G0053800 Salix brachista
SalBow3G2801 Salvia bowleyana
Sc04g0003290 Simmondsia chinensis
Sed0022642 Sechium edule
Sed0024954 Sechium edule
SEGI_19936 Sequoiadendron giganteum
SEGI_31864 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13608 Striga asiatica
SGA_v2.0_scaffold47G17751 Striga asiatica
SHI11587 Sapria himalayana
SMO351G0219 Selaginella moellendorffii
Solyc04g054710.3 Solanum lycopersicum
Sopen04g024460 Solanum pennellii
Sp4g01300 Schrenkiella parvula
TAR376G0746 Trochodendron aralioides
TAR628G1078 Trochodendron aralioides
THA.LOC104824869 Tarenaya hassleriana
Thecc.01G106100 Theobroma cacao
Thhalv10000093m.g Eutrema salsugineum
TPR.G2157 Trifolium pratense
TWI53G0811 Tripterygium wilfordii
TWI77G0071 Tripterygium wilfordii
vmacro09115 Vaccinium macrocarpon
vmacro18616 Vaccinium macrocarpon
VMungo0251G1785 Vigna mungo
VMungo1383G1191 Vigna mungo
VMungo1383G3703 Vigna mungo
Zm00001eb146400 Zea mays
Zm00001eb348660 Zea mays

User provided reference genes

Program Settings