Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p26990 Brassica napus
A05p10140 Brassica napus
A05p25320 Brassica napus
A09p34230 Brassica napus
Aa31LG2G14110 Aethionema arabicum
Aa31LG9G15610 Aethionema arabicum
Actinidia01335 Actinidia chinensis
Actinidia29278 Actinidia chinensis
Ah.07g201360 Amaranthus hybridus
Ah.12g055980 Amaranthus hybridus
AL1G46040 Arabidopsis lyrata
AL4G31620 Arabidopsis lyrata
Aqoxy3G02143 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JMHQ16 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z69TJ6 Arachis hypogaea
AT1G31940 Arabidopsis thaliana
AT2G35585 Arabidopsis thaliana
ATR0598G345 Amborella trichopoda
ATR0829G136 Amborella trichopoda
Atru.chr6.1552 Acer truncatum
AUR62007409 Chenopodium quinoa
AUR62027323 Chenopodium quinoa
AUR62033208 Chenopodium quinoa
AUR62044225 Chenopodium quinoa
BcaB02g09414 Brassica carinata
BcaB03g13776 Brassica carinata
BcaB07g32857 Brassica carinata
BcaC02g11672 Brassica carinata
BcaC02g11674 Brassica carinata
BcaC05g27220 Brassica carinata
BcaC05g27937 Brassica carinata
BcaNung07274 Brassica carinata
BolC4t22900H Brassica oleracea
BolC4t27924H Brassica oleracea
BolC5t31853H Brassica oleracea
BolC5t32678H Brassica oleracea
BraA04t18200Z Brassica rapa
BraA05t19955Z Brassica rapa
BraA05t21417Z Brassica rapa
BraA09t38971Z Brassica rapa
C04p12530 Brassica napus
C04p12550 Brassica napus
C04p64400 Brassica napus
C05p31290 Brassica napus
C05p39410 Brassica napus
CAN.G474.26 Capsicum annuum
CANSAT21G0457 Cannabis sativa
CANSAT56G3990 Cannabis sativa
CARHR031290 Cardamine hirsuta
CARHR129770 Cardamine hirsuta
Carub.0001s3027 Capsella rubella
Carub.0004s1726 Capsella rubella
Ca_25158_v3 Cicer arietinum L.
Cc08_g03850 Coffea canephora
CDE03G0025 Ceratophyllum demersum
CDE06G0200 Ceratophyllum demersum
Cfa012536 Carpinus fangiana
Ciclev10002760m.g Citrus clementina
CiPaw.12G069800 Carya illinoinensis
ClCG10G001200 Citrullus lanatus
COL.COLO4_16913 Corchorus olitorius
CsaV3_3G001240 Cucumis sativus L.
CSS0006858 Camellia sinensis var. sinensis
CSS0011703 Camellia sinensis var. sinensis
CSS0028298 Camellia sinensis var. sinensis
DCAR_004264 Daucus carota
DCAR_008204 Daucus carota
Dinv06911 Davidia involucrata
Dinv29021 Davidia involucrata
Duzib068G0284 Durio zibethinus
Duzib205G1823 Durio zibethinus
ECA233G2030 Erigeron canadensis
EL10Ac5g11930 Beta vulgaris
Eucgr.D02636 Eucalyptus grandis
FAN04G2484 Fragaria x ananassa
FAN08G0102 Fragaria x ananassa
FAN13G0864 Fragaria x ananassa
FAN18G1056 Fragaria x ananassa
FAN18G2371 Fragaria x ananassa
FvH4_5g23370 Fragaria vesca
Glyma.01G010900 Glycine max
Glyma.09G210200 Glycine max
Gohir.A03G000024 Gossypium hirsutum
Gohir.A11G028400 Gossypium hirsutum
Gohir.D03G177000 Gossypium hirsutum
Gohir.D11G030800 Gossypium hirsutum
Gorai.007G033700 Gossypium raimondii
GSVIVG01013000001 Vitis vinifera
HanXRQChr03g0082031 Helianthus annuus
HanXRQChr13g0404821 Helianthus annuus
Hma1.2p1_0803F.1_g220845 Hydrangea macrophylla
Hma1.2p1_0803F.1_g220850 Hydrangea macrophylla
Hma1.2p1_1819F.1_g304070 Hydrangea macrophylla
HPP92_005435 Vanilla planifolia
HPP92_005441 Vanilla planifolia
HPP92_009019 Vanilla planifolia
HPP92_014701 Vanilla planifolia
Hund11105 Selenicereus undatus
Hund14334 Selenicereus undatus
Lalb_Chr05g0215661 Lupinus albus
Lalb_Chr16g0380941 Lupinus albus
Lj2g0008166 Lotus japonicus
Lj7C124G0 Lonicera japonica
Lj8A318T46 Lonicera japonica
Lsat_1_v5_gn_6_17681 Lactuca sativa
Lsat_1_v5_gn_6_73320 Lactuca sativa
Manes.15G192766 Manihot esculenta
Manes.17G016002 Manihot esculenta
Mapoly0003s0148 Marchantia polymorpha
MBI04_g20981_MAGBIO Magnolia biondii
MBI05_g12773_MAGBIO Magnolia biondii
MBI13_g04781_MAGBIO Magnolia biondii
MBI19_g01917_MAGBIO Magnolia biondii
MD06G1024900 Malus domestica
Medtr5g027940 Medicago truncatula
MELO3C013813.2 Cucumis melo
Migut.A00590 Erythranthe guttata
Migut.E01327 Erythranthe guttata
MSTRG.1790 Avicennia marina
MSTRG.25700 Avicennia marina
Nitab4.5_0000301g0080 Nicotiana tabacum
Nitab4.5_0001632g0070 Nicotiana tabacum
Nitab4.5_0002429g0050 Nicotiana tabacum
Nitab4.5_0005370g0020 Nicotiana tabacum
Nn1g01903 Nelumbo nucifera
Nn3g19353 Nelumbo nucifera
Oeu017100.1 Olea europaea
Oeu027879.1 Olea europaea
Os02g0697700 Oryza sativa ssp. japonica
Peaxi162Scf00009g00286 Petunia axillaris
Peaxi162Scf00045g00444 Petunia axillaris
Peaxi162Scf00052g00329 Petunia axillaris
Peaxi162Scf00185g01122 Petunia axillaris
PGR031G2143 Punica granatum
PGSC0003DMG400009296 Solanum tuberosum
PGSC0003DMG400016765 Solanum tuberosum
Phvul.002G133800 Phaseolus vulgaris
Potri.001G135000 Populus trichocarpa
Pp3c10_15200 Physcomitrium patens
Pp3c16_20090 Physcomitrium patens
Pp3c18_16120 Physcomitrium patens
Pp3c19_18080 Physcomitrium patens
Pp3c21_4200 Physcomitrium patens
Pp3c22_13200 Physcomitrium patens
Pp3c27_6140 Physcomitrium patens
Pp3c8_8000 Physcomitrium patens
Prupe.5G026000 Prunus persica
Psat2g140080 Pisum sativum
PSO063G1743 Papaver somniferum
PSO782G4801 Papaver somniferum
QL07p005886 Quercus lobata
QL12p000179 Quercus lobata
RcHm_v2.0_Chr7g0212381 Rosa chinensis
Rhsim07G0134300 Rhododendron simsii
Rhsim11G0028200 Rhododendron simsii
Sabra01G0104400 Salix brachista
SalBow1G3570 Salvia bowleyana
SalBow1G4269 Salvia bowleyana
SalBow8G3962 Salvia bowleyana
Sc07g0008400 Simmondsia chinensis
Sed0026512 Sechium edule
SEGI_08166 Sequoiadendron giganteum
SEGI_33169 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31383 Striga asiatica
SGA_v2.0_scaffold96G29046 Striga asiatica
SMO147G0326 Selaginella moellendorffii
Solyc06g066290.3 Solanum lycopersicum
Solyc08g076180.3 Solanum lycopersicum
Sopen06g021730 Solanum pennellii
Sopen08g024820 Solanum pennellii
Sp1g27670 Schrenkiella parvula
Sp4g17800 Schrenkiella parvula
TAR374G1419 Trochodendron aralioides
TAR375G0833 Trochodendron aralioides
TAR636G1298 Trochodendron aralioides
THA.LOC104798506 Tarenaya hassleriana
THA.LOC104814407 Tarenaya hassleriana
Thecc.03G312100 Theobroma cacao
Thhalv10008962m.g Eutrema salsugineum
Thhalv10017363m.g Eutrema salsugineum
TPR.G19474 Trifolium pratense
TWI15G1018 Tripterygium wilfordii
TWI81G0448 Tripterygium wilfordii
unitig_32.g11618 Utricularia gibba
unitig_32.g11622 Utricularia gibba
vmacro00238 Vaccinium macrocarpon
vmacro14211 Vaccinium macrocarpon
VMungo1215G0432 Vigna mungo
VMungo1383G2097 Vigna mungo
Zm00001eb251500 Zea mays

User provided reference genes

Program Settings