Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p08760 Brassica napus
A02p15530 Brassica napus
A05p01280 Brassica napus
Aa31LG1G27870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4084 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.663 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.664__665 Anthoceros agrestis
Actinidia17298 Actinidia chinensis
Actinidia39220 Actinidia chinensis
Ah.03g136880 Amaranthus hybridus
Ah.14g081150 Amaranthus hybridus
AL350U10020 Arabidopsis lyrata
AL3G34240 Arabidopsis lyrata
AL4G45940 Arabidopsis lyrata
Aqoxy4G00207 Aquilegia oxysepala
Aqoxy7G00067 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.100NT6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M38EY0 Arachis hypogaea
AT2G46520 Arabidopsis thaliana
ATR0605G321 Amborella trichopoda
AUR62011778 Chenopodium quinoa
AUR62020311 Chenopodium quinoa
BcaB03g13365 Brassica carinata
BcaB05g21496 Brassica carinata
BcaC02g12682 Brassica carinata
BcaC03g13954 Brassica carinata
BcaC03g15021 Brassica carinata
BolC2t07236H Brassica oleracea
BolC2t07237H Brassica oleracea
BolC2t08632H Brassica oleracea
BolC2t08633H Brassica oleracea
BolC4t21795H Brassica oleracea
BraA02t05946Z Brassica rapa
BraA02t06614Z Brassica rapa
BraA05t19126Z Brassica rapa
C02p25670 Brassica napus
C04p01410 Brassica napus
CAN.G1045.28 Capsicum annuum
CAN.G1415.23 Capsicum annuum
CANSAT56G2221 Cannabis sativa
CARHR124510 Cardamine hirsuta
CARHR141850 Cardamine hirsuta
CARHR193560 Cardamine hirsuta
CARHR195690 Cardamine hirsuta
Carub.0001s3638 Capsella rubella
Carub.0004s2923 Capsella rubella
Ca_23524_v3 Cicer arietinum L.
CBR_g50023 Chara braunii
Cc02_g39500 Coffea canephora
CDE10G0625 Ceratophyllum demersum
CDE10G0721 Ceratophyllum demersum
Cfa003788 Carpinus fangiana
Cfa023442 Carpinus fangiana
Ciclev10018709m.g Citrus clementina
CiPaw.01G077200 Carya illinoinensis
ClCG05G000750 Citrullus lanatus
COL.COLO4_06273 Corchorus olitorius
Cpa.g.sc18.79 Carica papaya
Cre16.g685901 Chlamydomonas reinhardtii
CsaV3_3G007970 Cucumis sativus L.
CSS0032390 Camellia sinensis var. sinensis
CSS0048042 Camellia sinensis var. sinensis
DCAR_008665 Daucus carota
Dinv07459 Davidia involucrata
Dinv32601 Davidia involucrata
Dinv34217 Davidia involucrata
Duzib133G0673 Durio zibethinus
Duzib138G1559 Durio zibethinus
ECA236G0047 Erigeron canadensis
ECA240G0654 Erigeron canadensis
ECA247G2319 Erigeron canadensis
EL10Ac6g13271 Beta vulgaris
EL10Ac8g18571 Beta vulgaris
EL10Ac8g18572 Beta vulgaris
Eucgr.D02383 Eucalyptus grandis
FAN01G1925 Fragaria x ananassa
FAN03G2718 Fragaria x ananassa
FAN06G1715 Fragaria x ananassa
FAN06G4341 Fragaria x ananassa
FAN10G2704 Fragaria x ananassa
FAN10G3025 Fragaria x ananassa
FAN12G2779 Fragaria x ananassa
FAN12G3619 Fragaria x ananassa
FAN17G1261 Fragaria x ananassa
FAN17G1901 Fragaria x ananassa
FAN22G1715 Fragaria x ananassa
FvH4_7g16830 Fragaria vesca
Glyma.07G054900 Glycine max
Glyma.16G023700 Glycine max
Gohir.A07G137000 Gossypium hirsutum
Gohir.D07G142200 Gossypium hirsutum
Gorai.001G154000 Gossypium raimondii
GSVIVG01027164001 Vitis vinifera
HanXRQChr04g0120491 Helianthus annuus
Haze_15672 Corylus avellana
Hma1.2p1_0390F.1_g142640 Hydrangea macrophylla
HPP92_002938 Vanilla planifolia
Hund27357 Selenicereus undatus
Lalb_Chr04g0254381 Lupinus albus
Lalb_Chr17g0342751 Lupinus albus
Lj3g0012795 Lotus japonicus
Lj5A75T44 Lonicera japonica
Lj6g0009697 Lotus japonicus
Lj7P499T29 Lonicera japonica
Lj9A388T38 Lonicera japonica
Lj9C388G20 Lonicera japonica
Lj9C388T18 Lonicera japonica
Lsat_1_v5_gn_2_108301 Lactuca sativa
Lsat_1_v5_gn_2_118340 Lactuca sativa
Lsat_1_v5_gn_2_118360 Lactuca sativa
Lsat_1_v5_gn_2_44960 Lactuca sativa
Lsat_1_v5_gn_2_68180 Lactuca sativa
Lsat_1_v5_gn_7_961 Lactuca sativa
Manes.01G245400 Manihot esculenta
Manes.05G021800 Manihot esculenta
Mapoly0156s0024 Marchantia polymorpha
MCO04G210 Micromonas commoda
MD01G1083100 Malus domestica
MD07G1151800 Malus domestica
Medtr6g051660 Medicago truncatula
Medtr8g027450 Medicago truncatula
MELO3C006015.2 Cucumis melo
Migut.B01885 Erythranthe guttata
Migut.N01537 Erythranthe guttata
MSTRG.17352 Avicennia marina
Nitab4.5_0001763g0060 Nicotiana tabacum
Nitab4.5_0002614g0030 Nicotiana tabacum
Nn1g00272 Nelumbo nucifera
Oeu004956.1 Olea europaea
Oeu007881.3 Olea europaea
Oeu043228.1 Olea europaea
Os01g0235400 Oryza sativa ssp. japonica
Peaxi162Scf00345g00023 Petunia axillaris
PGR042G2389 Punica granatum
PGSC0003DMG401000117 Solanum tuberosum
Phvul.006G114111 Phaseolus vulgaris
Phvul.006G114200 Phaseolus vulgaris
Potri.002G172700 Populus trichocarpa
Potri.014G100000 Populus trichocarpa
Pp3c16_3270 Physcomitrium patens
Pp3c27_3380 Physcomitrium patens
PRCOL_00001712 Prasinoderma coloniale
Prupe.2G190300 Prunus persica
Prupe.2G190900 Prunus persica
Psat1g149000 Pisum sativum
Psat4g156360 Pisum sativum
Psat4g162200 Pisum sativum
PSO135G0828 Papaver somniferum
PSO384G3294 Papaver somniferum
QL04p077689 Quercus lobata
QL05p088277 Quercus lobata
QL08p045638 Quercus lobata
QL10p039122 Quercus lobata
QL11p045606 Quercus lobata
RcHm_v2.0_Chr1g0360031 Rosa chinensis
Rhsim03G0025100 Rhododendron simsii
Sabra02G0140500 Salix brachista
Sabra14G0073400 Salix brachista
SalBow2G0371 Salvia bowleyana
SalBow3G0266 Salvia bowleyana
Sc02g0002440 Simmondsia chinensis
Sc02g0002490 Simmondsia chinensis
Sed0018077 Sechium edule
Sed0022447 Sechium edule
SEGI_02600 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09976 Striga asiatica
SGA_v2.0_scaffold22G09979 Striga asiatica
SHI11330 Sapria himalayana
SMO358G0230 Selaginella moellendorffii
SMO364G0669 Selaginella moellendorffii
Solyc01g096060.4 Solanum lycopersicum
Sopen01g039780 Solanum pennellii
Sp4g28560 Schrenkiella parvula
TAR371G1016 Trochodendron aralioides
TAR375G0067 Trochodendron aralioides
TAR375G0657 Trochodendron aralioides
THA.LOC104817368 Tarenaya hassleriana
Thecc.01G340800 Theobroma cacao
Thhalv10001293m.g Eutrema salsugineum
Thhalv10019782m.g Eutrema salsugineum
TPR.G20226 Trifolium pratense
TPR.G33518 Trifolium pratense
TWI59G0599 Tripterygium wilfordii
unitig_736.g22809 Utricularia gibba
unitig_899.g14794 Utricularia gibba
vmacro07844 Vaccinium macrocarpon
VMungo0540G0209 Vigna mungo
VMungo0540G0473 Vigna mungo
Zm00001eb055080 Zea mays
Zm00001eb216140 Zea mays

User provided reference genes

Program Settings