Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p40750 Brassica napus
A09p07430 Brassica napus
A10p29120 Brassica napus
Aa31LG11G1730 Aethionema arabicum
Aa31LG3G19000 Aethionema arabicum
Actinidia25502 Actinidia chinensis
Ah.08g213960 Amaranthus hybridus
Ah.10g025710 Amaranthus hybridus
Ah.10g025740 Amaranthus hybridus
AL6G17670 Arabidopsis lyrata
AL8G38520 Arabidopsis lyrata
Aqoxy3G03509 Aquilegia oxysepala
Aqoxy5G03196 Aquilegia oxysepala
Aqoxy7G01841 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3H24VY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LCBQ0N Arachis hypogaea
AT5G07370 Arabidopsis thaliana
AT5G61760 Arabidopsis thaliana
ATR0582G054 Amborella trichopoda
Atru.chr4.1248 Acer truncatum
Atru.chr6.1951 Acer truncatum
AUR62008871 Chenopodium quinoa
AUR62031839 Chenopodium quinoa
AUR62032430 Chenopodium quinoa
BcaB01g02173 Brassica carinata
BcaC04g23437 Brassica carinata
BcaC06g30949 Brassica carinata
BcaC06g32444 Brassica carinata
BcaC06g33129 Brassica carinata
BcaC06g33247 Brassica carinata
BcaC06g33768 Brassica carinata
BcaNung01421 Brassica carinata
BolC7t44226H Brassica oleracea
BolC9t53744H Brassica oleracea
BolC9t59695H Brassica oleracea
BraA06t26996Z Brassica rapa
BraA09t36397Z Brassica rapa
BraA10t44961Z Brassica rapa
C07p37150 Brassica napus
C09p08340 Brassica napus
C09p69510 Brassica napus
CAN.G1008.39 Capsicum annuum
CAN.G47.2 Capsicum annuum
CANSAT21G0784 Cannabis sativa
CANSAT21G1258 Cannabis sativa
CANSAT35G0374 Cannabis sativa
CARHR205780 Cardamine hirsuta
CARHR275520 Cardamine hirsuta
Carub.0006s0634 Capsella rubella
Carub.0008s2245 Capsella rubella
Ca_23729_v3 Cicer arietinum L.
CBR_g16917 Chara braunii
CBR_g44488 Chara braunii
Cc04_g05610 Coffea canephora
CDE12G0602 Ceratophyllum demersum
Cfa023483 Carpinus fangiana
Ciclev10032104m.g Citrus clementina
CiPaw.11G031800 Carya illinoinensis
CiPaw.11G031900 Carya illinoinensis
COL.COLO4_37284 Corchorus olitorius
Cpa.g.sc13.199 Carica papaya
Cre12.g555450 Chlamydomonas reinhardtii
CsaV3_4G002480 Cucumis sativus L.
CSS0004922 Camellia sinensis var. sinensis
CSS0012447 Camellia sinensis var. sinensis
CSS0034139 Camellia sinensis var. sinensis
CSS0043550 Camellia sinensis var. sinensis
CSS0048148 Camellia sinensis var. sinensis
DCAR_016326 Daucus carota
DCAR_021389 Daucus carota
Dinv01389 Davidia involucrata
Dinv13696 Davidia involucrata
Duzib205G1190 Durio zibethinus
ECA232G3549 Erigeron canadensis
ECA247G3300 Erigeron canadensis
EL10Ac2g02483 Beta vulgaris
EL10Ac2g02484 Beta vulgaris
EL10Ac7g17784 Beta vulgaris
Eucgr.K03506 Eucalyptus grandis
Eucgr.K03510 Eucalyptus grandis
FvH4_5g09980 Fragaria vesca
Glyma.12G240900 Glycine max
Gohir.A03G055300 Gossypium hirsutum
Gohir.A11G007300 Gossypium hirsutum
Gohir.A12G194900 Gossypium hirsutum
Gohir.D03G111300 Gossypium hirsutum
Gohir.D11G006400 Gossypium hirsutum
Gohir.D12G197300 Gossypium hirsutum
Gorai.003G117800 Gossypium raimondii
Gorai.007G007700 Gossypium raimondii
Gorai.008G211900 Gossypium raimondii
GSVIVG01008339001 Vitis vinifera
HanXRQChr08g0229041 Helianthus annuus
HanXRQChr09g0274361 Helianthus annuus
HanXRQChr16g0499331 Helianthus annuus
Haze_07074 Corylus avellana
Haze_16345 Corylus avellana
Hma1.2p1_0338F.1_g129510 Hydrangea macrophylla
Hma1.2p1_0577F.1_g182100 Hydrangea macrophylla
HPP92_023047 Vanilla planifolia
HPP92_023098 Vanilla planifolia
Hund02975 Selenicereus undatus
Lalb_Chr03g0033871 Lupinus albus
Lalb_Chr19g0131951 Lupinus albus
Lj2g0002901 Lotus japonicus
Lj3g0018600 Lotus japonicus
Lj5C86T10 Lonicera japonica
Lj9P489T20 Lonicera japonica
Lsat_1_v5_gn_1_29881 Lactuca sativa
Lsat_1_v5_gn_4_85361 Lactuca sativa
Manes.06G128400 Manihot esculenta
Manes.14G042900 Manihot esculenta
Mapoly0118s0021 Marchantia polymorpha
MBI07_g42018_MAGBIO Magnolia biondii
MD00G1076800 Malus domestica
MD06G1128700 Malus domestica
Medtr8g032240 Medicago truncatula
Medtr8g039530 Medicago truncatula
MELO3C017795.2 Cucumis melo
MSTRG.22821 Avicennia marina
Nitab4.5_0000976g0240 Nicotiana tabacum
Nitab4.5_0002540g0080 Nicotiana tabacum
Nitab4.5_0004781g0070 Nicotiana tabacum
Nitab4.5_0011883g0010 Nicotiana tabacum
Nn3g20929 Nelumbo nucifera
Nn3g21004 Nelumbo nucifera
Nn6g34426 Nelumbo nucifera
Oeu012859.1 Olea europaea
Oeu051175.1 Olea europaea
Os02g0523800 Oryza sativa ssp. japonica
Peaxi162Scf00314g00710 Petunia axillaris
Peaxi162Scf00674g00037 Petunia axillaris
PGR102G1650 Punica granatum
PGR142G4275 Punica granatum
PGSC0003DMG400014228 Solanum tuberosum
PGSC0003DMG400014467 Solanum tuberosum
Phvul.011G214900 Phaseolus vulgaris
Potri.012G111400 Populus trichocarpa
Potri.015G109500 Populus trichocarpa
Pp3c9_13950 Physcomitrium patens
Prupe.5G138600 Prunus persica
PSO017G1632 Papaver somniferum
PSO339G3286 Papaver somniferum
PSO339G5399 Papaver somniferum
PSO384G4838 Papaver somniferum
PSO801G0512 Papaver somniferum
QL10p000163 Quercus lobata
QL10p065288 Quercus lobata
RcHm_v2.0_Chr7g0188281 Rosa chinensis
Rhsim08G0200000 Rhododendron simsii
Rhsim12G0182400 Rhododendron simsii
Sabra12G0081100 Salix brachista
Sabra15G0131700 Salix brachista
SalBow7G4712 Salvia bowleyana
Sc17g0004250 Simmondsia chinensis
Sed0002003 Sechium edule
Sed0023857 Sechium edule
SGA_v2.0_scaffold135G34970 Striga asiatica
SGA_v2.0_scaffold2947G54248 Striga asiatica
SHI30465 Sapria himalayana
SMO358G0197 Selaginella moellendorffii
Solyc03g118000.1 Solanum lycopersicum
Solyc12g042430.2 Solanum lycopersicum
Sopen03g036900 Solanum pennellii
Sopen12g021420 Solanum pennellii
Sp2g24960 Schrenkiella parvula
Sp6g35500 Schrenkiella parvula
TAR623G0132 Trochodendron aralioides
TAR633G0744 Trochodendron aralioides
TAR633G1970 Trochodendron aralioides
THA.LOC104818295 Tarenaya hassleriana
Thecc.03G143200 Theobroma cacao
Thhalv10004707m.g Eutrema salsugineum
Thhalv10013933m.g Eutrema salsugineum
TPR.G9790 Trifolium pratense
TWI14G0645 Tripterygium wilfordii
TWI23G0234 Tripterygium wilfordii
unitig_22.g6272 Utricularia gibba
vmacro19099 Vaccinium macrocarpon
VMungo1127G0004 Vigna mungo
Zm00001eb049690 Zea mays
Zm00001eb076370 Zea mays
Zm00001eb221960 Zea mays
Zm00001eb242280 Zea mays
Zm00001eb277740 Zea mays
Zm00001eb277760 Zea mays
Zm00001eb283920 Zea mays
Zm00001eb287040 Zea mays
Zm00001eb337080 Zea mays
Zm00001eb396850 Zea mays

User provided reference genes

Program Settings