Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p08820 Brassica napus
A10p21130 Brassica napus
Aa31LG11G11250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.147 Anthoceros agrestis
Actinidia11173 Actinidia chinensis
Actinidia24398 Actinidia chinensis
Actinidia24399 Actinidia chinensis
Ah.01g001620 Amaranthus hybridus
Ah.01g012930 Amaranthus hybridus
Ah.07g198410 Amaranthus hybridus
AL6G29630 Arabidopsis lyrata
Aqoxy2G02255 Aquilegia oxysepala
Aqoxy3G01046 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.01A9SY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4R7AD Arachis hypogaea
AT5G18400 Arabidopsis thaliana
ATR0618G278 Amborella trichopoda
Atru.chr9.2066 Acer truncatum
AUR62000767 Chenopodium quinoa
AUR62005202 Chenopodium quinoa
AUR62015205 Chenopodium quinoa
AUR62017668 Chenopodium quinoa
BcaB03g16824 Brassica carinata
BcaB05g23321 Brassica carinata
BcaB08g36681 Brassica carinata
BcaC03g13595 Brassica carinata
BcaC04g18694 Brassica carinata
BcaNung04934 Brassica carinata
BolC3t13511H Brassica oleracea
BolC9t58693H Brassica oleracea
BraA03t10207Z Brassica rapa
C03p10310 Brassica napus
C09p58280 Brassica napus
CAN.G1425.3 Capsicum annuum
CANSAT64G1690 Cannabis sativa
CARHR194630 Cardamine hirsuta
Carub.0006s1666 Capsella rubella
Carub.0008s0217 Capsella rubella
Ca_03027_v3 Cicer arietinum L.
Ca_03029_v3 Cicer arietinum L.
Ca_06100_v3 Cicer arietinum L.
Ca_14027_v3 Cicer arietinum L.
CBR_g263 Chara braunii
Cc00_g17080 Coffea canephora
Cc00_g23020 Coffea canephora
Cc00_g26130 Coffea canephora
Cc08_g04800 Coffea canephora
Cc08_g04900 Coffea canephora
Cc08_g04950 Coffea canephora
Cc08_g05000 Coffea canephora
CDE02G3181 Ceratophyllum demersum
CDE04G2679 Ceratophyllum demersum
CDE05G0161 Ceratophyllum demersum
CDE05G1904 Ceratophyllum demersum
CDE05G2128 Ceratophyllum demersum
Cfa013868 Carpinus fangiana
Cfa022453 Carpinus fangiana
Ciclev10032368m.g Citrus clementina
CiPaw.07G157700 Carya illinoinensis
CiPaw.08G060100 Carya illinoinensis
ClCG10G011850 Citrullus lanatus
COL.COLO4_09060 Corchorus olitorius
COL.COLO4_11873 Corchorus olitorius
Cpa.g.sc51.45 Carica papaya
Cre11.g475350 Chlamydomonas reinhardtii
CsaV3_3G031510 Cucumis sativus L.
CsaV3_3G032510 Cucumis sativus L.
CSS0032311 Camellia sinensis var. sinensis
CSS0033047 Camellia sinensis var. sinensis
CSS0049191 Camellia sinensis var. sinensis
DCAR_002566 Daucus carota
DCAR_030401 Daucus carota
Dinv05241 Davidia involucrata
Dinv32105 Davidia involucrata
Duzib133G1064 Durio zibethinus
Duzib138G0618 Durio zibethinus
ECA240G3477 Erigeron canadensis
EL10Ac9g22923 Beta vulgaris
Eucgr.J00852 Eucalyptus grandis
FvH4_4g36731 Fragaria vesca
Glyma.11G103000 Glycine max
Glyma.12G141400 Glycine max
Glyma.U018351 Glycine max
Gohir.A08G186600 Gossypium hirsutum
Gohir.A11G124700 Gossypium hirsutum
Gohir.D08G204800 Gossypium hirsutum
Gohir.D11G129900 Gossypium hirsutum
Gorai.004G216900 Gossypium raimondii
Gorai.007G139000 Gossypium raimondii
GSVIVG01010181001 Vitis vinifera
HanXRQChr03g0086691 Helianthus annuus
HanXRQChr17g0533671 Helianthus annuus
Haze_22545 Corylus avellana
Hma1.2p1_0218F.1_g092550 Hydrangea macrophylla
HPP92_009730 Vanilla planifolia
Hund03395 Selenicereus undatus
Hund19509 Selenicereus undatus
Hund19574 Selenicereus undatus
Hund19575 Selenicereus undatus
Hund31482 Selenicereus undatus
Lalb_Chr03g0024851 Lupinus albus
Lj1g0005490 Lotus japonicus
Lj3g0003654 Lotus japonicus
Lj6A721G58 Lonicera japonica
Lsat_1_v5_gn_3_62741 Lactuca sativa
Lsat_1_v5_gn_3_7261 Lactuca sativa
Lsat_1_v5_gn_6_87300 Lactuca sativa
Lsat_1_v5_gn_6_87320 Lactuca sativa
Manes.01G073300 Manihot esculenta
Mapoly0032s0120 Marchantia polymorpha
MBI03_g24013_MAGBIO Magnolia biondii
MBI06_g34034_MAGBIO Magnolia biondii
MBI06_g36503_MAGBIO Magnolia biondii
MCO04G029 Micromonas commoda
MD12G1122700 Malus domestica
MD13G1007600 Malus domestica
MD16G1000500 Malus domestica
Medtr4g074480 Medicago truncatula
Medtr4g108000 Medicago truncatula
MELO3C024034.2 Cucumis melo
Migut.E01352 Erythranthe guttata
MSTRG.1768 Avicennia marina
Nitab4.5_0001450g0070 Nicotiana tabacum
Nitab4.5_0001659g0130 Nicotiana tabacum
Nitab4.5_0002941g0020 Nicotiana tabacum
Nn4g24926 Nelumbo nucifera
Nn6g34923 Nelumbo nucifera
Oeu042207.1 Olea europaea
Oeu045722.3 Olea europaea
Os04g0674400 Oryza sativa ssp. japonica
Os04g0682050 Oryza sativa ssp. japonica
Peaxi162Scf00193g00013 Petunia axillaris
PGR042G0762 Punica granatum
PGSC0003DMG400005723 Solanum tuberosum
PGSC0003DMG400030870 Solanum tuberosum
Phvul.L003737 Phaseolus vulgaris
Potri.002G062200 Populus trichocarpa
Potri.005G198900 Populus trichocarpa
Pp3c13_7070 Physcomitrium patens
Pp3c8_19850 Physcomitrium patens
PRCOL_00002502 Prasinoderma coloniale
Prupe.1G345400 Prunus persica
Prupe.8G036300 Prunus persica
Psat7g173800 Pisum sativum
PSO063G0008 Papaver somniferum
PSO782G0946 Papaver somniferum
QL02p009504 Quercus lobata
QL09p042102 Quercus lobata
QL09p042139 Quercus lobata
RcHm_v2.0_Chr3g0449691 Rosa chinensis
RcHm_v2.0_Chr4g0446451 Rosa chinensis
Rhsim04G0081000 Rhododendron simsii
Rhsim06G0126100 Rhododendron simsii
Sabra02G0050100 Salix brachista
Sabra05G0151500 Salix brachista
SalBow8G4212 Salvia bowleyana
Sc06g0004000 Simmondsia chinensis
Sc10g0007060 Simmondsia chinensis
Sc20g0002190 Simmondsia chinensis
Sed0014776 Sechium edule
Sed0024830 Sechium edule
SEGI_19284 Sequoiadendron giganteum
SEGI_23700 Sequoiadendron giganteum
SEGI_32675 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35883 Striga asiatica
SGA_v2.0_scaffold277G46719 Striga asiatica
SGA_v2.0_scaffold49G18286 Striga asiatica
SMO367G0289 Selaginella moellendorffii
Solyc03g119420.3 Solanum lycopersicum
Solyc08g075730.3 Solanum lycopersicum
Sopen03g038270 Solanum pennellii
Sopen08g024380 Solanum pennellii
Sp6g25920 Schrenkiella parvula
TAR371G1198 Trochodendron aralioides
TAR629G0796 Trochodendron aralioides
THA.LOC104802853 Tarenaya hassleriana
THA.LOC104820751 Tarenaya hassleriana
Thecc.01G274200 Theobroma cacao
Thhalv10015717m.g Eutrema salsugineum
TPR.G20575 Trifolium pratense
TPR.G22013 Trifolium pratense
TPR.G32324 Trifolium pratense
TWI53G1744 Tripterygium wilfordii
TWI77G0411 Tripterygium wilfordii
unitig_899.g14735 Utricularia gibba
vmacro09196 Vaccinium macrocarpon
vmacro12412 Vaccinium macrocarpon
VMungo1127G1291 Vigna mungo
Zm00001eb066420 Zea mays
Zm00001eb066470 Zea mays

User provided reference genes

Program Settings