Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33220 Brassica napus
A05p44040 Brassica napus
A10p22230 Brassica napus
Aa31LG5G13630 Aethionema arabicum
Actinidia08730 Actinidia chinensis
Actinidia08732 Actinidia chinensis
Actinidia18695 Actinidia chinensis
Actinidia28268 Actinidia chinensis
Actinidia34296 Actinidia chinensis
Ah.04g157330 Amaranthus hybridus
Ah.13g071140 Amaranthus hybridus
Ah.13g071180 Amaranthus hybridus
AL3G12760 Arabidopsis lyrata
AL6G28210 Arabidopsis lyrata
Aqoxy161s001 Aquilegia oxysepala
Aqoxy161s002 Aquilegia oxysepala
Aqoxy3G02065 Aquilegia oxysepala
Aqoxy3G02066 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F45BIC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I6057L Arachis hypogaea
AT3G03150 Arabidopsis thaliana
AT5G17165 Arabidopsis thaliana
ATR0829G020 Amborella trichopoda
Atru.chr12.2033 Acer truncatum
AUR62005925 Chenopodium quinoa
AUR62018884 Chenopodium quinoa
AUR62028136 Chenopodium quinoa
BcaB04g19374 Brassica carinata
BcaB08g36801 Brassica carinata
BcaC01g04411 Brassica carinata
BcaC04g18828 Brassica carinata
BcaC05g30524 Brassica carinata
BolC3t16311H Brassica oleracea
BolC5t35035H Brassica oleracea
BolC9t58839H Brassica oleracea
BraA03t12494Z Brassica rapa
BraA10t44282Z Brassica rapa
BraSC90t46707Z Brassica rapa
C03p40480 Brassica napus
C05p63660 Brassica napus
C09p60040 Brassica napus
CAN.G303.68 Capsicum annuum
CANSAT21G0974 Cannabis sativa
CARHR077170 Cardamine hirsuta
CARHR196060 Cardamine hirsuta
Carub.0003s0230 Capsella rubella
Carub.0006s1535 Capsella rubella
Ca_24466_v3 Cicer arietinum L.
Cc02_g00450 Coffea canephora
Cc05_g00720 Coffea canephora
CDE01G0008 Ceratophyllum demersum
CDE02G0247 Ceratophyllum demersum
CDE11G0498 Ceratophyllum demersum
CDE12G0763 Ceratophyllum demersum
Cfa015910 Carpinus fangiana
Ciclev10013115m.g Citrus clementina
CiPaw.05G236400 Carya illinoinensis
CiPaw.06G020500 Carya illinoinensis
ClCG01G004940 Citrullus lanatus
ClCG07G017260 Citrullus lanatus
ClCG07G017270 Citrullus lanatus
COL.COLO4_08909 Corchorus olitorius
Cpa.g.sc39.41 Carica papaya
CsaV3_4G004470 Cucumis sativus L.
CsaV3_5G005170 Cucumis sativus L.
CSS0018534 Camellia sinensis var. sinensis
CSS0031198 Camellia sinensis var. sinensis
DCAR_010550 Daucus carota
Dinv17270 Davidia involucrata
Dinv29178 Davidia involucrata
Duzib106G0206 Durio zibethinus
Duzib128G1398 Durio zibethinus
Duzib177G0010 Durio zibethinus
ECA232G0247 Erigeron canadensis
ECA232G3842 Erigeron canadensis
EL10Ac3g05109 Beta vulgaris
Eucgr.A02954 Eucalyptus grandis
Eucgr.A02956 Eucalyptus grandis
Eucgr.K00100 Eucalyptus grandis
Eucgr.L03660 Eucalyptus grandis
FAN01G2998 Fragaria x ananassa
FAN03G1827 Fragaria x ananassa
FAN10G0119 Fragaria x ananassa
FAN10G2200 Fragaria x ananassa
FvH4_7g33540 Fragaria vesca
Glyma.01G230200 Glycine max
Glyma.11G013200 Glycine max
Gohir.A02G139000 Gossypium hirsutum
Gohir.D03G049600 Gossypium hirsutum
Gorai.003G051000 Gossypium raimondii
GSVIVG01024455001 Vitis vinifera
HanXRQChr02g0041191 Helianthus annuus
HanXRQChr02g0046751 Helianthus annuus
HanXRQChr05g0137871 Helianthus annuus
HanXRQChr09g0257211 Helianthus annuus
Haze_00584 Corylus avellana
Hma1.2p1_0758F.1_g213540 Hydrangea macrophylla
Hma1.2p1_1235F.1_g269160 Hydrangea macrophylla
HPP92_014706 Vanilla planifolia
HPP92_014744 Vanilla planifolia
HPP92_020881 Vanilla planifolia
HPP92_020885 Vanilla planifolia
HPP92_028110 Vanilla planifolia
Hund09766 Selenicereus undatus
Hund21085 Selenicereus undatus
LjContig00222g0008170 Lotus japonicus
Lsat_1_v5_gn_0_9420 Lactuca sativa
Lsat_1_v5_gn_0_9440 Lactuca sativa
Manes.08G164900 Manihot esculenta
Manes.09G123900 Manihot esculenta
MBI04_g21153_MAGBIO Magnolia biondii
MD01G1233000 Malus domestica
MD07G1305300 Malus domestica
Medtr5g008210 Medicago truncatula
MELO3C005442.2 Cucumis melo
MELO3C017620.2 Cucumis melo
Migut.F00107 Erythranthe guttata
Migut.F00955 Erythranthe guttata
MSTRG.14 Avicennia marina
MSTRG.26939 Avicennia marina
MSTRG.8553 Avicennia marina
Nitab4.5_0000021g0300 Nicotiana tabacum
Nitab4.5_0000115g0310 Nicotiana tabacum
Nitab4.5_0000115g0330 Nicotiana tabacum
Nitab4.5_0000750g0030 Nicotiana tabacum
Nitab4.5_0002302g0040 Nicotiana tabacum
Nitab4.5_0003012g0010 Nicotiana tabacum
Nitab4.5_0006270g0010 Nicotiana tabacum
Nn1g02028 Nelumbo nucifera
Nn3g19269 Nelumbo nucifera
Oeu038117.1 Olea europaea
Oeu055446.1 Olea europaea
Oeu061060.1 Olea europaea
Oeu063742.2 Olea europaea
Os04g0598000 Oryza sativa ssp. japonica
Peaxi162Scf00133g00111 Petunia axillaris
Peaxi162Scf00815g00235 Petunia axillaris
Peaxi162Scf00815g00250 Petunia axillaris
Peaxi162Scf01650g00057 Petunia axillaris
PGR042G3489 Punica granatum
PGR142G3032 Punica granatum
PGSC0003DMG400000541 Solanum tuberosum
PGSC0003DMG400026933 Solanum tuberosum
PGSC0003DMG400027031 Solanum tuberosum
Phvul.002G036900 Phaseolus vulgaris
Potri.013G081700 Populus trichocarpa
Prupe.2G323400 Prunus persica
Psat2g187520 Pisum sativum
PSO063G2386 Papaver somniferum
PSO170G2965 Papaver somniferum
QL09p026459 Quercus lobata
RcHm_v2.0_Chr1g0383761 Rosa chinensis
Rhsim03G0219900 Rhododendron simsii
Rhsim09G0211800 Rhododendron simsii
Sabra13G0071400 Salix brachista
SalBow2G2852 Salvia bowleyana
Sc13g0010720 Simmondsia chinensis
Sc19g0000280 Simmondsia chinensis
Sed0007086 Sechium edule
Sed0014997 Sechium edule
Sed0022343 Sechium edule
Sed0022386 Sechium edule
SEGI_00089 Sequoiadendron giganteum
SEGI_16015 Sequoiadendron giganteum
SEGI_20020 Sequoiadendron giganteum
SEGI_37277 Sequoiadendron giganteum
SGA_v2.0_scaffold165G38224 Striga asiatica
SGA_v2.0_scaffold18G08501 Striga asiatica
Solyc03g096840.4 Solanum lycopersicum
Solyc06g072840.3 Solanum lycopersicum
Solyc06g072845.1 Solanum lycopersicum
Sopen03g027580 Solanum pennellii
Sopen06g029220 Solanum pennellii
Sopen06g029230 Solanum pennellii
Sp3g02190 Schrenkiella parvula
Sp6g27060 Schrenkiella parvula
TAR375G0874 Trochodendron aralioides
TAR629G1675 Trochodendron aralioides
THA.LOC104827220 Tarenaya hassleriana
Thecc.05G207700 Theobroma cacao
Thhalv10017419m.g Eutrema salsugineum
Thhalv10021768m.g Eutrema salsugineum
TPR.G37953 Trifolium pratense
TWI32G0722 Tripterygium wilfordii
TWI34G2026 Tripterygium wilfordii
unitig_0.g1634 Utricularia gibba
unitig_62.g23842 Utricularia gibba
vmacro06490 Vaccinium macrocarpon
vmacro10180 Vaccinium macrocarpon
VMungo1215G0435 Vigna mungo
Zm00001eb430170 Zea mays

User provided reference genes

Program Settings