Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p23360 Brassica napus
A03p48340 Brassica napus
Aa31LG1G13800 Aethionema arabicum
Actinidia20793 Actinidia chinensis
Actinidia31628 Actinidia chinensis
Ah.15g090010 Amaranthus hybridus
AL5G32020 Arabidopsis lyrata
Aqoxy4G02429 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IRJT2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.US8I5D Arachis hypogaea
AT3G51580 Arabidopsis thaliana
ATR1127G101 Amborella trichopoda
Atru.chr8.113 Acer truncatum
AUR62006418 Chenopodium quinoa
AUR62029766 Chenopodium quinoa
BcaC06g33027 Brassica carinata
BolC1t02831H Brassica oleracea
BolC7t45155H Brassica oleracea
BraA03t13942Z Brassica rapa
C01p29000 Brassica napus
C07p46370 Brassica napus
CANSAT56G1879 Cannabis sativa
CARHR161170 Cardamine hirsuta
Carub.0005s1794 Capsella rubella
Ca_02266_v3 Cicer arietinum L.
Cc02_g05350 Coffea canephora
CDE04G2629 Ceratophyllum demersum
CDE04G3060 Ceratophyllum demersum
Cfa017032 Carpinus fangiana
Ciclev10011425m.g Citrus clementina
Ciclev10032400m.g Citrus clementina
CiPaw.09G221500 Carya illinoinensis
ClCG10G022760 Citrullus lanatus
ClCG11G005660 Citrullus lanatus
COL.COLO4_06482 Corchorus olitorius
COL.COLO4_06483 Corchorus olitorius
COL.COLO4_19418 Corchorus olitorius
Cpa.g.sc19.55 Carica papaya
Cpa.g.sc86.55 Carica papaya
Cpa.g.sc86.56 Carica papaya
CsaV3_3G033050 Cucumis sativus L.
CsaV3_6G002320 Cucumis sativus L.
CSS0028706 Camellia sinensis var. sinensis
CSS0030619 Camellia sinensis var. sinensis
DCAR_014664 Daucus carota
DCAR_018039 Daucus carota
DCAR_028921 Daucus carota
Dinv16976 Davidia involucrata
Dinv21848 Davidia involucrata
Dinv25345 Davidia involucrata
Dinv34487 Davidia involucrata
Duzib114G0452 Durio zibethinus
Duzib151G0965 Durio zibethinus
Duzib212G0017 Durio zibethinus
ECA238G2532 Erigeron canadensis
EL10Ac7g17103 Beta vulgaris
Eucgr.A00727 Eucalyptus grandis
Eucgr.G03139 Eucalyptus grandis
FAN01G0495 Fragaria x ananassa
FAN01G2228 Fragaria x ananassa
FAN02G1320 Fragaria x ananassa
FAN03G0179 Fragaria x ananassa
FAN03G2839 Fragaria x ananassa
FAN04G1547 Fragaria x ananassa
FAN05G0190 Fragaria x ananassa
FAN05G1200 Fragaria x ananassa
FAN05G4521 Fragaria x ananassa
FAN06G0001 Fragaria x ananassa
FAN06G0908 Fragaria x ananassa
FAN06G3204 Fragaria x ananassa
FAN08G1528 Fragaria x ananassa
FAN08G2060 Fragaria x ananassa
FAN09G1607 Fragaria x ananassa
FAN10G1877 Fragaria x ananassa
FAN11G1012 Fragaria x ananassa
FAN11G3997 Fragaria x ananassa
FAN12G1450 Fragaria x ananassa
FAN12G3323 Fragaria x ananassa
FAN13G0234 Fragaria x ananassa
FAN14G2282 Fragaria x ananassa
FAN16G3315 Fragaria x ananassa
FAN19G0584 Fragaria x ananassa
FAN19G1981 Fragaria x ananassa
FAN21G1371 Fragaria x ananassa
FAN21G2041 Fragaria x ananassa
FAN23G0341 Fragaria x ananassa
FAN24G1084 Fragaria x ananassa
FAN24G2938 Fragaria x ananassa
FAN26G1149 Fragaria x ananassa
FAN26G2091 Fragaria x ananassa
FvH4_1g23991 Fragaria vesca
FvH4_3g29832 Fragaria vesca
FvH4_6g09850 Fragaria vesca
Glyma.09G274700 Glycine max
Glyma.18G213700 Glycine max
Gohir.A02G003200 Gossypium hirsutum
Gohir.A05G402800 Gossypium hirsutum
Gohir.A10G150900 Gossypium hirsutum
Gohir.D02G003600 Gossypium hirsutum
Gohir.D04G012700 Gossypium hirsutum
Gohir.D10G115400 Gossypium hirsutum
Gorai.005G004100 Gossypium raimondii
Gorai.011G127100 Gossypium raimondii
Gorai.012G015000 Gossypium raimondii
GSVIVG01030180001 Vitis vinifera
GSVIVG01032671001 Vitis vinifera
HanXRQChr07g0204121 Helianthus annuus
HanXRQChr10g0287531 Helianthus annuus
Haze_21177 Corylus avellana
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla
HPP92_015592 Vanilla planifolia
Hund03699 Selenicereus undatus
Lalb_Chr01g0023761 Lupinus albus
Lj1g0021012 Lotus japonicus
Lj8A54T74 Lonicera japonica
Lsat_1_v5_gn_2_126280 Lactuca sativa
Lsat_1_v5_gn_9_38921 Lactuca sativa
Manes.08G171100 Manihot esculenta
Manes.09G118000 Manihot esculenta
Manes.10G001600 Manihot esculenta
MBI15_g01602_MAGBIO Magnolia biondii
MD04G1174800 Malus domestica
MD12G1188500 Malus domestica
Medtr7g073280 Medicago truncatula
MELO3C020009.2 Cucumis melo
Migut.F01242 Erythranthe guttata
Migut.J00036 Erythranthe guttata
MSTRG.169 Avicennia marina
MSTRG.5498 Avicennia marina
Nitab4.5_0000048g0030 Nicotiana tabacum
Nitab4.5_0000375g0230 Nicotiana tabacum
Nitab4.5_0002279g0060 Nicotiana tabacum
Nitab4.5_0004433g0040 Nicotiana tabacum
Nn1g02337 Nelumbo nucifera
Nn2g10296 Nelumbo nucifera
Nn5g26845 Nelumbo nucifera
Oeu006056.1 Olea europaea
Oeu044185.1 Olea europaea
Oeu057996.1 Olea europaea
Oeu057998.1 Olea europaea
Oeu060212.1 Olea europaea
Os05g0478200 Oryza sativa ssp. japonica
Peaxi162Scf00167g01218 Petunia axillaris
Peaxi162Scf00732g00259 Petunia axillaris
PGR031G3776 Punica granatum
PGR142G3587 Punica granatum
PGSC0003DMG400011643 Solanum tuberosum
PGSC0003DMG400026790 Solanum tuberosum
Phvul.008G082600 Phaseolus vulgaris
Potri.006G108400 Populus trichocarpa
Potri.016G136900 Populus trichocarpa
Potri.019G058400 Populus trichocarpa
Prupe.6G293800 Prunus persica
Psat3g118720 Pisum sativum
PSO170G6362 Papaver somniferum
QL07p032102 Quercus lobata
RcHm_v2.0_Chr3g0460451 Rosa chinensis
Rhsim03G0152300 Rhododendron simsii
Rhsim03G0152700 Rhododendron simsii
Rhsim04G0121600 Rhododendron simsii
Sabra04G0153600 Salix brachista
Sabra06G0084600 Salix brachista
Sabra19G0073800 Salix brachista
SalBow5G3966 Salvia bowleyana
SalBow5G5138 Salvia bowleyana
Sc20g0006980 Simmondsia chinensis
Sed0000514 Sechium edule
Sed0000653 Sechium edule
Sed0028030 Sechium edule
SEGI_11810 Sequoiadendron giganteum
SGA_v2.0_scaffold85G26610 Striga asiatica
Solyc05g052210.3 Solanum lycopersicum
Solyc09g015530.3 Solanum lycopersicum
Sopen05g030750 Solanum pennellii
Sopen09g009460 Solanum pennellii
Sp5g10690 Schrenkiella parvula
TAR369G0333 Trochodendron aralioides
TAR633G1241 Trochodendron aralioides
THA.LOC104806162 Tarenaya hassleriana
Thecc.04G151400 Theobroma cacao
Thecc.10G179400 Theobroma cacao
Thhalv10010441m.g Eutrema salsugineum
TPR.G14123 Trifolium pratense
TWI74G0182 Tripterygium wilfordii
TWI77G0120 Tripterygium wilfordii
unitig_578.g15914 Utricularia gibba
vmacro06893 Vaccinium macrocarpon
vmacro08941 Vaccinium macrocarpon
VMungo1383G2329 Vigna mungo
Zm00001eb290650 Zea mays
Zm00001eb352040 Zea mays

User provided reference genes

Program Settings