Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p07660 Brassica napus
A10p22770 Brassica napus
Aa31LG11G13320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis
Actinidia22096 Actinidia chinensis
Actinidia22485 Actinidia chinensis
Actinidia30566 Actinidia chinensis
Ah.04g159420 Amaranthus hybridus
AL6G27200 Arabidopsis lyrata
Aqoxy6G00271 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0G6L2R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7UC7Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M5IQ0Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SH19F5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z3CST4 Arachis hypogaea
AT5G16300 Arabidopsis thaliana
ATR0743G251 Amborella trichopoda
Atru.chr10.105 Acer truncatum
Atru.chr10.106 Acer truncatum
Atru.chr10.123 Acer truncatum
Atru.chr10.124 Acer truncatum
AUR62000253 Chenopodium quinoa
AUR62006600 Chenopodium quinoa
BcaB01g04993 Brassica carinata
BcaB04g17891 Brassica carinata
BcaC04g18881 Brassica carinata
BcaC04g18885 Brassica carinata
BcaC04g18891 Brassica carinata
BcaC04g20230 Brassica carinata
BcaNung02234 Brassica carinata
BolC3t13385H Brassica oleracea
BolC9t58909H Brassica oleracea
BraA03t10094Z Brassica rapa
BraA10t44342Z Brassica rapa
C03p08900 Brassica napus
C09p60740 Brassica napus
CAN.G438.18 Capsicum annuum
CANSAT64G0454 Cannabis sativa
CARHR197010 Cardamine hirsuta
Carub.0006s1449 Capsella rubella
Ca_10488_v3 Cicer arietinum L.
CBR_g38824 Chara braunii
Cc06_g21420 Coffea canephora
CDE02G3888 Ceratophyllum demersum
CDE04G2219 Ceratophyllum demersum
Cfa002307 Carpinus fangiana
Cfa002308 Carpinus fangiana
Ciclev10014110m.g Citrus clementina
CiPaw.04G180400 Carya illinoinensis
ClCG11G011150 Citrullus lanatus
COL.COLO4_02821 Corchorus olitorius
Cpa.g.c39794 Carica papaya
Cpa.g.sc272.6 Carica papaya
Cpa.g.sc440.1 Carica papaya
Cre14.g628050 Chlamydomonas reinhardtii
CsaV3_2G009280 Cucumis sativus L.
CSS0030366 Camellia sinensis var. sinensis
DCAR_019887 Daucus carota
Dinv14589 Davidia involucrata
Dinv14590 Davidia involucrata
Dinv20243 Davidia involucrata
Duzib140G0001 Durio zibethinus
ECA248G2481 Erigeron canadensis
EL10Ac4g10045 Beta vulgaris
Eucgr.A01176 Eucalyptus grandis
Eucgr.G00871 Eucalyptus grandis
FAN04G1111 Fragaria x ananassa
FAN08G0025 Fragaria x ananassa
FAN13G3018 Fragaria x ananassa
FAN18G2191 Fragaria x ananassa
FvH4_3g34230 Fragaria vesca
FvH4_5g28760 Fragaria vesca
Glyma.10G201900 Glycine max
Glyma.20G188500 Glycine max
Gohir.A04G049300 Gossypium hirsutum
Gohir.A05G405500 Gossypium hirsutum
Gohir.D04G010100 Gossypium hirsutum
Gohir.D05G331100 Gossypium hirsutum
Gorai.009G355000 Gossypium raimondii
Gorai.012G011900 Gossypium raimondii
GSVIVG01006267001 Vitis vinifera
HanXRQChr01g0024861 Helianthus annuus
HanXRQChr12g0356901 Helianthus annuus
Haze_24513 Corylus avellana
HPP92_017521 Vanilla planifolia
Hund21939 Selenicereus undatus
Lalb_Chr02g0151301 Lupinus albus
Lalb_Chr21g0313211 Lupinus albus
Lalb_Chr21g0313231 Lupinus albus
Lj2A356T45 Lonicera japonica
Lj5g0021899 Lotus japonicus
Lsat_1_v5_gn_1_58860 Lactuca sativa
Manes.13G155600 Manihot esculenta
Mapoly0006s0304 Marchantia polymorpha
MBI18_g04901_MAGBIO Magnolia biondii
MCO16G457 Micromonas commoda
MD08G1237500 Malus domestica
MD15G1429400 Malus domestica
Medtr1g492710 Medicago truncatula
Medtr1g492720 Medicago truncatula
MELO3C008782.2 Cucumis melo
Migut.J00662 Erythranthe guttata
MSTRG.19281 Avicennia marina
Nitab4.5_0000001g0420 Nicotiana tabacum
Nitab4.5_0000693g0020 Nicotiana tabacum
Nn1g09424 Nelumbo nucifera
Nn5g28173 Nelumbo nucifera
Oeu011931.1 Olea europaea
Oeu055491.1 Olea europaea
Os01g0777000 Oryza sativa ssp. japonica
Peaxi162Scf00076g00824 Petunia axillaris
PGR042G2902 Punica granatum
PGSC0003DMG400002624 Solanum tuberosum
Phvul.007G105200 Phaseolus vulgaris
Potri.008G079700 Populus trichocarpa
Potri.010G177200 Populus trichocarpa
Pp3c18_6580 Physcomitrium patens
Pp3c21_18130 Physcomitrium patens
Pp3c22_14630 Physcomitrium patens
PRCOL_00004619 Prasinoderma coloniale
Prupe.1G575000 Prunus persica
Psat6g176280 Pisum sativum
PSO063G3475 Papaver somniferum
PSO063G6607 Papaver somniferum
PSO675G0774 Papaver somniferum
PSO732G0238 Papaver somniferum
QL01p005312 Quercus lobata
QL01p051611 Quercus lobata
QL01p051624 Quercus lobata
QL01p051634 Quercus lobata
RcHm_v2.0_Chr7g0220971 Rosa chinensis
Rhsim04G0086300 Rhododendron simsii
Sabra08G0059400 Salix brachista
Sabra10G0136200 Salix brachista
Sc16g0010760 Simmondsia chinensis
Sed0017385 Sechium edule
Sed0022441 Sechium edule
SEGI_00259 Sequoiadendron giganteum
SEGI_00546 Sequoiadendron giganteum
SEGI_01451 Sequoiadendron giganteum
SEGI_02361 Sequoiadendron giganteum
SEGI_02603 Sequoiadendron giganteum
SEGI_06299 Sequoiadendron giganteum
SEGI_07846 Sequoiadendron giganteum
SEGI_09994 Sequoiadendron giganteum
SEGI_10162 Sequoiadendron giganteum
SEGI_10836 Sequoiadendron giganteum
SEGI_12986 Sequoiadendron giganteum
SEGI_13143 Sequoiadendron giganteum
SEGI_13193 Sequoiadendron giganteum
SEGI_17593 Sequoiadendron giganteum
SEGI_18317 Sequoiadendron giganteum
SEGI_20620 Sequoiadendron giganteum
SEGI_21118 Sequoiadendron giganteum
SEGI_21703 Sequoiadendron giganteum
SEGI_22494 Sequoiadendron giganteum
SEGI_23236 Sequoiadendron giganteum
SEGI_26119 Sequoiadendron giganteum
SEGI_32072 Sequoiadendron giganteum
SEGI_37648 Sequoiadendron giganteum
SEGI_37860 Sequoiadendron giganteum
SEGI_40013 Sequoiadendron giganteum
SEGI_40357 Sequoiadendron giganteum
SEGI_40445 Sequoiadendron giganteum
SEGI_41100 Sequoiadendron giganteum
SEGI_41102 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06689 Striga asiatica
SGA_v2.0_scaffold1489G53965 Striga asiatica
SGA_v2.0_scaffold31G12887 Striga asiatica
SGA_v2.0_scaffold31G12889 Striga asiatica
SHI02481 Sapria himalayana
SMO116G0219 Selaginella moellendorffii
Solyc03g120700.3 Solanum lycopersicum
Sopen03g039520 Solanum pennellii
Sp6g27860 Schrenkiella parvula
TAR362G0544 Trochodendron aralioides
TAR633G0565 Trochodendron aralioides
THA.LOC104820933 Tarenaya hassleriana
Thecc.05G131900 Theobroma cacao
Thhalv10012518m.g Eutrema salsugineum
TPR.G2546 Trifolium pratense
TPR.G7717 Trifolium pratense
TWI53G0960 Tripterygium wilfordii
unitig_749.g14304 Utricularia gibba
vmacro09152 Vaccinium macrocarpon
VMungo0720G1645 Vigna mungo
VMungo1383G0656 Vigna mungo
Zm00001eb151630 Zea mays
Zm00001eb369950 Zea mays

User provided reference genes

Program Settings