Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p32070 Brassica napus
A08p04710 Brassica napus
Aa31LG8G4650 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5556 Anthoceros agrestis
Actinidia34663 Actinidia chinensis
Ah.14g085880 Amaranthus hybridus
AL1G55060 Arabidopsis lyrata
AL3G30930 Arabidopsis lyrata
Aqoxy3G00001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7TIF1A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N38075 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SGC6ES Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U86FK3 Arachis hypogaea
AT1G48430 Arabidopsis thaliana
AT3G17770 Arabidopsis thaliana
ATR0598G272 Amborella trichopoda
Atru.chr9.1578_Atru.chr9.1579 Acer truncatum
AUR62034013 Chenopodium quinoa
AUR62038598 Chenopodium quinoa
AUR62038599 Chenopodium quinoa
BcaB04g17424 Brassica carinata
BcaB04g17425 Brassica carinata
BcaC07g37135 Brassica carinata
BcaNung05880 Brassica carinata
BolC5t33210H Brassica oleracea
BolC5t33211H Brassica oleracea
BolC5t33593H Brassica oleracea
BolC8t47313H Brassica oleracea
BraA05t21814Z Brassica rapa
BraA05t21815Z Brassica rapa
BraA05t21823Z Brassica rapa
BraA05t21824Z Brassica rapa
BraA05t22036Z Brassica rapa
BraA08t32501Z Brassica rapa
C05p44830 Brassica napus
C05p48570 Brassica napus
C08p05080 Brassica napus
CAN.G65.87 Capsicum annuum
CANSAT56G2203 Cannabis sativa
CANSAT56G3429 Cannabis sativa
CARHR038050 Cardamine hirsuta
CARHR093110 Cardamine hirsuta
CARHR123810 Cardamine hirsuta
Carub.0001s3756 Capsella rubella
Carub.0003s1749 Capsella rubella
Ca_20292_v3 Cicer arietinum L.
CBR_g4012 Chara braunii
Cc04_g09210 Coffea canephora
Cc04_g09220 Coffea canephora
CDE06G0014 Ceratophyllum demersum
Cfa023793 Carpinus fangiana
Ciclev10019405m.g Citrus clementina
CiPaw.15G149000 Carya illinoinensis
CiPaw.16G098300 Carya illinoinensis
ClCG04G012750 Citrullus lanatus
ClCG04G012770 Citrullus lanatus
ClCG04G012780 Citrullus lanatus
ClCG04G012790 Citrullus lanatus
COL.COLO4_24456 Corchorus olitorius
Cpa.g.sc3.337 Carica papaya
Cre13.g607450 Chlamydomonas reinhardtii
CsaV3_1G004890 Cucumis sativus L.
CSS0000253 Camellia sinensis var. sinensis
DCAR_011388 Daucus carota
Dinv07799 Davidia involucrata
Duzib084G0133 Durio zibethinus
Duzib205G0446 Durio zibethinus
ECA233G2231 Erigeron canadensis
EL10Ac8g19495 Beta vulgaris
Eucgr.E02122 Eucalyptus grandis
Eucgr.H00571 Eucalyptus grandis
Eucgr.K02291 Eucalyptus grandis
FAN04G1919 Fragaria x ananassa
FAN08G1300 Fragaria x ananassa
FAN13G2047 Fragaria x ananassa
FAN18G3127 Fragaria x ananassa
FvH4_5g17820 Fragaria vesca
Glyma.07G107100 Glycine max
Glyma.09G170600 Glycine max
Glyma.15G201250 Glycine max
Glyma.18G156700 Glycine max
Gohir.A03G091600 Gossypium hirsutum
Gohir.A07G060800 Gossypium hirsutum
Gohir.D02G120000 Gossypium hirsutum
Gohir.D07G065501 Gossypium hirsutum
Gorai.001G069000 Gossypium raimondii
Gorai.005G134000 Gossypium raimondii
GSVIVG01012941001 Vitis vinifera
HanXRQChr03g0087091 Helianthus annuus
Haze_18948 Corylus avellana
Hma1.2p1_0385F.1_g141530 Hydrangea macrophylla
Hma1.2p1_0385F.1_g141540 Hydrangea macrophylla
Hma1.2p1_0471F.1_g159320 Hydrangea macrophylla
Hma1.2p1_1785F.1_g302226 Hydrangea macrophylla
HPP92_013127 Vanilla planifolia
HPP92_013151 Vanilla planifolia
Hund22317 Selenicereus undatus
Hund22318 Selenicereus undatus
Lalb_Chr14g0370481 Lupinus albus
Lalb_Chr14g0370491 Lupinus albus
Lalb_Chr14g0370501 Lupinus albus
Lalb_Chr14g0370511 Lupinus albus
Lalb_Chr24g0398301 Lupinus albus
Lj1g0020491 Lotus japonicus
Lj2g0001753 Lotus japonicus
Lj2g0026679 Lotus japonicus
Lj3g0016828 Lotus japonicus
Lj5A164G66 Lonicera japonica
Lj5g0002346 Lotus japonicus
Lsat_1_v5_gn_1_111321 Lactuca sativa
Lsat_1_v5_gn_3_63580 Lactuca sativa
Lsat_1_v5_gn_5_120780 Lactuca sativa
Lsat_1_v5_gn_5_188701 Lactuca sativa
Lsat_1_v5_gn_6_16260 Lactuca sativa
Lsat_1_v5_gn_6_17001 Lactuca sativa
Lsat_1_v5_gn_7_12281 Lactuca sativa
Lsat_1_v5_gn_8_1741 Lactuca sativa
Lsat_1_v5_gn_8_41041 Lactuca sativa
Manes.06G001700 Manihot esculenta
Mapoly0125s0006 Marchantia polymorpha
MBI13_g21695_MAGBIO Magnolia biondii
MCO02G001 Micromonas commoda
MD06G1234200 Malus domestica
MD14G1240900 Malus domestica
Medtr6g073003 Medicago truncatula
MELO3C001926.2 Cucumis melo
Migut.D01207 Erythranthe guttata
MSTRG.9359 Avicennia marina
Nitab4.5_0000033g0340 Nicotiana tabacum
Nitab4.5_0003127g0010 Nicotiana tabacum
Nn3g19567 Nelumbo nucifera
Nn4g24545 Nelumbo nucifera
Oeu016195.1 Olea europaea
Oeu023523.1 Olea europaea
Oeu023525.2 Olea europaea
Os03g0719300 Oryza sativa ssp. japonica
Peaxi162Scf00643g00664 Petunia axillaris
PGR044G2375 Punica granatum
PGR083G0897 Punica granatum
PGSC0003DMG400026957 Solanum tuberosum
Phvul.004G146300 Phaseolus vulgaris
Potri.011G011650 Populus trichocarpa
Potri.012G041100 Populus trichocarpa
Potri.015G032500 Populus trichocarpa
Pp3c10_19150 Physcomitrium patens
Pp3c3_29160 Physcomitrium patens
Pp3c4_4070 Physcomitrium patens
PRCOL_00004885 Prasinoderma coloniale
Prupe.5G238700 Prunus persica
Psat0s1042g0080 Pisum sativum
Psat1g124800 Pisum sativum
Psat7g138600 Pisum sativum
PSO017G1464 Papaver somniferum
PSO478G0806 Papaver somniferum
QL10p037085 Quercus lobata
QL10p037250 Quercus lobata
QL10p038058 Quercus lobata
RcHm_v2.0_Chr7g0177761 Rosa chinensis
Rhsim08G0128400 Rhododendron simsii
Sabra12G0028200 Salix brachista
Sabra15G0026700 Salix brachista
SabraUnG0005900 Salix brachista
SalBow1G2020 Salvia bowleyana
Sc10g0008960 Simmondsia chinensis
Sed0003427 Sechium edule
SEGI_07046 Sequoiadendron giganteum
SEGI_15841 Sequoiadendron giganteum
SEGI_25290 Sequoiadendron giganteum
SEGI_32565 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15653 Striga asiatica
SGA_v2.0_scaffold67G22627 Striga asiatica
SGA_v2.0_scaffold74G24677 Striga asiatica
SMO230G0064 Selaginella moellendorffii
Solyc06g072380.3 Solanum lycopersicum
Sopen06g028750 Solanum pennellii
Sopen09g023790 Solanum pennellii
Sopen11g021990 Solanum pennellii
Sp1g35380 Schrenkiella parvula
Sp3g15890 Schrenkiella parvula
TAR028G0001 Trochodendron aralioides
Thecc.03G066100 Theobroma cacao
Thhalv10011337m.g Eutrema salsugineum
Thhalv10020350m.g Eutrema salsugineum
TPR.G31707 Trifolium pratense
TWI15G0294 Tripterygium wilfordii
TWI60G0145 Tripterygium wilfordii
unitig_736.g22827 Utricularia gibba
vmacro17765 Vaccinium macrocarpon
vmacro17766 Vaccinium macrocarpon
VMungo0464G0093 Vigna mungo
VMungo1383G3479 Vigna mungo

User provided reference genes

Program Settings