Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p22200 Brassica napus
A07p22210 Brassica napus
A09p47580 Brassica napus
Aa31LG2G6060 Aethionema arabicum
Aa31LG8G7140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1577 Anthoceros agrestis
Actinidia00223 Actinidia chinensis
Actinidia17466 Actinidia chinensis
Actinidia39059 Actinidia chinensis
Ah.10g033260 Amaranthus hybridus
AL5G35710 Arabidopsis lyrata
Aqoxy2G02351 Aquilegia oxysepala
Aqoxy2G02352 Aquilegia oxysepala
Aqoxy2G04052 Aquilegia oxysepala
Aqoxy2G04053 Aquilegia oxysepala
Aqoxy7G03366 Aquilegia oxysepala
Aqoxy7G03367 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7PH810 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZN95YA Arachis hypogaea
AT3G54630 Arabidopsis thaliana
ATR0193G025 Amborella trichopoda
ATR0193G049 Amborella trichopoda
ATR0686G029 Amborella trichopoda
ATR0686G046 Amborella trichopoda
Atru.chr6.1000 Acer truncatum
Atru.chr6.1018 Acer truncatum
AUR62033619 Chenopodium quinoa
AUR62038607 Chenopodium quinoa
BcaB01g00173 Brassica carinata
BcaB02g07728 Brassica carinata
BcaC07g39801 Brassica carinata
BcaC08g44691 Brassica carinata
BolC6t37412H Brassica oleracea
BolC8t50589H Brassica oleracea
BraA09t40214Z Brassica rapa
C06p22270 Brassica napus
C08p29780 Brassica napus
CAN.G1352.14 Capsicum annuum
CAN.G1352.18 Capsicum annuum
CANSAT11G1197 Cannabis sativa
CARHR164540 Cardamine hirsuta
Carub.0005s2123 Capsella rubella
Ca_00092_v3 Cicer arietinum L.
Ca_29931_v3 Cicer arietinum L.
CBR_g55876 Chara braunii
Cc02_g22230 Coffea canephora
CDE10G0634 Ceratophyllum demersum
Cfa005568 Carpinus fangiana
Cfa026082 Carpinus fangiana
Ciclev10007743m.g Citrus clementina
CiPaw.05G040600 Carya illinoinensis
CiPaw.05G040700 Carya illinoinensis
CiPaw.06G150300 Carya illinoinensis
ClCG05G009820 Citrullus lanatus
COL.COLO4_33122 Corchorus olitorius
COL.COLO4_34280 Corchorus olitorius
Cpa.g.sc2.28 Carica papaya
Cre02.g098300 Chlamydomonas reinhardtii
CsaV3_3G018800 Cucumis sativus L.
CsaV3_3G021940 Cucumis sativus L.
CsaV3_6G032180 Cucumis sativus L.
CSS0005813 Camellia sinensis var. sinensis
CSS0023378 Camellia sinensis var. sinensis
CSS0048877 Camellia sinensis var. sinensis
DCAR_029239 Daucus carota
Dinv19347 Davidia involucrata
Duzib132G0407 Durio zibethinus
ECA232G1859 Erigeron canadensis
ECA238G3381 Erigeron canadensis
EL10Ac2g02673 Beta vulgaris
Eucgr.G00629 Eucalyptus grandis
Eucgr.G00633 Eucalyptus grandis
FAN04G0507 Fragaria x ananassa
FAN08G2591 Fragaria x ananassa
FAN13G2947 Fragaria x ananassa
FAN18G4487 Fragaria x ananassa
FvH4_5g35831 Fragaria vesca
Glyma.15G048000 Glycine max
Gohir.A01G176500 Gossypium hirsutum
Gohir.A03G210700 Gossypium hirsutum
Gohir.D01G167300 Gossypium hirsutum
Gohir.D02G232300 Gossypium hirsutum
Gorai.002G207800 Gossypium raimondii
Gorai.005G260100 Gossypium raimondii
GSVIVG01013912001 Vitis vinifera
GSVIVG01023023001 Vitis vinifera
GSVIVG01023027001 Vitis vinifera
GSVIVG01023034001 Vitis vinifera
GSVIVG01023046001 Vitis vinifera
GSVIVG01023069001 Vitis vinifera
GSVIVG01023070001 Vitis vinifera
GSVIVG01023076001 Vitis vinifera
GSVIVG01038756001 Vitis vinifera
HanXRQChr03g0066191 Helianthus annuus
HanXRQChr03g0066541 Helianthus annuus
Haze_10786 Corylus avellana
HPP92_025499 Vanilla planifolia
HPP92_025537 Vanilla planifolia
HPP92_025538 Vanilla planifolia
HPP92_026283 Vanilla planifolia
Hund15694 Selenicereus undatus
Lalb_Chr20g0123381 Lupinus albus
Lj1A1063T36 Lonicera japonica
Lj1C1063G12 Lonicera japonica
Lj1g0024840 Lotus japonicus
Lj6g0021493 Lotus japonicus
Lsat_1_v5_gn_4_120921 Lactuca sativa
Lsat_1_v5_gn_4_72880 Lactuca sativa
Lsat_1_v5_gn_9_116440 Lactuca sativa
Lsat_1_v5_gn_9_118160 Lactuca sativa
Manes.07G012900 Manihot esculenta
Mapoly0042s0088 Marchantia polymorpha
MBI06_g22317_MAGBIO Magnolia biondii
MCO01G050 Micromonas commoda
MD08G1226900 Malus domestica
MD15G1419200 Malus domestica
Medtr2g028550 Medicago truncatula
MELO3C006920.2 Cucumis melo
Migut.B00662 Erythranthe guttata
MSTRG.16537 Avicennia marina
Nitab4.5_0003071g0040 Nicotiana tabacum
Nitab4.5_0009907g0020 Nicotiana tabacum
Nn1g00799 Nelumbo nucifera
Nn1g00803 Nelumbo nucifera
Nn1g08562 Nelumbo nucifera
Nn1g08568 Nelumbo nucifera
Nn1g08571 Nelumbo nucifera
Nn7g38100 Nelumbo nucifera
Nn7g38101 Nelumbo nucifera
Oeu000197.1 Olea europaea
Oeu026056.1 Olea europaea
Os08g0468400 Oryza sativa ssp. japonica
Peaxi162Scf00011g01125 Petunia axillaris
PGR042G1741 Punica granatum
PGSC0003DMG400023774 Solanum tuberosum
PGSC0003DMG400029761 Solanum tuberosum
Phvul.006G211900 Phaseolus vulgaris
Potri.001G208700 Populus trichocarpa
Pp3c11_11580 Physcomitrium patens
Pp3c7_8870 Physcomitrium patens
PRCOL_00003819 Prasinoderma coloniale
Prupe.1G564000 Prunus persica
Psat1g170240 Pisum sativum
Psat1g170680 Pisum sativum
PSO017G3053 Papaver somniferum
PSO266G0076 Papaver somniferum
PSO478G2549 Papaver somniferum
PSO478G5278 Papaver somniferum
QL11p018835 Quercus lobata
RcHm_v2.0_Chr4g0408691 Rosa chinensis
RcHm_v2.0_Chr5g0046031 Rosa chinensis
Rhsim11G0132000 Rhododendron simsii
Sabra01G0161000 Salix brachista
Sc20g0004020 Simmondsia chinensis
Sed0026866 Sechium edule
SEGI_09452 Sequoiadendron giganteum
SEGI_11795 Sequoiadendron giganteum
SEGI_20846 Sequoiadendron giganteum
SGA_v2.0_scaffold110G31277 Striga asiatica
SGA_v2.0_scaffold1G00330 Striga asiatica
SHI16565 Sapria himalayana
SMO254G0006 Selaginella moellendorffii
Solyc01g104520.3 Solanum lycopersicum
Solyc01g104570.4 Solanum lycopersicum
Solyc01g150163.1 Solanum lycopersicum
Sopen01g047030 Solanum pennellii
Sopen01g047080 Solanum pennellii
Sp5g07820 Schrenkiella parvula
TAR374G1024 Trochodendron aralioides
THA.LOC104824162 Tarenaya hassleriana
Thecc.02G041600 Theobroma cacao
Thhalv10010243m.g Eutrema salsugineum
TPR.G17513 Trifolium pratense
TWI14G0091 Tripterygium wilfordii
TWI23G0776 Tripterygium wilfordii
unitig_8.g4524 Utricularia gibba
vmacro01788 Vaccinium macrocarpon
VMungo0540G1591 Vigna mungo
Zm00001eb040130 Zea mays
Zm00001eb135950 Zea mays
Zm00001eb226250 Zea mays
Zm00001eb317570 Zea mays
Zm00001eb322170 Zea mays

User provided reference genes

Program Settings