Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p29200 Brassica napus
A07p18160 Brassica napus
A07p19900 Brassica napus
A09p63350 Brassica napus
Aa31LG1G1680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis
Actinidia15111 Actinidia chinensis
Actinidia15112 Actinidia chinensis
Actinidia15113 Actinidia chinensis
Actinidia37450 Actinidia chinensis
AL1G24790 Arabidopsis lyrata
AL2G22720 Arabidopsis lyrata
AL2G22730 Arabidopsis lyrata
AL6G47680 Arabidopsis lyrata
Aqoxy1G03220 Aquilegia oxysepala
Aqoxy5G03687 Aquilegia oxysepala
Aqoxy5G03688 Aquilegia oxysepala
Aqoxy7G03799 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea
AT1G13120 Arabidopsis thaliana
AT4G05523 Arabidopsis thaliana
ATR0824G009 Amborella trichopoda
Atru.chr11.2174 Acer truncatum
AUR62005511 Chenopodium quinoa
AUR62024231 Chenopodium quinoa
BcaC02g08536 Brassica carinata
BcaC02g12092 Brassica carinata
BcaC03g16752 Brassica carinata
BcaC05g25083 Brassica carinata
BcaC05g25084 Brassica carinata
BcaC05g25085 Brassica carinata
BcaC06g34341 Brassica carinata
BcaC06g34342 Brassica carinata
BcaC07g41664 Brassica carinata
BolC4t26878H Brassica oleracea
BolC4t26886H Brassica oleracea
BolC5t29767H Brassica oleracea
BolC8t52217H Brassica oleracea
BraA01t00580Z Brassica rapa
BraA02t07950Z Brassica rapa
BraA06t24057Z Brassica rapa
BraA09t41684Z Brassica rapa
C02p46270 Brassica napus
C03p39130 Brassica napus
C04p53220 Brassica napus
C04p53310 Brassica napus
C05p10220 Brassica napus
C07p30160 Brassica napus
C07p30170 Brassica napus
C08p46780 Brassica napus
CAN.G1572.8 Capsicum annuum
CAN.G189.38 Capsicum annuum
CAN.G294.19 Capsicum annuum
CANSAT01G1926 Cannabis sativa
CANSAT11G1164 Cannabis sativa
CARHR013490 Cardamine hirsuta
CARHR253470 Cardamine hirsuta
Carub.0001s1286 Capsella rubella
CBR_g38118 Chara braunii
Cc11_g16040 Coffea canephora
CDE06G0651 Ceratophyllum demersum
CDE06G1553 Ceratophyllum demersum
CDE06G1606 Ceratophyllum demersum
Ciclev10030923m.g Citrus clementina
CiPaw.02G032100 Carya illinoinensis
CiPaw.06G064800 Carya illinoinensis
ClCG05G026050 Citrullus lanatus
COL.COLO4_23499 Corchorus olitorius
COL.COLO4_27904 Corchorus olitorius
Cpa.g.sc13.88 Carica papaya
Cre06.g300900 Chlamydomonas reinhardtii
CsaV3_5G030790 Cucumis sativus L.
CSS0031984 Camellia sinensis var. sinensis
CSS0039637 Camellia sinensis var. sinensis
CSS0045431 Camellia sinensis var. sinensis
DCAR_026498 Daucus carota
Dinv11043 Davidia involucrata
Dinv15203 Davidia involucrata
Duzib248G0757 Durio zibethinus
EL10Ac1g01653 Beta vulgaris
EL10Ac8g19584 Beta vulgaris
EL10As2g23162 Beta vulgaris
EL10As2g23164 Beta vulgaris
Eucgr.B03244 Eucalyptus grandis
FAN07G1326 Fragaria x ananassa
FAN08G0154 Fragaria x ananassa
FAN08G3485 Fragaria x ananassa
FAN12G2286 Fragaria x ananassa
FAN13G1935 Fragaria x ananassa
FAN17G0862 Fragaria x ananassa
FAN18G0384 Fragaria x ananassa
FAN22G0389 Fragaria x ananassa
FvH4_4g25360 Fragaria vesca
FvH4_5g15741 Fragaria vesca
FvH4_5g15750 Fragaria vesca
Glyma.11G244100 Glycine max
Glyma.18G013000 Glycine max
Gohir.A04G137200 Gossypium hirsutum
Gohir.D04G180400 Gossypium hirsutum
Gorai.012G173500 Gossypium raimondii
GSVIVG01000572001 Vitis vinifera
HanXRQChr08g0208421 Helianthus annuus
Haze_12279 Corylus avellana
Haze_20779 Corylus avellana
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla
Hma1.2p1_1533F.1_g289350 Hydrangea macrophylla
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla
Hund04894 Selenicereus undatus
Lalb_Chr08g0230861 Lupinus albus
Lj3A151T24 Lonicera japonica
Lj3A151T25 Lonicera japonica
Lj4g0018208 Lotus japonicus
Lj6A815G40 Lonicera japonica
Lj6g0027950 Lotus japonicus
Lsat_1_v5_gn_0_32260 Lactuca sativa
Manes.13G020900 Manihot esculenta
Mapoly0004s0250 Marchantia polymorpha
MBI04_g13681_MAGBIO Magnolia biondii
MCO05G059 Micromonas commoda
MD05G1151500 Malus domestica
MD13G1104500 Malus domestica
Medtr3g086460 Medicago truncatula
Medtr7g034350 Medicago truncatula
MELO3C011924.2 Cucumis melo
MELO3C033658.2 Cucumis melo
MELO3C034162.2 Cucumis melo
Migut.K00625 Erythranthe guttata
MSTRG.553 Avicennia marina
Nitab4.5_0000229g0020 Nicotiana tabacum
Nitab4.5_0000229g0040 Nicotiana tabacum
Nitab4.5_0001978g0070 Nicotiana tabacum
Nitab4.5_0002373g0110 Nicotiana tabacum
Nitab4.5_0004117g0010 Nicotiana tabacum
Nn4g22548 Nelumbo nucifera
Oeu038645.2 Olea europaea
Oeu038646.1 Olea europaea
Os02g0596100 Oryza sativa ssp. japonica
Peaxi162Scf00128g00550 Petunia axillaris
PGR102G1250 Punica granatum
PGSC0003DMG400016968 Solanum tuberosum
Phvul.001G256000 Phaseolus vulgaris
Potri.008G183500 Populus trichocarpa
Pp3c9_21420 Physcomitrium patens
PRCOL_00001147 Prasinoderma coloniale
Prupe.1G241900 Prunus persica
Psat5g092360 Pisum sativum
PSO063G1535 Papaver somniferum
PSO063G3251 Papaver somniferum
PSO063G3896 Papaver somniferum
PSO063G4933 Papaver somniferum
PSO339G1213 Papaver somniferum
PSO339G2835 Papaver somniferum
PSO754G0035 Papaver somniferum
QL03p056574 Quercus lobata
QL03p056953 Quercus lobata
QL93p0107_0801 Quercus lobata
RcHm_v2.0_Chr4g0432651 Rosa chinensis
Rhsim12G0107900 Rhododendron simsii
Rhsim12G0108000 Rhododendron simsii
Sabra08G0139700 Salix brachista
Sc04g0009680 Simmondsia chinensis
Sed0006332 Sechium edule
SEGI_05718 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09799 Striga asiatica
SHI04269 Sapria himalayana
SMO367G0645 Selaginella moellendorffii
Solyc04g026000.2 Solanum lycopersicum
Sopen04g013730 Solanum pennellii
Sopen05g008710 Solanum pennellii
Sp1g11650 Schrenkiella parvula
Sp2g10400 Schrenkiella parvula
TAR374G0522 Trochodendron aralioides
TAR374G0931 Trochodendron aralioides
TAR622G0746 Trochodendron aralioides
THA.LOC104805269 Tarenaya hassleriana
Thecc.02G265200 Theobroma cacao
Thhalv10001133m.g Eutrema salsugineum
Thhalv10007079m.g Eutrema salsugineum
TPR.G35967 Trifolium pratense
TWI36G1196 Tripterygium wilfordii
unitig_22.g6425 Utricularia gibba
unitig_22.g6426 Utricularia gibba
vmacro16170 Vaccinium macrocarpon
vmacro16171 Vaccinium macrocarpon
vmacro16172 Vaccinium macrocarpon
vmacro16173 Vaccinium macrocarpon
vmacro17618 Vaccinium macrocarpon
VMungo1383G2895 Vigna mungo
Zm00001eb062020 Zea mays
Zm00001eb212370 Zea mays

User provided reference genes

Program Settings