Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p14820 Brassica napus
A09p42720 Brassica napus
Aa31LG7G6030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1396 Anthoceros agrestis
Actinidia30742 Actinidia chinensis
Actinidia38975 Actinidia chinensis
Ah.01g007150 Amaranthus hybridus
AL1G35460 Arabidopsis lyrata
Aqoxy6G00528 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DJE5AQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G2M5AZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IAZ4XM Arachis hypogaea
AT1G22040 Arabidopsis thaliana
ATR0564G479 Amborella trichopoda
Atru.chr13.1277 Acer truncatum
Atru.chr13.1278 Acer truncatum
Atru.chr6.935 Acer truncatum
AUR62030873 Chenopodium quinoa
BcaB03g14239 Brassica carinata
BcaB03g14240 Brassica carinata
BcaB03g14241 Brassica carinata
BcaB07g32223 Brassica carinata
BcaC05g26130 Brassica carinata
BcaC06g34924 Brassica carinata
BolC5t30805H Brassica oleracea
BolC7t42707H Brassica oleracea
BolC7t42708H Brassica oleracea
BraA07t29223Z Brassica rapa
BraA09t39748Z Brassica rapa
C05p21070 Brassica napus
C07p21770 Brassica napus
CAN.G523.92 Capsicum annuum
CANSAT25G3848 Cannabis sativa
CARHR022390 Cardamine hirsuta
Carub.0001s2158 Capsella rubella
Ca_00122_v3 Cicer arietinum L.
Ca_26312_v3 Cicer arietinum L.
Cc02_g21790 Coffea canephora
CDE05G0901 Ceratophyllum demersum
CDE05G1080 Ceratophyllum demersum
Cfa005633 Carpinus fangiana
Cfa015931 Carpinus fangiana
Ciclev10001023m.g Citrus clementina
Ciclev10001026m.g Citrus clementina
CiPaw.05G038400 Carya illinoinensis
CiPaw.05G232000 Carya illinoinensis
ClCG09G015130 Citrullus lanatus
COL.COLO4_16495 Corchorus olitorius
COL.COLO4_33880 Corchorus olitorius
Cpa.g.c46940 Carica papaya
CsaV3_7G006300 Cucumis sativus L.
CSS0039138 Camellia sinensis var. sinensis
DCAR_021844 Daucus carota
Dinv13055 Davidia involucrata
Dinv24212 Davidia involucrata
Dinv44732 Davidia involucrata
Duzib093G1202 Durio zibethinus
Duzib116G0614 Durio zibethinus
Duzib132G0496 Durio zibethinus
Duzib248G0126 Durio zibethinus
Duzib248G1633 Durio zibethinus
ECA240G1329 Erigeron canadensis
EL10Ac9g22170 Beta vulgaris
Eucgr.A00117 Eucalyptus grandis
FAN04G0345 Fragaria x ananassa
FAN04G1207 Fragaria x ananassa
FAN08G3333 Fragaria x ananassa
FAN13G3299 Fragaria x ananassa
FAN18G3205 Fragaria x ananassa
FvH4_5g30861 Fragaria vesca
FvH4_5g38161 Fragaria vesca
Glyma.04G107000 Glycine max
Glyma.05G119400 Glycine max
Glyma.06G106800 Glycine max
Glyma.08G074400 Glycine max
Glyma.13G086000 Glycine max
Glyma.14G167900 Glycine max
Glyma.15G214000 Glycine max
Gohir.A03G049650 Gossypium hirsutum
Gohir.A03G172100 Gossypium hirsutum
Gohir.A05G284200 Gossypium hirsutum
Gohir.A05G284400 Gossypium hirsutum
Gohir.A06G039200 Gossypium hirsutum
Gohir.A12G014000 Gossypium hirsutum
Gohir.A12G014100 Gossypium hirsutum
Gohir.A13G065950 Gossypium hirsutum
Gohir.D02G195400 Gossypium hirsutum
Gohir.D06G040200 Gossypium hirsutum
Gohir.D12G014700 Gossypium hirsutum
Gohir.D13G055400 Gossypium hirsutum
Gorai.005G218400 Gossypium raimondii
Gorai.008G014800 Gossypium raimondii
Gorai.010G044900 Gossypium raimondii
Gorai.013G062800 Gossypium raimondii
GSVIVG01008973001 Vitis vinifera
GSVIVG01029760001 Vitis vinifera
HanXRQChr03g0066981 Helianthus annuus
HanXRQChr06g0184991 Helianthus annuus
HanXRQChr09g0249641 Helianthus annuus
Haze_00559 Corylus avellana
Haze_10632 Corylus avellana
Hma1.2p1_1341F.1_g276890 Hydrangea macrophylla
HPP92_025650 Vanilla planifolia
HPP92_025651 Vanilla planifolia
Hund00416 Selenicereus undatus
Lalb_Chr20g0123121 Lupinus albus
Lalb_Chr23g0270721 Lupinus albus
Lj1g0022845 Lotus japonicus
Lj4E108T0 Lonicera japonica
Lj4g0021379 Lotus japonicus
Lj4P108T30 Lonicera japonica
Lj5P242T16 Lonicera japonica
Lj5P242T17 Lonicera japonica
Lj6g0026516 Lotus japonicus
Lsat_1_v5_gn_3_28260 Lactuca sativa
Lsat_1_v5_gn_9_117460 Lactuca sativa
Manes.02G156800 Manihot esculenta
Manes.06G009500 Manihot esculenta
Manes.14G167600 Manihot esculenta
Mapoly0014s0067 Marchantia polymorpha
MD08G1176400 Malus domestica
MD08G1212800 Malus domestica
MD08G1221400 Malus domestica
MD15G1362200 Malus domestica
MD15G1412100 Malus domestica
Medtr2g008440 Medicago truncatula
Medtr3g073640 Medicago truncatula
MELO3C018662.2 Cucumis melo
Migut.B00631 Erythranthe guttata
Migut.N01004 Erythranthe guttata
MSTRG.16569 Avicennia marina
MSTRG.5260 Avicennia marina
Nitab4.5_0002865g0070 Nicotiana tabacum
Nitab4.5_0005416g0020 Nicotiana tabacum
Nn1g05251 Nelumbo nucifera
Oeu026173.1 Olea europaea
Oeu037188.1 Olea europaea
Os02g0574900 Oryza sativa ssp. japonica
Os10g0363600 Oryza sativa ssp. japonica
Peaxi162Scf00001g00033 Petunia axillaris
PGR042G1694 Punica granatum
PGSC0003DMG400012568 Solanum tuberosum
Phvul.002G207100 Phaseolus vulgaris
Phvul.008G170100 Phaseolus vulgaris
Phvul.009G027300 Phaseolus vulgaris
Potri.002G091900 Populus trichocarpa
Potri.005G170000 Populus trichocarpa
Pp3c10_4990 Physcomitrium patens
Pp3c14_4360 Physcomitrium patens
Prupe.1G510200 Prunus persica
Prupe.1G558500 Prunus persica
Psat1g217920 Pisum sativum
Psat5g136480 Pisum sativum
PSO541G0578 Papaver somniferum
PSO675G4576 Papaver somniferum
QL11p019521 Quercus lobata
QL12p035715 Quercus lobata
RcHm_v2.0_Chr7g0226051 Rosa chinensis
RcHm_v2.0_Chr7g0240161 Rosa chinensis
Rhsim05G0109700 Rhododendron simsii
Rhsim06G0086400 Rhododendron simsii
Rhsim11G0135100 Rhododendron simsii
Rhsim11G0144800 Rhododendron simsii
RhsimUnG0210800 Rhododendron simsii
Sabra05G0127400 Salix brachista
Sc02g0003470 Simmondsia chinensis
Sed0011693 Sechium edule
Sed0018012 Sechium edule
SEGI_33816 Sequoiadendron giganteum
SEGI_36076 Sequoiadendron giganteum
SGA_v2.0_scaffold332G48945 Striga asiatica
SMO347G0283 Selaginella moellendorffii
Solyc01g104980.4 Solanum lycopersicum
Sopen01g047500 Solanum pennellii
Sp1g19550 Schrenkiella parvula
TAR381G0538 Trochodendron aralioides
TAR625G1155 Trochodendron aralioides
THA.LOC104813636 Tarenaya hassleriana
THA.LOC104814857 Tarenaya hassleriana
Thecc.02G142600 Theobroma cacao
Thhalv10007536m.g Eutrema salsugineum
TPR.G10465 Trifolium pratense
TPR.G13602 Trifolium pratense
TPR.G28950 Trifolium pratense
TWI14G0616 Tripterygium wilfordii
TWI56G0863 Tripterygium wilfordii
unitig_8.g3472 Utricularia gibba
VMungo0251G3762 Vigna mungo
VMungo0647G1831 Vigna mungo
VMungo1309G0008 Vigna mungo
Zm00001eb173330 Zea mays
Zm00001eb182900 Zea mays

User provided reference genes

Program Settings