Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p27100 Brassica napus
A09p05230 Brassica napus
Aa31LG11G9050 Aethionema arabicum
Aa31LG2G12110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4623 Anthoceros agrestis
Actinidia19813 Actinidia chinensis
Actinidia28391 Actinidia chinensis
Actinidia30900 Actinidia chinensis
Ah.01g016620 Amaranthus hybridus
Ah.06g190360 Amaranthus hybridus
AL1G65120 Arabidopsis lyrata
AL6G39790 Arabidopsis lyrata
AL7G51030 Arabidopsis lyrata
Aqoxy2G03161 Aquilegia oxysepala
Aqoxy2G03162 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.86SZEE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BBX3WJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HSFD6Z Arachis hypogaea
AT1G54680 Arabidopsis thaliana
AT5G27290 Arabidopsis thaliana
ATR0487G007 Amborella trichopoda
Atru.chr2.536 Acer truncatum
AUR62000902 Chenopodium quinoa
AUR62005073 Chenopodium quinoa
AUR62025002 Chenopodium quinoa
AUR62026190 Chenopodium quinoa
AUR62030520 Chenopodium quinoa
AUR62032573 Chenopodium quinoa
AUR62033882 Chenopodium quinoa
AUR62037588 Chenopodium quinoa
AUR62043825 Chenopodium quinoa
BcaB04g19661 Brassica carinata
BcaB04g19664 Brassica carinata
BcaB04g20139 Brassica carinata
BcaC04g23684 Brassica carinata
BcaC04g23687 Brassica carinata
BcaC05g25942 Brassica carinata
BcaC09g49610 Brassica carinata
BolC1t03421H Brassica oleracea
BolC9t53498H Brassica oleracea
BraA01t02844Z Brassica rapa
BraA09t36162Z Brassica rapa
C01p34500 Brassica napus
C05p18930 Brassica napus
C09p05690 Brassica napus
CAN.G566.56 Capsicum annuum
CAN.G836.16 Capsicum annuum
CANSAT54G0395 Cannabis sativa
CARHR055820 Cardamine hirsuta
CARHR185910 Cardamine hirsuta
Carub.0002s0892 Capsella rubella
Carub.0006s2522 Capsella rubella
Ca_09384_v3 Cicer arietinum L.
CBR_g22370 Chara braunii
CBR_g53664 Chara braunii
Cc02_g32780 Coffea canephora
Cc02_g32790 Coffea canephora
Cc02_g32800 Coffea canephora
CDE05G1895 Ceratophyllum demersum
Cfa006520 Carpinus fangiana
Ciclev10001775m.g Citrus clementina
CiPaw.08G169100 Carya illinoinensis
CiPaw.08G169600 Carya illinoinensis
CiPaw.08G170300 Carya illinoinensis
CiPaw.08G171000 Carya illinoinensis
CiPaw.08G171500 Carya illinoinensis
CiPaw.08G174300 Carya illinoinensis
CiPaw.08G174900 Carya illinoinensis
CiPaw.08G175300 Carya illinoinensis
CiPaw.08G176400 Carya illinoinensis
ClCG03G016590 Citrullus lanatus
ClCG03G016600 Citrullus lanatus
COL.COLO4_13563 Corchorus olitorius
Cpa.g.sc84.115 Carica papaya
Cpa.g.sc84.116 Carica papaya
Cre01.g055412 Chlamydomonas reinhardtii
CsaV3_1G039390 Cucumis sativus L.
CsaV3_1G039400 Cucumis sativus L.
CSS0000473 Camellia sinensis var. sinensis
CSS0010999 Camellia sinensis var. sinensis
DCAR_003305 Daucus carota
DCAR_016974 Daucus carota
Dinv22925 Davidia involucrata
Dinv40231 Davidia involucrata
Duzib106G0722 Durio zibethinus
Duzib128G1838 Durio zibethinus
Duzib177G1144 Durio zibethinus
ECA246G0369 Erigeron canadensis
ECA246G1301 Erigeron canadensis
EL10Ac4g09285 Beta vulgaris
Eucgr.H04431 Eucalyptus grandis
Eucgr.H04432 Eucalyptus grandis
FAN14G3462 Fragaria x ananassa
FAN14G5825 Fragaria x ananassa
FvH4_6g04930 Fragaria vesca
FvH4_6g04940 Fragaria vesca
Glyma.03G241900 Glycine max
Glyma.19G239300 Glycine max
Gohir.A11G260300 Gossypium hirsutum
Gohir.D11G270600 Gossypium hirsutum
Gorai.007G291100 Gossypium raimondii
GSVIVG01022011001 Vitis vinifera
GSVIVG01022012001 Vitis vinifera
HanXRQChr12g0379821 Helianthus annuus
HanXRQChr16g0512311 Helianthus annuus
Haze_04266 Corylus avellana
Hund07025 Selenicereus undatus
Lalb_Chr18g0045341 Lupinus albus
Lj1g0016651 Lotus japonicus
Lj9A677G34 Lonicera japonica
Lj9A677T42 Lonicera japonica
Lsat_1_v5_gn_5_38361 Lactuca sativa
Lsat_1_v5_gn_5_38921 Lactuca sativa
Lsat_1_v5_gn_5_39020 Lactuca sativa
Manes.08G124900 Manihot esculenta
Manes.09G161401 Manihot esculenta
Mapoly0059s0075 Marchantia polymorpha
MBI10_g29587_MAGBIO Magnolia biondii
MBI10_g37183_MAGBIO Magnolia biondii
MCO11G582 Micromonas commoda
MD04G1212700 Malus domestica
Medtr7g114070 Medicago truncatula
MELO3C015365.2 Cucumis melo
MELO3C029313.2 Cucumis melo
MELO3C029314.2 Cucumis melo
Migut.L01511 Erythranthe guttata
Migut.L01512 Erythranthe guttata
MSTRG.10545 Avicennia marina
MSTRG.10546 Avicennia marina
Nitab4.5_0000027g0510 Nicotiana tabacum
Nitab4.5_0000327g0090 Nicotiana tabacum
Nitab4.5_0006272g0050 Nicotiana tabacum
Nitab4.5_0008257g0040 Nicotiana tabacum
Nn3g21221 Nelumbo nucifera
Nn3g21224 Nelumbo nucifera
Oeu025239.1 Olea europaea
Oeu033946.2 Olea europaea
Os01g0382700 Oryza sativa ssp. japonica
Peaxi162Scf00071g00838 Petunia axillaris
Peaxi162Scf00338g00312 Petunia axillaris
PGR031G0264 Punica granatum
PGR031G3379 Punica granatum
PGSC0003DMG400010083 Solanum tuberosum
Phvul.006G095900 Phaseolus vulgaris
Potri.013G029000 Populus trichocarpa
Pp3c5_10750 Physcomitrium patens
PRCOL_00003025 Prasinoderma coloniale
Prupe.6G333000 Prunus persica
Psat3g009280 Pisum sativum
PSO170G0105 Papaver somniferum
PSO170G0922 Papaver somniferum
PSO170G3637 Papaver somniferum
PSO302G0180 Papaver somniferum
PSO302G0249 Papaver somniferum
PSO302G0281 Papaver somniferum
QL03p002916 Quercus lobata
QL03p003527 Quercus lobata
RcHm_v2.0_Chr3g0453431 Rosa chinensis
Rhsim05G0146400 Rhododendron simsii
Rhsim07G0178200 Rhododendron simsii
Sabra13G0029300 Salix brachista
SalBow1G3301 Salvia bowleyana
SalBow1G7230 Salvia bowleyana
Sc06g0003450 Simmondsia chinensis
Sed0008957 Sechium edule
Sed0017789 Sechium edule
SEGI_02572 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09406 Striga asiatica
SGA_v2.0_scaffold21G09407 Striga asiatica
SMO367G0890 Selaginella moellendorffii
Solyc02g090020.4 Solanum lycopersicum
Solyc08g042140.3 Solanum lycopersicum
Sopen02g034720 Solanum pennellii
Sopen08g012740 Solanum pennellii
Sopen08g012750 Solanum pennellii
Sp2g20530 Schrenkiella parvula
SpUn0002_0170 Schrenkiella parvula
TAR362G0113 Trochodendron aralioides
TAR365G0081 Trochodendron aralioides
THA.LOC104802813 Tarenaya hassleriana
THA.LOC104805845 Tarenaya hassleriana
Thecc.05G296900 Theobroma cacao
Thecc.05G297200 Theobroma cacao
Thhalv10004533m.g Eutrema salsugineum
Thhalv10023619m.g Eutrema salsugineum
TPR.G21793 Trifolium pratense
TWI56G1348 Tripterygium wilfordii
unitig_578.g16416 Utricularia gibba
vmacro05046 Vaccinium macrocarpon
vmacro19654 Vaccinium macrocarpon
VMungo0540G1876 Vigna mungo
Zm00001eb131930 Zea mays

User provided reference genes

Program Settings