Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07380 Brassica napus
A03p60310 Brassica napus
A08p19080 Brassica napus
Aa31LG2G19610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4294 Anthoceros agrestis
Actinidia20936 Actinidia chinensis
Actinidia24368 Actinidia chinensis
Actinidia24369 Actinidia chinensis
Ah.09g228690 Amaranthus hybridus
Ah.14g084380 Amaranthus hybridus
AL7G21340 Arabidopsis lyrata
Aqoxy7G03346 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.752C0V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IP23DV Arachis hypogaea
AT4G30790 Arabidopsis thaliana
ATR0749G018 Amborella trichopoda
Atru.chr7.14 Acer truncatum
AUR62025371 Chenopodium quinoa
AUR62028380 Chenopodium quinoa
BcaC01g00592 Brassica carinata
BcaC01g00593 Brassica carinata
BcaC01g00594 Brassica carinata
BcaC01g01128 Brassica carinata
BcaC01g01140 Brassica carinata
BcaC02g10746 Brassica carinata
BcaC09g51868 Brassica carinata
BcaNung01560 Brassica carinata
BcaNung02741 Brassica carinata
BcaNung04829 Brassica carinata
BolC1t00801H Brassica oleracea
BolC3t21162H Brassica oleracea
BolC4t24063H Brassica oleracea
BolC4t24064H Brassica oleracea
BolC7t46280H Brassica oleracea
BraA01t00687Z Brassica rapa
BraA03t15073Z Brassica rapa
BraA08t33870Z Brassica rapa
C01p08140 Brassica napus
C03p39520 Brassica napus
C03p39530 Brassica napus
C03p88520 Brassica napus
C04p25450 Brassica napus
C04p25460 Brassica napus
C07p58220 Brassica napus
CAN.G1190.4 Capsicum annuum
CANSAT11G0384 Cannabis sativa
CANSAT54G0977 Cannabis sativa
CARHR238630 Cardamine hirsuta
Carub.0007s0981 Capsella rubella
Ca_21152_v3 Cicer arietinum L.
CBR_g38482 Chara braunii
CBR_g55388 Chara braunii
Cc06_g14510 Coffea canephora
CDE02G1528 Ceratophyllum demersum
CDE05G3326 Ceratophyllum demersum
Cfa020786 Carpinus fangiana
Cfa026066 Carpinus fangiana
Ciclev10007284m.g Citrus clementina
CiPaw.15G164500 Carya illinoinensis
CiPaw.16G106900 Carya illinoinensis
ClCG02G014310 Citrullus lanatus
COL.COLO4_05032 Corchorus olitorius
COL.COLO4_05033 Corchorus olitorius
Cpa.g.sc199.20 Carica papaya
Cre16.g651350 Chlamydomonas reinhardtii
CsaV3_2G007690 Cucumis sativus L.
CSS0046771 Camellia sinensis var. sinensis
DCAR_009892 Daucus carota
DCAR_020090 Daucus carota
Dinv41343 Davidia involucrata
Dinv42820 Davidia involucrata
Dinv43280 Davidia involucrata
Duzib150G1559 Durio zibethinus
Duzib168G0378 Durio zibethinus
Duzib187G1514 Durio zibethinus
ECA234G2881 Erigeron canadensis
ECA236G1776 Erigeron canadensis
EL10Ac8g18909 Beta vulgaris
Eucgr.C00241 Eucalyptus grandis
Eucgr.G01056 Eucalyptus grandis
FAN07G0247 Fragaria x ananassa
FAN12G2950 Fragaria x ananassa
FAN12G4167 Fragaria x ananassa
FAN17G2275 Fragaria x ananassa
FAN22G1868 Fragaria x ananassa
FvH4_4g10150 Fragaria vesca
Glyma.02G206500 Glycine max
Glyma.17G071400 Glycine max
Gohir.A05G008100 Gossypium hirsutum
Gohir.D05G008900 Gossypium hirsutum
Gorai.009G009100 Gossypium raimondii
GSVIVG01023678001 Vitis vinifera
GSVIVG01023682001 Vitis vinifera
HanXRQChr05g0141571 Helianthus annuus
HanXRQChr10g0307611 Helianthus annuus
HanXRQChr12g0357781 Helianthus annuus
Haze_19142 Corylus avellana
Hma1.2p1_0222F.1_g093876 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093890 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093900 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093910 Hydrangea macrophylla
Hma1.2p1_1084F.1_g255280 Hydrangea macrophylla
HPP92_021904 Vanilla planifolia
Hund08956 Selenicereus undatus
Lalb_Chr12g0198821 Lupinus albus
Lalb_Chr13g0300691 Lupinus albus
Lj4g0007617 Lotus japonicus
Lj9A721G57 Lonicera japonica
Lsat_1_v5_gn_4_130961 Lactuca sativa
Lsat_1_v5_gn_5_89080 Lactuca sativa
Lsat_1_v5_gn_8_64740 Lactuca sativa
Manes.06G031700 Manihot esculenta
Manes.14G113300 Manihot esculenta
Mapoly0041s0089 Marchantia polymorpha
MBI14_g08698_MAGBIO Magnolia biondii
MBI14_g31376_MAGBIO Magnolia biondii
MCO10G226 Micromonas commoda
MD04G1049500 Malus domestica
MD13G1257100 Malus domestica
Medtr4g130370 Medicago truncatula
MELO3C004116.2 Cucumis melo
Migut.J01389 Erythranthe guttata
Migut.K00302 Erythranthe guttata
MSTRG.19664 Avicennia marina
Nitab4.5_0001036g0120 Nicotiana tabacum
Nitab4.5_0006744g0010 Nicotiana tabacum
Nn1g06333 Nelumbo nucifera
Nn2g14025 Nelumbo nucifera
Nn2g14361 Nelumbo nucifera
Nn8g40053 Nelumbo nucifera
Oeu024893.2 Olea europaea
Os02g0179800 Oryza sativa ssp. japonica
Peaxi162Scf00563g00417 Petunia axillaris
PGR102G2861 Punica granatum
PGR114G0002 Punica granatum
PGR142G1236 Punica granatum
PGSC0003DMG400011153 Solanum tuberosum
Phvul.003G153800 Phaseolus vulgaris
Potri.006G180800 Populus trichocarpa
Potri.018G103000 Populus trichocarpa
Pp3c19_12090 Physcomitrium patens
Pp3c22_15890 Physcomitrium patens
PRCOL_00000855 Prasinoderma coloniale
Prupe.1G102400 Prunus persica
Psat7g006640 Pisum sativum
PSO063G7271 Papaver somniferum
PSO782G3416 Papaver somniferum
QL02p094176 Quercus lobata
RcHm_v2.0_Chr4g0405611 Rosa chinensis
RcHm_v2.0_Chr5g0033091 Rosa chinensis
Rhsim01G0023800 Rhododendron simsii
Rhsim03G0259200 Rhododendron simsii
Sabra06G0137800 Salix brachista
Sabra18G0088600 Salix brachista
SalBow1G1777 Salvia bowleyana
SalBow1G5562 Salvia bowleyana
Sc14g0000980 Simmondsia chinensis
Sed0017470 Sechium edule
Sed0019076 Sechium edule
SEGI_20080 Sequoiadendron giganteum
SEGI_31223 Sequoiadendron giganteum
SGA_v2.0_scaffold265G46080 Striga asiatica
SGA_v2.0_scaffold45G17008 Striga asiatica
SMO301G0012 Selaginella moellendorffii
SMO361G0185 Selaginella moellendorffii
SMO361G0456 Selaginella moellendorffii
Solyc07g005970.3 Solanum lycopersicum
Sopen07g002100 Solanum pennellii
Sp7g28660 Schrenkiella parvula
TAR625G0571 Trochodendron aralioides
TAR636G2626 Trochodendron aralioides
THA.LOC104803549 Tarenaya hassleriana
THA.LOC104803909 Tarenaya hassleriana
THA.LOC104815517 Tarenaya hassleriana
Thecc.09G153600 Theobroma cacao
Thhalv10024256m.g Eutrema salsugineum
TPR.G131 Trifolium pratense
TPR.G24844 Trifolium pratense
TWI32G0440 Tripterygium wilfordii
TWI34G0709 Tripterygium wilfordii
unitig_37.g12751 Utricularia gibba
vmacro06053 Vaccinium macrocarpon
vmacro06070 Vaccinium macrocarpon
vmacro13051 Vaccinium macrocarpon
VMungo1127G1083 Vigna mungo
VMungo1215G0464 Vigna mungo
Zm00001eb110220 Zea mays
Zm00001eb206680 Zea mays
Zm00001eb233940 Zea mays
Zm00001eb234440 Zea mays
Zm00001eb257740 Zea mays
Zm00001eb400070 Zea mays

User provided reference genes

Program Settings