Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p35820 Brassica napus
A05p20850 Brassica napus
A06p04140 Brassica napus
Aa31LG10G5030 Aethionema arabicum
Actinidia01133 Actinidia chinensis
Actinidia01137 Actinidia chinensis
Actinidia03448 Actinidia chinensis
Actinidia03449 Actinidia chinensis
Actinidia03451 Actinidia chinensis
Actinidia06643 Actinidia chinensis
Actinidia20097 Actinidia chinensis
Actinidia29515 Actinidia chinensis
Actinidia36911 Actinidia chinensis
Ah.03g146750 Amaranthus hybridus
AL1G55670 Arabidopsis lyrata
AL3G31950 Arabidopsis lyrata
Aqoxy5G02196 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A43QXH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J2NKIW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N565XM Arachis hypogaea
AT2G10553 Arabidopsis thaliana
AT3G18640 Arabidopsis thaliana
ATR0697G125 Amborella trichopoda
ATR1136G179 Amborella trichopoda
Atru.chr4.835 Acer truncatum
Atru.chr4.836 Acer truncatum
AUR62003603 Chenopodium quinoa
AUR62017914 Chenopodium quinoa
BcaB04g20760 Brassica carinata
BcaB07g33709 Brassica carinata
BcaC05g27548 Brassica carinata
BcaC08g43085 Brassica carinata
BcaC09g48821 Brassica carinata
BolC1t04521H Brassica oleracea
BolC6t35483H Brassica oleracea
BraA01t03661Z Brassica rapa
BraA06t23620Z Brassica rapa
C01p45600 Brassica napus
C05p35340 Brassica napus
C06p03450 Brassica napus
CAN.G1012.11 Capsicum annuum
CAN.G744.17 Capsicum annuum
CANSAT01G1165 Cannabis sativa
CARHR038870 Cardamine hirsuta
CARHR094020 Cardamine hirsuta
Carub.0001s3802 Capsella rubella
Carub.0003s1842 Capsella rubella
Ca_16932_v3 Cicer arietinum L.
Ca_17647_v3 Cicer arietinum L.
Cc00_g20050 Coffea canephora
CDE01G0259 Ceratophyllum demersum
CDE02G0685 Ceratophyllum demersum
CDE08G1567 Ceratophyllum demersum
Cfa002823 Carpinus fangiana
CiPaw.03G128800 Carya illinoinensis
ClCG01G015510 Citrullus lanatus
COL.COLO4_14021 Corchorus olitorius
Cpa.g.sc42.122 Carica papaya
CsaV3_6G041740 Cucumis sativus L.
CSS0006899 Camellia sinensis var. sinensis
CSS0011515 Camellia sinensis var. sinensis
DCAR_000420 Daucus carota
DCAR_010881 Daucus carota
DCAR_031318 Daucus carota
Dinv20513 Davidia involucrata
Dinv20529 Davidia involucrata
Dinv24328 Davidia involucrata
Dinv24732 Davidia involucrata
Dinv25812 Davidia involucrata
Duzib147G0862 Durio zibethinus
Duzib160G0654 Durio zibethinus
Duzib187G0404 Durio zibethinus
ECA232G2971 Erigeron canadensis
ECA236G3691 Erigeron canadensis
ECA246G4840 Erigeron canadensis
EL10Ac6g15275 Beta vulgaris
Eucgr.I00225 Eucalyptus grandis
FAN19G1884 Fragaria x ananassa
FAN23G1052 Fragaria x ananassa
FAN26G1648 Fragaria x ananassa
FAN28G2033 Fragaria x ananassa
FvH4_1g24100 Fragaria vesca
Glyma.04G214200 Glycine max
Glyma.05G190500 Glycine max
Glyma.06G152200 Glycine max
Gohir.A03G087300 Gossypium hirsutum
Gohir.A11G227302 Gossypium hirsutum
Gohir.A11G227304 Gossypium hirsutum
Gohir.D02G108001 Gossypium hirsutum
Gohir.D11G229640 Gossypium hirsutum
Gorai.003G068000 Gossypium raimondii
Gorai.005G122500 Gossypium raimondii
GSVIVG01010035001 Vitis vinifera
HanXRQChr04g0123801 Helianthus annuus
HanXRQChr08g0232591 Helianthus annuus
HanXRQChr15g0483421 Helianthus annuus
HanXRQChr15g0484651 Helianthus annuus
Haze_25122 Corylus avellana
HPP92_012422 Vanilla planifolia
HPP92_013320 Vanilla planifolia
Hund04477 Selenicereus undatus
Lalb_Chr07g0184471 Lupinus albus
Lalb_Chr08g0238451 Lupinus albus
Lalb_Chr11g0068351 Lupinus albus
Lalb_Chr23g0272561 Lupinus albus
Lj1g0022982 Lotus japonicus
Lj2A603T36 Lonicera japonica
Lj4A691T76 Lonicera japonica
Lj4g0000833 Lotus japonicus
Lsat_1_v5_gn_1_124320 Lactuca sativa
Lsat_1_v5_gn_6_96540 Lactuca sativa
Manes.12G153500 Manihot esculenta
Mapoly0005s0067 Marchantia polymorpha
MBI03_g11313_MAGBIO Magnolia biondii
MBI06_g18871_MAGBIO Magnolia biondii
MD01G1013400 Malus domestica
MD15G1337600 Malus domestica
Medtr3g095960 Medicago truncatula
Medtr8g093480 Medicago truncatula
MELO3C008046.2 Cucumis melo
Migut.C01037 Erythranthe guttata
Migut.M01119 Erythranthe guttata
Migut.N03235 Erythranthe guttata
MSTRG.1373 Avicennia marina
MSTRG.7348 Avicennia marina
Nitab4.5_0000299g0110 Nicotiana tabacum
Nitab4.5_0005978g0020 Nicotiana tabacum
Nn5g28628 Nelumbo nucifera
Oeu000781.1 Olea europaea
Oeu007015.1 Olea europaea
Oeu012145.5 Olea europaea
Oeu064794.1 Olea europaea
Os05g0497500 Oryza sativa ssp. japonica
Os08g0135800 Oryza sativa ssp. japonica
Peaxi162Scf00263g00317 Petunia axillaris
PGR102G0661 Punica granatum
PGSC0003DMG400002280 Solanum tuberosum
PGSC0003DMG400022809 Solanum tuberosum
PGSC0003DMG400024801 Solanum tuberosum
PGSC0003DMG400045292 Solanum tuberosum
Phvul.009G149100 Phaseolus vulgaris
Potri.005G061100 Populus trichocarpa
Potri.007G107800 Populus trichocarpa
Prupe.6G159100 Prunus persica
Psat5g059960 Pisum sativum
PSO063G0467 Papaver somniferum
PSO782G0500 Papaver somniferum
QL06p029317 Quercus lobata
RcHm_v2.0_Chr2g0120281 Rosa chinensis
Rhsim10G0136500 Rhododendron simsii
Rhsim10G0136700 Rhododendron simsii
Rhsim10G0146200 Rhododendron simsii
Sabra05G0051500 Salix brachista
Sabra07G0088300 Salix brachista
SalBow6G6261 Salvia bowleyana
Sc07g0001690 Simmondsia chinensis
Sc16g0003920 Simmondsia chinensis
Sed0009753 Sechium edule
Sed0024902 Sechium edule
SGA_v2.0_scaffold19G08644 Striga asiatica
SGA_v2.0_scaffold22G09681 Striga asiatica
SGA_v2.0_scaffold25G11160 Striga asiatica
Solyc04g064770.1 Solanum lycopersicum
Solyc04g064800.4 Solanum lycopersicum
Solyc12g040240.1 Solanum lycopersicum
Solyc12g040250.1 Solanum lycopersicum
Sopen04g026740 Solanum pennellii
Sopen04g026760 Solanum pennellii
Sopen10g004880 Solanum pennellii
Sp1g35790 Schrenkiella parvula
Sp3g16710 Schrenkiella parvula
TAR376G0938 Trochodendron aralioides
TAR625G0023 Trochodendron aralioides
TAR628G1562 Trochodendron aralioides
THA.LOC104821178 Tarenaya hassleriana
Thecc.01G127600 Theobroma cacao
Thhalv10020512m.g Eutrema salsugineum
TPR.G31 Trifolium pratense
TPR.G34650 Trifolium pratense
TPR.G37341 Trifolium pratense
TWI31G0955 Tripterygium wilfordii
TWI75G1801 Tripterygium wilfordii
unitig_27.g24970 Utricularia gibba
unitig_52.g17537 Utricularia gibba
unitig_62.g23526 Utricularia gibba
unitig_62.g23527 Utricularia gibba
vmacro12862 Vaccinium macrocarpon
VMungo0251G0832 Vigna mungo
VMungo0647G1249 Vigna mungo
VMungo1309G1084 Vigna mungo
Zm00001eb291750 Zea mays
Zm00001eb417000 Zea mays

User provided reference genes

Program Settings