Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p24580 Brassica napus
A03p31140 Brassica napus
A05p17320 Brassica napus
A06p00030 Brassica napus
A08p00310 Brassica napus
A09p01710 Brassica napus
Aa31LG10G420 Aethionema arabicum
Aa31LG5G1910 Aethionema arabicum
Actinidia19773 Actinidia chinensis
Actinidia21437 Actinidia chinensis
Ah.15g093050 Amaranthus hybridus
AL1G63880 Arabidopsis lyrata
AL6G50890 Arabidopsis lyrata
Aqoxy2G02898 Aquilegia oxysepala
Aqoxy5G00783 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GMFP2F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HDU51Y Arachis hypogaea
AT1G55770 Arabidopsis thaliana
AT4G02250 Arabidopsis thaliana
ATR1149G037 Amborella trichopoda
ATR1153G038 Amborella trichopoda
Atru.chr5.1112 Acer truncatum
AUR62008689 Chenopodium quinoa
AUR62025555 Chenopodium quinoa
BcaB01g02062 Brassica carinata
BcaB01g02439 Brassica carinata
BcaB02g10800 Brassica carinata
BcaB05g23608 Brassica carinata
BcaB07g33190 Brassica carinata
BcaC01g06767 Brassica carinata
BcaC03g16110 Brassica carinata
BcaC04g24050 Brassica carinata
BcaC08g44217 Brassica carinata
BolC2t09897H Brassica oleracea
BolC3t16082H Brassica oleracea
BolC3t21618H Brassica oleracea
BolC6t36819H Brassica oleracea
BolC9t53113H Brassica oleracea
BraA02t07448Z Brassica rapa
BraA03t12291Z Brassica rapa
BraA05t20629Z Brassica rapa
BraA06t23219Z Brassica rapa
BraA08t32089Z Brassica rapa
BraA09t35826Z Brassica rapa
C02p38810 Brassica napus
C03p37950 Brassica napus
C03p93200 Brassica napus
C06p16220 Brassica napus
C09p01780 Brassica napus
CANSAT25G0193 Cannabis sativa
CANSAT25G1336 Cannabis sativa
CANSAT54G0162 Cannabis sativa
CANSAT54G1773 Cannabis sativa
CARHR045450 Cardamine hirsuta
CARHR250460 Cardamine hirsuta
Carub.0001s4433 Capsella rubella
Carub.0006s3492 Capsella rubella
Ca_09185_v3 Cicer arietinum L.
Ca_20910_v3 Cicer arietinum L.
Cfa005888 Carpinus fangiana
Cfa005889 Carpinus fangiana
Cfa006646 Carpinus fangiana
Cfa006647 Carpinus fangiana
Cfa006651 Carpinus fangiana
Cfa006653 Carpinus fangiana
Cfa014665 Carpinus fangiana
Cfa014668 Carpinus fangiana
Ciclev10002648m.g Citrus clementina
Ciclev10023798m.g Citrus clementina
CiPaw.07G023500 Carya illinoinensis
CiPaw.07G023600 Carya illinoinensis
CiPaw.08G093400 Carya illinoinensis
ClCG03G017200 Citrullus lanatus
ClCG10G011070 Citrullus lanatus
COL.COLO4_23319 Corchorus olitorius
Cpa.g.sc151.17 Carica papaya
Cpa.g.sc48.109 Carica papaya
CsaV3_1G038650 Cucumis sativus L.
CsaV3_4G000950 Cucumis sativus L.
CSS0025537 Camellia sinensis var. sinensis
CSS0043898 Camellia sinensis var. sinensis
CSS0044540 Camellia sinensis var. sinensis
CSS0050483 Camellia sinensis var. sinensis
DCAR_002850 Daucus carota
DCAR_005787 Daucus carota
Dinv19674 Davidia involucrata
Dinv33067 Davidia involucrata
Dinv40359 Davidia involucrata
Dinv40360 Davidia involucrata
Duzib133G0465 Durio zibethinus
Duzib138G0838 Durio zibethinus
ECA248G1001 Erigeron canadensis
EL10Ac7g17542 Beta vulgaris
EL10Ac7g18175 Beta vulgaris
EL10Ac7g18176 Beta vulgaris
Eucgr.K03504 Eucalyptus grandis
FAN15G3222 Fragaria x ananassa
FAN20G1394 Fragaria x ananassa
FAN24G2751 Fragaria x ananassa
FAN27G3015 Fragaria x ananassa
FvH4_2g25950 Fragaria vesca
Glyma.02G016700 Glycine max
Glyma.03G215700 Glycine max
Glyma.10G017300 Glycine max
Glyma.19G212200 Glycine max
Gohir.A08G042100 Gossypium hirsutum
Gohir.A12G129100 Gossypium hirsutum
Gohir.D08G051900 Gossypium hirsutum
Gohir.D12G132900 Gossypium hirsutum
Gorai.004G052000 Gossypium raimondii
Gorai.008G143900 Gossypium raimondii
Haze_04963 Corylus avellana
Haze_04964 Corylus avellana
HPP92_002230 Vanilla planifolia
Lalb_Chr02g0146451 Lupinus albus
Lalb_Chr04g0259851 Lupinus albus
Lalb_Chr06g0166521 Lupinus albus
Lalb_Chr15g0078461 Lupinus albus
Lj1g0023613 Lotus japonicus
Lj2A1197T77 Lonicera japonica
Lj4g0022993 Lotus japonicus
Lj5g0004990 Lotus japonicus
Lsat_1_v5_gn_6_4280 Lactuca sativa
Manes.09G173500 Manihot esculenta
MBI18_g25093_MAGBIO Magnolia biondii
MBI19_g44106_MAGBIO Magnolia biondii
MD03G1290800 Malus domestica
MD11G1307600 Malus domestica
Medtr4g071020 Medicago truncatula
Medtr7g108865 Medicago truncatula
MELO3C015291.2 Cucumis melo
MELO3C017944.2 Cucumis melo
Nn3g21538 Nelumbo nucifera
Nn4g25762 Nelumbo nucifera
Os01g0311700 Oryza sativa ssp. japonica
Os05g0360900 Oryza sativa ssp. japonica
PGR119G1148 Punica granatum
Phvul.001G208600 Phaseolus vulgaris
Phvul.001G208700 Phaseolus vulgaris
Phvul.001G208800 Phaseolus vulgaris
Phvul.001G208900 Phaseolus vulgaris
Phvul.001G209000 Phaseolus vulgaris
Phvul.007G246800 Phaseolus vulgaris
Phvul.009G236000 Phaseolus vulgaris
Potri.001G127500 Populus trichocarpa
Potri.004G016500 Populus trichocarpa
Psat0s1683g0040 Pisum sativum
Psat7g183080 Pisum sativum
PSO210G6958 Papaver somniferum
PSO832G2602 Papaver somniferum
QL03p019019 Quercus lobata
QL03p019550 Quercus lobata
QL03p019557 Quercus lobata
QL03p019662 Quercus lobata
QL03p019667 Quercus lobata
QL08p042930 Quercus lobata
QL12p028082 Quercus lobata
RcHm_v2.0_Chr6g0294271 Rosa chinensis
Rhsim05G0131000 Rhododendron simsii
Rhsim05G0137100 Rhododendron simsii
Rhsim13G0008900 Rhododendron simsii
Sabra01G0098200 Salix brachista
Sabra11G0000800 Salix brachista
Sc25g0000800 Simmondsia chinensis
Sed0000124 Sechium edule
Sed0018956 Sechium edule
Sed0024461 Sechium edule
Sed0028173 Sechium edule
SHI15103 Sapria himalayana
Sp1g41350 Schrenkiella parvula
Sp6g02140 Schrenkiella parvula
TAR216G0004 Trochodendron aralioides
TAR362G0992 Trochodendron aralioides
THA.LOC104801288 Tarenaya hassleriana
THA.LOC104822713 Tarenaya hassleriana
THA.LOC104825958 Tarenaya hassleriana
Thecc.01G303600 Theobroma cacao
Thhalv10012280m.g Eutrema salsugineum
Thhalv10029000m.g Eutrema salsugineum
TPR.G9645 Trifolium pratense
TWI12G1373 Tripterygium wilfordii
TWI14G0192 Tripterygium wilfordii
TWI23G0284 Tripterygium wilfordii
TWI59G1361 Tripterygium wilfordii
TWI60G0816 Tripterygium wilfordii
VMungo0331G0621 Vigna mungo
VMungo0720G1834 Vigna mungo
VMungo1309G0611 Vigna mungo
VMungo1309G2342 Vigna mungo
VMungo1383G0005 Vigna mungo
VMungo1383G2652 Vigna mungo
Zm00001eb340180 Zea mays

User provided reference genes

Program Settings