Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p08830 Brassica napus
A08p32590 Brassica napus
A09p63580 Brassica napus
Aa31LG1G1920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2553 Anthoceros agrestis
Actinidia08900 Actinidia chinensis
Actinidia18318 Actinidia chinensis
Actinidia25536 Actinidia chinensis
Actinidia36835 Actinidia chinensis
Ah.07g207280 Amaranthus hybridus
Ah.13g068520 Amaranthus hybridus
AL1G24480 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.HQ0MCX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N4MBCZ Arachis hypogaea
AT1G12840 Arabidopsis thaliana
ATR0582G027 Amborella trichopoda
Atru.chr6.2636 Acer truncatum
AUR62015995 Chenopodium quinoa
AUR62021202 Chenopodium quinoa
BcaB01g02330 Brassica carinata
BcaB03g13163 Brassica carinata
BcaB08g34247 Brassica carinata
BcaC02g12651 Brassica carinata
BcaC03g17683 Brassica carinata
BcaC05g25110 Brassica carinata
BcaC05g25150 Brassica carinata
BcaC07g40270 Brassica carinata
BcaC07g41676 Brassica carinata
BolC5t29790H Brassica oleracea
BolC8t49197H Brassica oleracea
BolC8t50972H Brassica oleracea
BolC8t52247H Brassica oleracea
BraA06t24078Z Brassica rapa
BraA08t35183Z Brassica rapa
BraA09t41708Z Brassica rapa
C02p56920 Brassica napus
C05p10440 Brassica napus
C08p15700 Brassica napus
C08p33730 Brassica napus
C08p47080 Brassica napus
CAN.G257.127 Capsicum annuum
CAN.G637.54 Capsicum annuum
CANSAT64G0789 Cannabis sativa
CARHR013160 Cardamine hirsuta
Carub.0001s1258 Capsella rubella
Ca_08125_v3 Cicer arietinum L.
CBR_g724 Chara braunii
Cc05_g01690 Coffea canephora
CDE05G1333 Ceratophyllum demersum
CDE05G2896 Ceratophyllum demersum
Cfa007176 Carpinus fangiana
Cfa026601 Carpinus fangiana
Ciclev10015638m.g Citrus clementina
CiPaw.04G001900 Carya illinoinensis
ClCG01G008140 Citrullus lanatus
COL.COLO4_10540 Corchorus olitorius
COL.COLO4_13344 Corchorus olitorius
Cpa.g.sc70.83 Carica papaya
Cre06.g250250 Chlamydomonas reinhardtii
CsaV3_5G020170 Cucumis sativus L.
CSS0013918 Camellia sinensis var. sinensis
CSS0036109 Camellia sinensis var. sinensis
CSS0044185 Camellia sinensis var. sinensis
DCAR_016355 Daucus carota
DCAR_021412 Daucus carota
Dinv11219 Davidia involucrata
Dinv23202 Davidia involucrata
Duzib114G0355 Durio zibethinus
Duzib147G0304 Durio zibethinus
Duzib187G1504 Durio zibethinus
Duzib264G0281 Durio zibethinus
ECA232G4336 Erigeron canadensis
ECA246G0182 Erigeron canadensis
EL10Ac3g05664 Beta vulgaris
Eucgr.G01943 Eucalyptus grandis
Eucgr.G01948 Eucalyptus grandis
Eucgr.G01949 Eucalyptus grandis
FAN02G1454 Fragaria x ananassa
FAN05G2121 Fragaria x ananassa
FAN09G3010 Fragaria x ananassa
FAN09G3428 Fragaria x ananassa
FAN14G0379 Fragaria x ananassa
FvH4_6g54180 Fragaria vesca
Glyma.01G064050 Glycine max
Glyma.02G065500 Glycine max
Glyma.16G050200 Glycine max
Glyma.16G146600 Glycine max
Glyma.19G101000 Glycine max
Gohir.A05G334700 Gossypium hirsutum
Gohir.A11G063400 Gossypium hirsutum
Gohir.D04G073600 Gossypium hirsutum
Gohir.D11G067700 Gossypium hirsutum
Gorai.007G072500 Gossypium raimondii
Gorai.012G082900 Gossypium raimondii
GSVIVG01008626001 Vitis vinifera
GSVIVG01033006001 Vitis vinifera
HanXRQChr09g0273581 Helianthus annuus
HanXRQChr16g0528421 Helianthus annuus
Haze_14935 Corylus avellana
Haze_27306 Corylus avellana
Hma1.2p1_0403F.1_g145240 Hydrangea macrophylla
Hma1.2p1_1187F.1_g265130 Hydrangea macrophylla
Hma1.2p1_1187F.1_g265140 Hydrangea macrophylla
HPP92_022913 Vanilla planifolia
Hund04735 Selenicereus undatus
Hund11754 Selenicereus undatus
Lalb_Chr14g0363981 Lupinus albus
Lalb_Chr24g0403201 Lupinus albus
Lj1g0000762 Lotus japonicus
Lj5A90G23 Lonicera japonica
Lj9A484G61 Lonicera japonica
Lsat_1_v5_gn_4_84120 Lactuca sativa
Lsat_1_v5_gn_4_84140 Lactuca sativa
Lsat_1_v5_gn_5_10760 Lactuca sativa
Lsat_1_v5_gn_6_50360 Lactuca sativa
Manes.04G091900 Manihot esculenta
Manes.11G078200 Manihot esculenta
Mapoly0126s0013 Marchantia polymorpha
MBI07_g36274_MAGBIO Magnolia biondii
MBI07_g40357_MAGBIO Magnolia biondii
MBI11_g08158_MAGBIO Magnolia biondii
MCO15G152 Micromonas commoda
MD09G1004500 Malus domestica
MD17G1008500 Malus domestica
Medtr7g083720 Medicago truncatula
MELO3C025061.2 Cucumis melo
Migut.D01225 Erythranthe guttata
MSTRG.11256 Avicennia marina
MSTRG.22881 Avicennia marina
Nitab4.5_0005207g0030 Nicotiana tabacum
Nitab4.5_0005207g0040 Nicotiana tabacum
Nitab4.5_0007858g0030 Nicotiana tabacum
Nn3g16313 Nelumbo nucifera
Nn4g22182 Nelumbo nucifera
Nn5g27103 Nelumbo nucifera
Oeu042080.1 Olea europaea
Oeu058117.1 Olea europaea
Oeu058121.1 Olea europaea
Os05g0593100 Oryza sativa ssp. japonica
Peaxi162Scf00171g01130 Petunia axillaris
PGR083G2609 Punica granatum
Phvul.001G086700 Phaseolus vulgaris
Phvul.004G070900 Phaseolus vulgaris
Potri.001G322500 Populus trichocarpa
Potri.017G061100 Populus trichocarpa
Pp3c13_14220 Physcomitrium patens
Pp3c3_17610 Physcomitrium patens
Pp3c9_8980 Physcomitrium patens
PRCOL_00003348 Prasinoderma coloniale
Prupe.3G312200 Prunus persica
Psat0s1497g0040 Pisum sativum
PSO478G0165 Papaver somniferum
QL02p062748 Quercus lobata
QL02p069938 Quercus lobata
RcHm_v2.0_Chr2g0176361 Rosa chinensis
RcHm_v2.0_Chr5g0048981 Rosa chinensis
Rhsim08G0195300 Rhododendron simsii
Sabra16G0204700 Salix brachista
Sabra17G0054300 Salix brachista
SalBow1G4818 Salvia bowleyana
Sc13g0008590 Simmondsia chinensis
Sc25g0000460 Simmondsia chinensis
Sed0000891 Sechium edule
Sed0008328 Sechium edule
SEGI_35214 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07035 Striga asiatica
SMO200G0006 Selaginella moellendorffii
Solyc03g097800.4 Solanum lycopersicum
Sopen03g028540 Solanum pennellii
Sp1g11410 Schrenkiella parvula
TAR374G1733 Trochodendron aralioides
TAR622G0101 Trochodendron aralioides
TAR629G2425 Trochodendron aralioides
THA.LOC104805306 Tarenaya hassleriana
THA.LOC104805959 Tarenaya hassleriana
THA.LOC104823995 Tarenaya hassleriana
THA.LOC104825653 Tarenaya hassleriana
Thecc.04G045300 Theobroma cacao
Thhalv10007948m.g Eutrema salsugineum
TPR.G17457 Trifolium pratense
TWI34G1938 Tripterygium wilfordii
TWI60G1549 Tripterygium wilfordii
unitig_61.g26203 Utricularia gibba
vmacro19161 Vaccinium macrocarpon
VMungo0251G2278 Vigna mungo
VMungo0331G0161 Vigna mungo
VMungo0464G0001 Vigna mungo
VMungo0464G1180 Vigna mungo
VMungo1383G1114 Vigna mungo
Zm00001eb163710 Zea mays
Zm00001eb297260 Zea mays
Zm00001eb345260 Zea mays

User provided reference genes

Program Settings