Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p19540 Brassica napus
A06p09090 Brassica napus
A06p15100 Brassica napus
A06p26960 Brassica napus
A07p29260 Brassica napus
A08p30110 Brassica napus
A09p59630 Brassica napus
Aa31LG4G4940 Aethionema arabicum
Aa31LG7G3710 Aethionema arabicum
Aa31LG7G6930 Aethionema arabicum
Aa31LG9G8980 Aethionema arabicum
Actinidia19057 Actinidia chinensis
Ah.08g217620 Amaranthus hybridus
AL1G31410 Arabidopsis lyrata
AL2G34600 Arabidopsis lyrata
Aqoxy3G03280 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9TI54L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3VYYS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PUHY82 Arachis hypogaea
AT1G18870 Arabidopsis thaliana
AT1G74710 Arabidopsis thaliana
ATR1120G170 Amborella trichopoda
Atru.chr9.2308 Acer truncatum
AUR62014518 Chenopodium quinoa
AUR62038016 Chenopodium quinoa
BcaB01g02747 Brassica carinata
BcaB02g06963 Brassica carinata
BcaB02g09857 Brassica carinata
BcaB02g10729 Brassica carinata
BcaB03g12949 Brassica carinata
BcaB05g23017 Brassica carinata
BcaB05g24627 Brassica carinata
BcaB05g24870 Brassica carinata
BcaB06g27446 Brassica carinata
BcaB07g31908 Brassica carinata
BcaB08g35674 Brassica carinata
BcaC01g02167 Brassica carinata
BcaC01g03013 Brassica carinata
BcaC03g15524 Brassica carinata
BcaC05g25790 Brassica carinata
BcaC06g34281 Brassica carinata
BcaC06g35156 Brassica carinata
BcaC06g35640 Brassica carinata
BcaC07g38956 Brassica carinata
BcaC07g41285 Brassica carinata
BcaC08g43294 Brassica carinata
BcaC08g43295 Brassica carinata
BcaC08g46896 Brassica carinata
BcaC08g46898 Brassica carinata
BcaC08g46921 Brassica carinata
BcaNung05961 Brassica carinata
BolC2t09243H Brassica oleracea
BolC3t19019H Brassica oleracea
BolC5t30429H Brassica oleracea
BolC5t31102H Brassica oleracea
BolC6t38431H Brassica oleracea
BolC6t39911H Brassica oleracea
BolC7t41751H Brassica oleracea
BolC7t41754H Brassica oleracea
BolC7t42440H Brassica oleracea
BolC8t48344H Brassica oleracea
BolC8t49526H Brassica oleracea
BolC8t51848H Brassica oleracea
BraA02t06991Z Brassica rapa
BraA02t07733Z Brassica rapa
BraA06t24624Z Brassica rapa
BraA07t30565Z Brassica rapa
BraA07t31582Z Brassica rapa
BraA08t34946Z Brassica rapa
C02p32080 Brassica napus
C03p57060 Brassica napus
C03p57070 Brassica napus
C05p17290 Brassica napus
C06p06430 Brassica napus
C06p12020 Brassica napus
C06p33160 Brassica napus
C06p48750 Brassica napus
C07p12650 Brassica napus
C07p19270 Brassica napus
C08p19030 Brassica napus
C08p42930 Brassica napus
CAN.G628.39 Capsicum annuum
CARHR019520 Cardamine hirsuta
CARHR035090 Cardamine hirsuta
CARHR068010 Cardamine hirsuta
CARHR115670 Cardamine hirsuta
Carub.0001s1852 Capsella rubella
Carub.0002s2150 Capsella rubella
CBR_g47969 Chara braunii
CBR_g48051 Chara braunii
Cc04_g15460 Coffea canephora
CDE06G2389 Ceratophyllum demersum
Cfa018984 Carpinus fangiana
Ciclev10024236m.g Citrus clementina
CiPaw.11G039100 Carya illinoinensis
CiPaw.12G016200 Carya illinoinensis
ClCG06G016360 Citrullus lanatus
COL.COLO4_05912 Corchorus olitorius
COL.COLO4_05913 Corchorus olitorius
Cpa.g.sc17.207 Carica papaya
CsaV3_1G002150 Cucumis sativus L.
CSS0033583 Camellia sinensis var. sinensis
DCAR_032137 Daucus carota
Dinv19921 Davidia involucrata
Dinv38670 Davidia involucrata
Duzib084G0749 Durio zibethinus
ECA247G0496 Erigeron canadensis
EL10Ac1g00671 Beta vulgaris
Eucgr.B00433 Eucalyptus grandis
FAN04G2395 Fragaria x ananassa
FAN18G1891 Fragaria x ananassa
FvH4_5g15420 Fragaria vesca
Glyma.01G104100 Glycine max
Glyma.03G070600 Glycine max
Gohir.A04G049100 Gossypium hirsutum
Gohir.A12G175340 Gossypium hirsutum
Gohir.D05G331200 Gossypium hirsutum
Gohir.D12G178408 Gossypium hirsutum
Gorai.008G190900 Gossypium raimondii
Gorai.009G355100 Gossypium raimondii
GSVIVG01008052001 Vitis vinifera
HanXRQChr01g0006271 Helianthus annuus
HanXRQChr14g0461161 Helianthus annuus
Haze_07373 Corylus avellana
HPP92_007666 Vanilla planifolia
HPP92_007667 Vanilla planifolia
Hund26920 Selenicereus undatus
Lalb_Chr07g0192981 Lupinus albus
Lj3g0022540 Lotus japonicus
Lj9A460T56 Lonicera japonica
Lsat_1_v5_gn_3_22001 Lactuca sativa
Manes.14G075200 Manihot esculenta
MBI11_g14660_MAGBIO Magnolia biondii
MD06G1188700 Malus domestica
MD14G1195300 Malus domestica
MD14G1195400 Malus domestica
MD14G1195500 Malus domestica
Medtr4g076520 Medicago truncatula
Medtr7g011400 Medicago truncatula
MELO3C017156.2 Cucumis melo
MELO3C029757.2 Cucumis melo
Migut.I00129 Erythranthe guttata
Migut.I00130 Erythranthe guttata
MSTRG.11397 Avicennia marina
MSTRG.23042 Avicennia marina
Nitab4.5_0000269g0200 Nicotiana tabacum
Nitab4.5_0009895g0030 Nicotiana tabacum
Nn3g17139 Nelumbo nucifera
Oeu006476.1 Olea europaea
Oeu048740.1 Olea europaea
Os09g0361500 Oryza sativa ssp. japonica
Peaxi162Scf00013g00033 Petunia axillaris
PGSC0003DMG400033038 Solanum tuberosum
Phvul.010G011700 Phaseolus vulgaris
Potri.012G070000 Populus trichocarpa
Prupe.5G187000 Prunus persica
Psat7g237240 Pisum sativum
QL10p015682 Quercus lobata
RcHm_v2.0_Chr7g0180661 Rosa chinensis
Rhsim08G0159300 Rhododendron simsii
Sabra12G0049900 Salix brachista
SalBow5G1335 Salvia bowleyana
Sc23g0004450 Simmondsia chinensis
Sc23g0004630 Simmondsia chinensis
Sc23g0004640 Simmondsia chinensis
Sc23g0004760 Simmondsia chinensis
Sed0007559 Sechium edule
SEGI_02517 Sequoiadendron giganteum
SEGI_10147 Sequoiadendron giganteum
SEGI_27806 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10906 Striga asiatica
SMO270G0001 Selaginella moellendorffii
Solyc06g071030.3 Solanum lycopersicum
Sopen06g027330 Solanum pennellii
Sp1g16850 Schrenkiella parvula
Sp5g29830 Schrenkiella parvula
TAR622G0030 Trochodendron aralioides
TAR622G0338 Trochodendron aralioides
TAR622G0519 Trochodendron aralioides
THA.LOC104812556 Tarenaya hassleriana
THA.LOC104813869 Tarenaya hassleriana
Thecc.03G080100 Theobroma cacao
Thhalv10007243m.g Eutrema salsugineum
Thhalv10018346m.g Eutrema salsugineum
TPR.G10903 Trifolium pratense
TPR.G24814 Trifolium pratense
TPR.G5572 Trifolium pratense
TPR.G5641 Trifolium pratense
unitig_750.g28498 Utricularia gibba
vmacro17511 Vaccinium macrocarpon
VMungo0331G1422 Vigna mungo
Zm00001eb310840 Zea mays

User provided reference genes

Program Settings