Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p22140 Brassica napus
A09p63240 Brassica napus
Aa31LG1G1640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis
Actinidia01370 Actinidia chinensis
Actinidia08115 Actinidia chinensis
Actinidia08116 Actinidia chinensis
AL1G24840 Arabidopsis lyrata
AL7G20520 Arabidopsis lyrata
Aqoxy3G00657 Aquilegia oxysepala
Aqoxy3G01365 Aquilegia oxysepala
Aqoxy6G03052 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea
AT1G13160 Arabidopsis thaliana
AT4G31520 Arabidopsis thaliana
ATR0824G018 Amborella trichopoda
ATR0824G183 Amborella trichopoda
Atru.chr11.1973 Acer truncatum
Atru.chr11.1974 Acer truncatum
AUR62002805 Chenopodium quinoa
AUR62014112 Chenopodium quinoa
AUR62015661 Chenopodium quinoa
AUR62020542 Chenopodium quinoa
BcaB04g19498 Brassica carinata
BcaB06g26385 Brassica carinata
BcaB07g32274 Brassica carinata
BcaB07g33803 Brassica carinata
BcaB08g34419 Brassica carinata
BolC8t52212H Brassica oleracea
BraA09t41676Z Brassica rapa
C08p46730 Brassica napus
CAN.G484.3 Capsicum annuum
CANSAT01G3182 Cannabis sativa
CARHR013530 Cardamine hirsuta
CARHR068650 Cardamine hirsuta
Carub.0001s1289 Capsella rubella
Carub.0003s0103 Capsella rubella
Ca_25128_v3 Cicer arietinum L.
CBR_g23824 Chara braunii
Cc11_g16150 Coffea canephora
CDE02G2789 Ceratophyllum demersum
Cfa009260 Carpinus fangiana
Cfa023305 Carpinus fangiana
Ciclev10030726m.g Citrus clementina
CiPaw.06G064600 Carya illinoinensis
ClCG03G002050 Citrullus lanatus
COL.COLO4_23531 Corchorus olitorius
Cpa.g.sc33.80 Carica papaya
Cre06.g277050 Chlamydomonas reinhardtii
CsaV3_1G012700 Cucumis sativus L.
CSS0025446 Camellia sinensis var. sinensis
DCAR_007035 Daucus carota
Dinv14754 Davidia involucrata
Duzib268G0822 Durio zibethinus
ECA240G1955 Erigeron canadensis
EL10Ac6g14297 Beta vulgaris
Eucgr.H02450 Eucalyptus grandis
FAN07G2018 Fragaria x ananassa
FAN12G2593 Fragaria x ananassa
FAN17G0358 Fragaria x ananassa
FAN22G1040 Fragaria x ananassa
FvH4_4g25230 Fragaria vesca
Glyma.11G244500 Glycine max
Gohir.A12G268000 Gossypium hirsutum
Gohir.D12G268400 Gossypium hirsutum
Gorai.008G288600 Gossypium raimondii
GSVIVG01000585001 Vitis vinifera
HanXRQChr08g0208471 Helianthus annuus
Haze_12293 Corylus avellana
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla
HPP92_006499 Vanilla planifolia
HPP92_006537 Vanilla planifolia
HPP92_006538 Vanilla planifolia
HPP92_006539 Vanilla planifolia
HPP92_006540 Vanilla planifolia
HPP92_006543 Vanilla planifolia
HPP92_006544 Vanilla planifolia
HPP92_006552 Vanilla planifolia
HPP92_006568 Vanilla planifolia
HPP92_006576 Vanilla planifolia
HPP92_006854 Vanilla planifolia
HPP92_006855 Vanilla planifolia
HPP92_006872 Vanilla planifolia
HPP92_011125 Vanilla planifolia
HPP92_026597 Vanilla planifolia
HPP92_026598 Vanilla planifolia
HPP92_026825 Vanilla planifolia
HPP92_026938 Vanilla planifolia
HPP92_027078 Vanilla planifolia
HPP92_027083 Vanilla planifolia
HPP92_027084 Vanilla planifolia
HPP92_027088 Vanilla planifolia
HPP92_027089 Vanilla planifolia
HPP92_027648 Vanilla planifolia
HPP92_027649 Vanilla planifolia
HPP92_027652 Vanilla planifolia
HPP92_027653 Vanilla planifolia
HPP92_027994 Vanilla planifolia
HPP92_028011 Vanilla planifolia
HPP92_028370 Vanilla planifolia
HPP92_028371 Vanilla planifolia
HPP92_028374 Vanilla planifolia
HPP92_028489 Vanilla planifolia
HPP92_028492 Vanilla planifolia
HPP92_028506 Vanilla planifolia
HPP92_028511 Vanilla planifolia
HPP92_028550 Vanilla planifolia
HPP92_028576 Vanilla planifolia
Hund25033 Selenicereus undatus
Lalb_Chr05g0228661 Lupinus albus
Lalb_Chr17g0336921 Lupinus albus
Lalb_Chr23g0277731 Lupinus albus
Lj1g0001310 Lotus japonicus
Lj6A816T56 Lonicera japonica
Lj6C816T3 Lonicera japonica
LjContig00312_ERROPOS870357g0004032 Lotus japonicus
Lsat_1_v5_gn_1_12340 Lactuca sativa
Lsat_1_v5_gn_8_153700 Lactuca sativa
Lsat_1_v5_gn_8_153780 Lactuca sativa
Manes.12G019500 Manihot esculenta
Mapoly0084s0017 Marchantia polymorpha
MCO05G293 Micromonas commoda
MD16G1105900 Malus domestica
Medtr3g086350 Medicago truncatula
Medtr4g005970 Medicago truncatula
Medtr4g006000 Medicago truncatula
MELO3C022674.2 Cucumis melo
MELO3C026845.2 Cucumis melo
Migut.C01140 Erythranthe guttata
Migut.K00634 Erythranthe guttata
MSTRG.7955 Avicennia marina
Nitab4.5_0001290g0150 Nicotiana tabacum
Nitab4.5_0004725g0020 Nicotiana tabacum
Nn4g22519 Nelumbo nucifera
Oeu014152.4 Olea europaea
Oeu028968.1 Olea europaea
Os04g0630000 Oryza sativa ssp. japonica
Peaxi162Scf00062g00716 Petunia axillaris
PGR119G0237 Punica granatum
PGSC0003DMG400004723 Solanum tuberosum
Phvul.001G256500 Phaseolus vulgaris
Potri.008G182900 Populus trichocarpa
Pp3c21_560 Physcomitrium patens
Pp3c21_561 Physcomitrium patens
PRCOL_00005223 Prasinoderma coloniale
Prupe.1G240500 Prunus persica
Psat2g160640 Pisum sativum
PSO017G3678 Papaver somniferum
PSO017G4772 Papaver somniferum
PSO063G2135 Papaver somniferum
PSO478G3924 Papaver somniferum
QL04p087069 Quercus lobata
QL05p021165 Quercus lobata
RcHm_v2.0_Chr4g0432421 Rosa chinensis
Rhsim12G0038300 Rhododendron simsii
Sabra08G0139300 Salix brachista
SalBow2G2049 Salvia bowleyana
SalBow5G3177 Salvia bowleyana
SalBow5G3625 Salvia bowleyana
Sc04g0005970 Simmondsia chinensis
Sc04g0005980 Simmondsia chinensis
Sed0014055 Sechium edule
Sed0023493 Sechium edule
SEGI_37161 Sequoiadendron giganteum
SGA_v2.0_scaffold92G28200 Striga asiatica
SHI17843 Sapria himalayana
SMO197G0095 Selaginella moellendorffii
Solyc12g099890.2 Solanum lycopersicum
Sopen12g034510 Solanum pennellii
Sp1g11680 Schrenkiella parvula
TAR374G0468 Trochodendron aralioides
TAR374G0642 Trochodendron aralioides
THA.LOC104809236 Tarenaya hassleriana
Thecc.02G267000 Theobroma cacao
Thhalv10005577m.g Eutrema salsugineum
Thhalv10006828m.g Eutrema salsugineum
TPR.G18550 Trifolium pratense
TPR.G5678 Trifolium pratense
TWI34G1512 Tripterygium wilfordii
TWI36G0896 Tripterygium wilfordii
TWI75G1217 Tripterygium wilfordii
unitig_22.g6420 Utricularia gibba
unitig_22.g6421 Utricularia gibba
vmacro01109 Vaccinium macrocarpon
VMungo0540G0742 Vigna mungo
Zm00001eb069620 Zea mays
Zm00001eb279220 Zea mays

User provided reference genes

Program Settings