Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p06030 Brassica napus
A09p35170 Brassica napus
Aa31LG11G7760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1602 Anthoceros agrestis
Actinidia06226 Actinidia chinensis
Actinidia06972 Actinidia chinensis
Actinidia10150 Actinidia chinensis
Actinidia24461 Actinidia chinensis
Ah.10g030140 Amaranthus hybridus
AL6G24150 Arabidopsis lyrata
Aqoxy1G00373 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2K1FXD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8B1C3X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LJ5CCV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S4G3U6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SS96TB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VF4M4N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZL62QC Arachis hypogaea
AT5G13530 Arabidopsis thaliana
ATR0719G001 Amborella trichopoda
ATR0721G162 Amborella trichopoda
ATR0782G088 Amborella trichopoda
ATR0782G192 Amborella trichopoda
Atru.chr12.1265 Acer truncatum
Atru.chr12.1267 Acer truncatum
AUR62026885 Chenopodium quinoa
AUR62032634 Chenopodium quinoa
AUR62044058 Chenopodium quinoa
BcaB01g02474 Brassica carinata
BcaB01g03097 Brassica carinata
BcaB01g05352 Brassica carinata
BolC2t06568H Brassica oleracea
BolC2t06569H Brassica oleracea
BolC2t06570H Brassica oleracea
BolC3t13205H Brassica oleracea
BolC4t25700H Brassica oleracea
BolC9t58620H Brassica oleracea
BraA03t09941Z Brassica rapa
BraA09t39045Z Brassica rapa
C03p07080 Brassica napus
C04p41180 Brassica napus
CAN.G1045.18 Capsicum annuum
CANSAT56G1944 Cannabis sativa
CARHR199910 Cardamine hirsuta
Carub.0006s1169 Capsella rubella
Ca_12963_v3 Cicer arietinum L.
CBR_g16035 Chara braunii
CBR_g21745 Chara braunii
CBR_g22349 Chara braunii
CBR_g22350 Chara braunii
CBR_g22351 Chara braunii
CBR_g26207 Chara braunii
Cc00_g09560 Coffea canephora
CDE02G1072 Ceratophyllum demersum
CDE02G3571 Ceratophyllum demersum
CDE09G0620 Ceratophyllum demersum
CDE09G1076 Ceratophyllum demersum
Cfa009883 Carpinus fangiana
Cfa010939 Carpinus fangiana
Cfa025818 Carpinus fangiana
Ciclev10000023m.g Citrus clementina
CiPaw.14G008600 Carya illinoinensis
CiPaw.14G112000 Carya illinoinensis
ClCG02G022810 Citrullus lanatus
COL.COLO4_20694 Corchorus olitorius
COL.COLO4_20695 Corchorus olitorius
Cpa.g.sc169.50 Carica papaya
Cpa.g.sc169.51 Carica papaya
Cpa.g.sc847.2 Carica papaya
Cre14.g614850 Chlamydomonas reinhardtii
CsaV3_5G036850 Cucumis sativus L.
CsaV3_6G038940 Cucumis sativus L.
CSS0018240 Camellia sinensis var. sinensis
CSS0021926 Camellia sinensis var. sinensis
CSS0027876 Camellia sinensis var. sinensis
DCAR_001913 Daucus carota
Dinv32016 Davidia involucrata
Dinv44694 Davidia involucrata
Duzib106G1351 Durio zibethinus
Duzib114G0877 Durio zibethinus
ECA236G1978 Erigeron canadensis
EL10Ac2g02773 Beta vulgaris
Eucgr.G03219 Eucalyptus grandis
FAN01G2608 Fragaria x ananassa
FAN03G0411 Fragaria x ananassa
FAN06G0346 Fragaria x ananassa
FAN10G1007 Fragaria x ananassa
FAN16G3237 Fragaria x ananassa
FvH4_7g03470 Fragaria vesca
Glyma.04G134700 Glycine max
Glyma.11G157400 Glycine max
Glyma.13G195200 Glycine max
Glyma.15G232901 Glycine max
Glyma.15G233001 Glycine max
Glyma.15G233534 Glycine max
Glyma.15G233567 Glycine max
Glyma.15G233600 Glycine max
Gohir.A05G399700 Gossypium hirsutum
Gohir.A10G186900 Gossypium hirsutum
Gohir.D04G016100 Gossypium hirsutum
Gohir.D10G193900 Gossypium hirsutum
Gorai.011G216900 Gossypium raimondii
Gorai.012G018700 Gossypium raimondii
GSVIVG01036651001 Vitis vinifera
HanXRQChr04g0112901 Helianthus annuus
HanXRQChr11g0340551 Helianthus annuus
HanXRQChr12g0374571 Helianthus annuus
HanXRQChr15g0473251 Helianthus annuus
HanXRQChr15g0481011 Helianthus annuus
HanXRQChr15g0481021 Helianthus annuus
HanXRQChr15g0481041 Helianthus annuus
HanXRQChr15g0481051 Helianthus annuus
HanXRQChr17g0566401 Helianthus annuus
Haze_03007 Corylus avellana
Haze_23247 Corylus avellana
HPP92_001023 Vanilla planifolia
HPP92_003596 Vanilla planifolia
Hund13381 Selenicereus undatus
Lalb_Chr01g0015821 Lupinus albus
Lalb_Chr04g0264171 Lupinus albus
Lj3g0007376 Lotus japonicus
Lj9A657G27 Lonicera japonica
Lj9C657G2 Lonicera japonica
Lj9C657T7 Lonicera japonica
Lsat_1_v5_gn_0_12381 Lactuca sativa
Lsat_1_v5_gn_4_19980 Lactuca sativa
Lsat_1_v5_gn_7_31581 Lactuca sativa
Lsat_1_v5_gn_7_86600 Lactuca sativa
Manes.04G157700 Manihot esculenta
Mapoly0002s0111 Marchantia polymorpha
MD02G1282000 Malus domestica
MD02G1282100 Malus domestica
MD07G1048200 Malus domestica
Medtr0137s0080 Medicago truncatula
Medtr3g014090 Medicago truncatula
MELO3C012481.2 Cucumis melo
MELO3C014558.2 Cucumis melo
Migut.N01852 Erythranthe guttata
MSTRG.28033 Avicennia marina
MSTRG.5071 Avicennia marina
Nitab4.5_0003481g0090 Nicotiana tabacum
Nitab4.5_0005808g0030 Nicotiana tabacum
Nn7g36747 Nelumbo nucifera
Oeu013090.1 Olea europaea
Os05g0392000 Oryza sativa ssp. japonica
Os05g0392050 Oryza sativa ssp. japonica
Peaxi162Scf00082g00122 Petunia axillaris
PGR031G1017 Punica granatum
Phvul.005G025000 Phaseolus vulgaris
Potri.001G029600 Populus trichocarpa
Potri.001G274900 Populus trichocarpa
Prupe.2G040800 Prunus persica
Psat5g221640 Pisum sativum
PSO339G1124 Papaver somniferum
PSO384G0047 Papaver somniferum
QL01p016949 Quercus lobata
QL04p017759 Quercus lobata
RcHm_v2.0_Chr1g0325801 Rosa chinensis
Rhsim07G0068000 Rhododendron simsii
Rhsim13G0208400 Rhododendron simsii
Sabra01G0021200 Salix brachista
Sabra16G0169200 Salix brachista
Sabra16G0169400 Salix brachista
Sc10g0004490 Simmondsia chinensis
Sed0009251 Sechium edule
Sed0016122 Sechium edule
SEGI_17265 Sequoiadendron giganteum
SGA_v2.0_scaffold232G43498 Striga asiatica
SHI04010 Sapria himalayana
SHI04011 Sapria himalayana
SHI04014 Sapria himalayana
SHI04015 Sapria himalayana
SMO271G0056 Selaginella moellendorffii
SMO271G0120 Selaginella moellendorffii
SMO308G0074 Selaginella moellendorffii
Solyc01g096490.3 Solanum lycopersicum
Sopen01g040220 Solanum pennellii
Sp6g30490 Schrenkiella parvula
TAR369G1080 Trochodendron aralioides
TAR623G1672 Trochodendron aralioides
THA.LOC104819140 Tarenaya hassleriana
Thecc.10G149700 Theobroma cacao
Thhalv10012422m.g Eutrema salsugineum
TPR.G1404 Trifolium pratense
TWI15G0170 Tripterygium wilfordii
TWI38G1858 Tripterygium wilfordii
unitig_0.g2291 Utricularia gibba
vmacro04042 Vaccinium macrocarpon
vmacro13761 Vaccinium macrocarpon
VMungo0464G0053 Vigna mungo
VMungo1080G0047 Vigna mungo
Zm00001eb287260 Zea mays
Zm00001eb350870 Zea mays

User provided reference genes

Program Settings