Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p14120 Brassica napus
A09p14950 Brassica napus
Aa31LG2G1190 Aethionema arabicum
Actinidia08610 Actinidia chinensis
Actinidia34177 Actinidia chinensis
Ah.13g069690 Amaranthus hybridus
AL2G10890 Arabidopsis lyrata
Aqoxy5G04044 Aquilegia oxysepala
Aqoxy7G00221 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.36D870 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.59PT6M Arachis hypogaea
AT1G64140 Arabidopsis thaliana
ATR1131G034 Amborella trichopoda
Atru.chr9.2080 Acer truncatum
AUR62010777 Chenopodium quinoa
AUR62019776 Chenopodium quinoa
AUR62021071 Chenopodium quinoa
AUR62031460 Chenopodium quinoa
BcaB07g31439 Brassica carinata
BcaB07g31525 Brassica carinata
BcaC04g22534 Brassica carinata
BcaC04g22535 Brassica carinata
BcaC04g22655 Brassica carinata
BolC9t54599H Brassica oleracea
BolC9t54704H Brassica oleracea
BraA09t37059Z Brassica rapa
BraA09t37140Z Brassica rapa
C09p17010 Brassica napus
C09p18070 Brassica napus
CAN.G532.68 Capsicum annuum
CANSAT21G0595 Cannabis sativa
CARHR046800 Cardamine hirsuta
Carub.0002s0067 Capsella rubella
Ca_10964_v3 Cicer arietinum L.
Cc02_g02080 Coffea canephora
Cc08_g15520 Coffea canephora
CDE02G2034 Ceratophyllum demersum
CDE04G3080 Ceratophyllum demersum
CDE10G0521 Ceratophyllum demersum
CDE10G0791 Ceratophyllum demersum
CDE10G0979 Ceratophyllum demersum
Cfa012267 Carpinus fangiana
Ciclev10019140m.g Citrus clementina
CiPaw.11G126900 Carya illinoinensis
CiPaw.12G087100 Carya illinoinensis
ClCG01G002150 Citrullus lanatus
COL.COLO4_08334 Corchorus olitorius
Cpa.g.sc321.2 Carica papaya
CsaV3_5G002270 Cucumis sativus L.
CSS0019271 Camellia sinensis var. sinensis
CSS0034195 Camellia sinensis var. sinensis
CSS0041240 Camellia sinensis var. sinensis
CSS0042414 Camellia sinensis var. sinensis
CSS0049608 Camellia sinensis var. sinensis
DCAR_006852 Daucus carota
DCAR_008526 Daucus carota
DCAR_020295 Daucus carota
Dinv28355 Davidia involucrata
Dinv35294 Davidia involucrata
Dinv37570 Davidia involucrata
Dinv38885 Davidia involucrata
Duzib068G0600 Durio zibethinus
Duzib084G0464 Durio zibethinus
Duzib205G0585 Durio zibethinus
ECA232G3387 Erigeron canadensis
ECA233G1322 Erigeron canadensis
ECA246G0635 Erigeron canadensis
EL10Ac3g05370 Beta vulgaris
EL10Ac5g12854 Beta vulgaris
Eucgr.D01792 Eucalyptus grandis
Eucgr.E00807 Eucalyptus grandis
FAN04G1462 Fragaria x ananassa
FAN04G2241 Fragaria x ananassa
FAN08G0634 Fragaria x ananassa
FAN13G0102 Fragaria x ananassa
FAN13G1218 Fragaria x ananassa
FAN18G1037 Fragaria x ananassa
FvH4_5g03650 Fragaria vesca
Glyma.01G223400 Glycine max
Glyma.05G213300 Glycine max
Glyma.08G019800 Glycine max
Gohir.A02G103700 Gossypium hirsutum
Gohir.A09G191100 Gossypium hirsutum
Gohir.D03G080200 Gossypium hirsutum
Gohir.D03G080300 Gossypium hirsutum
Gohir.D09G185600 Gossypium hirsutum
Gorai.003G083700 Gossypium raimondii
Gorai.006G208300 Gossypium raimondii
GSVIVG01003094001 Vitis vinifera
GSVIVG01019448001 Vitis vinifera
GSVIVG01028755001 Vitis vinifera
HanXRQChr06g0166281 Helianthus annuus
HanXRQChr09g0253141 Helianthus annuus
HanXRQChr15g0493381 Helianthus annuus
HanXRQChr17g0533931 Helianthus annuus
Haze_08718 Corylus avellana
Hma1.2p1_0142F.1_g064160 Hydrangea macrophylla
Hma1.2p1_0216F.1_g091270 Hydrangea macrophylla
HPP92_006483 Vanilla planifolia
HPP92_023971 Vanilla planifolia
Lalb_Chr16g0390341 Lupinus albus
Lj1P1010T36 Lonicera japonica
Lj2P175T19 Lonicera japonica
Lj4g0009292 Lotus japonicus
Lj8P215T13 Lonicera japonica
Lsat_1_v5_gn_9_57161 Lactuca sativa
Manes.02G014900 Manihot esculenta
MBI06_g29318_MAGBIO Magnolia biondii
MBI07_g06320_MAGBIO Magnolia biondii
MBI07_g38645_MAGBIO Magnolia biondii
MD06G1096100 Malus domestica
MD14G1116300 Malus domestica
Medtr8g099105 Medicago truncatula
MELO3C005727.2 Cucumis melo
Migut.A00697 Erythranthe guttata
Migut.F01061 Erythranthe guttata
MSTRG.11944 Avicennia marina
MSTRG.25643 Avicennia marina
Nitab4.5_0001748g0030 Nicotiana tabacum
Nitab4.5_0002944g0150 Nicotiana tabacum
Nitab4.5_0005339g0010 Nicotiana tabacum
Nn1g01756 Nelumbo nucifera
Oeu003337.1 Olea europaea
Oeu009280.1 Olea europaea
Oeu042369.1 Olea europaea
Oeu042375.2 Olea europaea
Oeu050927.1 Olea europaea
Oeu050928.1 Olea europaea
Oeu059583.1 Olea europaea
Oeu063042.1 Olea europaea
Os01g0621900 Oryza sativa ssp. japonica
Os02g0259100 Oryza sativa ssp. japonica
Os06g0523100 Oryza sativa ssp. japonica
Peaxi162Scf00074g00156 Petunia axillaris
Peaxi162Scf00102g01614 Petunia axillaris
PGR031G0552 Punica granatum
PGR042G3215 Punica granatum
PGSC0003DMG400005830 Solanum tuberosum
PGSC0003DMG400012172 Solanum tuberosum
PGSC0003DMG400028194 Solanum tuberosum
Phvul.002G161400 Phaseolus vulgaris
Phvul.002G294600 Phaseolus vulgaris
Potri.001G097200 Populus trichocarpa
Potri.003G134200 Populus trichocarpa
Prupe.5G110700 Prunus persica
Psat7g029120 Pisum sativum
PSO063G3847 Papaver somniferum
PSO135G0411 Papaver somniferum
PSO170G6721 Papaver somniferum
PSO384G2366 Papaver somniferum
QL02p032544 Quercus lobata
RcHm_v2.0_Chr7g0196081 Rosa chinensis
RcHm_v2.0_Chr7g0196091 Rosa chinensis
Rhsim02G0237200 Rhododendron simsii
Rhsim02G0237300 Rhododendron simsii
Rhsim03G0196900 Rhododendron simsii
Sabra01G0072500 Salix brachista
Sabra03G0096600 Salix brachista
SalBow1G6595 Salvia bowleyana
SalBow1G7748 Salvia bowleyana
SalBow2G1186 Salvia bowleyana
Sc01g0009980 Simmondsia chinensis
Sc13g0009440 Simmondsia chinensis
Sed0003878 Sechium edule
Sed0010954 Sechium edule
SEGI_28658 Sequoiadendron giganteum
SGA_v2.0_scaffold192G40598 Striga asiatica
SGA_v2.0_scaffold96G28999 Striga asiatica
SHI07056 Sapria himalayana
Solyc08g008180.3 Solanum lycopersicum
Solyc08g081760.3 Solanum lycopersicum
Sopen08g004030 Solanum pennellii
Sopen08g030060 Solanum pennellii
Sp2g00590 Schrenkiella parvula
TAR629G2865 Trochodendron aralioides
TAR636G0920 Trochodendron aralioides
THA.LOC104809354 Tarenaya hassleriana
Thecc.03G289200 Theobroma cacao
Thhalv10023333m.g Eutrema salsugineum
TWI15G1126 Tripterygium wilfordii
TWI60G0243 Tripterygium wilfordii
TWI81G0889 Tripterygium wilfordii
unitig_32.g11608 Utricularia gibba
unitig_46.g18812 Utricularia gibba
unitig_748.g7420 Utricularia gibba
vmacro06591 Vaccinium macrocarpon
vmacro11418 Vaccinium macrocarpon
VMungo0251G1700 Vigna mungo
VMungo1215G2254 Vigna mungo
Zm00001eb159560 Zea mays
Zm00001eb204020 Zea mays
Zm00001eb238000 Zea mays
Zm00001eb344910 Zea mays

User provided reference genes

Program Settings