Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p09030 Brassica napus
A09p15710 Brassica napus
Aa31LG2G540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4088 Anthoceros agrestis
Actinidia02041 Actinidia chinensis
Actinidia05228 Actinidia chinensis
Actinidia14524 Actinidia chinensis
Actinidia27409 Actinidia chinensis
Ah.07g208970 Amaranthus hybridus
Ah.13g068290 Amaranthus hybridus
AL1G23990 Arabidopsis lyrata
AL1G24100 Arabidopsis lyrata
AL2G12540 Arabidopsis lyrata
Aqoxy7G00440 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BX3ZCH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CHY9ZA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HG54ZH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LLQV15 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M5YJKY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q80APQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3YVB2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z37SN9 Arachis hypogaea
AT1G12640 Arabidopsis thaliana
AT1G63050 Arabidopsis thaliana
ATR0757G074 Amborella trichopoda
Atru.chr9.1544 Acer truncatum
AUR62016028 Chenopodium quinoa
AUR62021233 Chenopodium quinoa
BcaB07g31380 Brassica carinata
BcaC02g10256 Brassica carinata
BcaC04g22467 Brassica carinata
BcaC05g25124 Brassica carinata
BcaC05g25169 Brassica carinata
BolC3t17616H Brassica oleracea
BolC5t29805H Brassica oleracea
BolC7t42983H Brassica oleracea
BolC9t54799H Brassica oleracea
BraA06t24092Z Brassica rapa
BraA09t37214Z Brassica rapa
C03p53560 Brassica napus
C04p31030 Brassica napus
C05p10630 Brassica napus
C09p18950 Brassica napus
C09p18960 Brassica napus
CAN.G26.30 Capsicum annuum
CAN.G902.1 Capsicum annuum
CAN.G981.33 Capsicum annuum
CANSAT54G2270 Cannabis sativa
CARHR012930 Cardamine hirsuta
CARHR048570 Cardamine hirsuta
Carub.0001s1233 Capsella rubella
Carub.0002s0195 Capsella rubella
Ca_20247_v3 Cicer arietinum L.
CBR_g78882 Chara braunii
Cc08_g14010 Coffea canephora
CDE11G0458 Ceratophyllum demersum
Cfa012105 Carpinus fangiana
Cfa024599 Carpinus fangiana
Ciclev10020062m.g Citrus clementina
CiPaw.11G141000 Carya illinoinensis
CiPaw.12G098000 Carya illinoinensis
ClCG00G000880 Citrullus lanatus
ClCG00G003630 Citrullus lanatus
ClCG10G003720 Citrullus lanatus
ClCG10G003730 Citrullus lanatus
COL.COLO4_31135 Corchorus olitorius
Cpa.g.sc29.5 Carica papaya
Cpa.g.sc29.7 Carica papaya
Cre12.g537641 Chlamydomonas reinhardtii
CsaV3_3G003720 Cucumis sativus L.
CSS0039885 Camellia sinensis var. sinensis
DCAR_004677 Daucus carota
DCAR_008422 Daucus carota
DCAR_024220 Daucus carota
Dinv37691 Davidia involucrata
Dinv39008 Davidia involucrata
Duzib160G0138 Durio zibethinus
Duzib160G0880 Durio zibethinus
Duzib192G0273 Durio zibethinus
ECA233G1009 Erigeron canadensis
ECA246G0929 Erigeron canadensis
EL10Ac3g05697 Beta vulgaris
Eucgr.E00532 Eucalyptus grandis
FAN04G0150 Fragaria x ananassa
FAN08G0461 Fragaria x ananassa
FAN13G0583 Fragaria x ananassa
FAN18G3487 Fragaria x ananassa
FvH4_5g01510 Fragaria vesca
Glyma.05G049500 Glycine max
Glyma.17G131500 Glycine max
Gohir.1Z049503 Gossypium hirsutum
Gohir.A01G000301 Gossypium hirsutum
Gohir.A03G086500 Gossypium hirsutum
Gohir.A06G201800 Gossypium hirsutum
Gohir.A07G000415 Gossypium hirsutum
Gohir.A10G000050 Gossypium hirsutum
Gohir.D02G105800 Gossypium hirsutum
Gohir.D06G220000 Gossypium hirsutum
Gorai.005G120200 Gossypium raimondii
Gorai.010G246400 Gossypium raimondii
GSVIVG01019857001 Vitis vinifera
HanXRQChr02g0048801 Helianthus annuus
HanXRQChr13g0416721 Helianthus annuus
HanXRQChr17g0533761 Helianthus annuus
Haze_08946 Corylus avellana
Hma1.2p1_0514F.1_g170080 Hydrangea macrophylla
HPP92_002471 Vanilla planifolia
Hund11772 Selenicereus undatus
Lalb_Chr05g0225061 Lupinus albus
Lalb_Chr09g0321171 Lupinus albus
Lj2A195T69 Lonicera japonica
Lj4g0016141 Lotus japonicus
Lj8A238G58 Lonicera japonica
Lsat_1_v5_gn_3_5440 Lactuca sativa
Lsat_1_v5_gn_6_7220 Lactuca sativa
Lsat_1_v5_gn_6_87800 Lactuca sativa
Manes.01G066800 Manihot esculenta
Manes.02G027500 Manihot esculenta
Mapoly0004s0125 Marchantia polymorpha
MBI04_g02076_MAGBIO Magnolia biondii
MBI04_g45341_MAGBIO Magnolia biondii
MCO09G760 Micromonas commoda
MD04G1067300 Malus domestica
MD06G1073000 Malus domestica
Medtr4g102750 Medicago truncatula
MELO3C014054.2 Cucumis melo
Migut.A00924 Erythranthe guttata
Migut.E01295 Erythranthe guttata
MSTRG.1894 Avicennia marina
MSTRG.25577 Avicennia marina
Nitab4.5_0001200g0130 Nicotiana tabacum
Nitab4.5_0002234g0080 Nicotiana tabacum
Nitab4.5_0002853g0090 Nicotiana tabacum
Nitab4.5_0002886g0010 Nicotiana tabacum
Nn1g01365 Nelumbo nucifera
Oeu062362.1 Olea europaea
Os02g0676000 Oryza sativa ssp. japonica
Peaxi162Scf00102g01431 Petunia axillaris
Peaxi162Scf00714g00618 Petunia axillaris
PGR042G3585 Punica granatum
PGSC0003DMG400004256 Solanum tuberosum
PGSC0003DMG400012528 Solanum tuberosum
PGSC0003DMG400022761 Solanum tuberosum
Phvul.003G212400 Phaseolus vulgaris
Potri.001G110100 Populus trichocarpa
Potri.003G121700 Populus trichocarpa
Pp3c11_9320 Physcomitrium patens
Pp3c6_27300 Physcomitrium patens
Pp3c7_18310 Physcomitrium patens
Pp3c7_18311 Physcomitrium patens
PRCOL_00002600 Prasinoderma coloniale
Prupe.5G091400 Prunus persica
Psat4g067160 Pisum sativum
PSO478G4332 Papaver somniferum
PSO782G0307 Papaver somniferum
QL12p017284 Quercus lobata
RcHm_v2.0_Chr7g0199181 Rosa chinensis
Sabra01G0083300 Salix brachista
Sabra03G0085900 Salix brachista
SalBow1G4609 Salvia bowleyana
SalBow6G6756 Salvia bowleyana
Sc07g0009550 Simmondsia chinensis
Sc13g0008440 Simmondsia chinensis
Sed0008694 Sechium edule
Sed0023323 Sechium edule
SEGI_17211 Sequoiadendron giganteum
SGA_v2.0_scaffold286G47093 Striga asiatica
SGA_v2.0_scaffold343G49466 Striga asiatica
SHI20220 Sapria himalayana
Solyc08g007860.4 Solanum lycopersicum
Solyc08g080340.3 Solanum lycopersicum
Solyc12g056420.2 Solanum lycopersicum
Sopen08g003790 Solanum pennellii
Sopen08g028680 Solanum pennellii
Sopen12g029010 Solanum pennellii
Sp1g11230 Schrenkiella parvula
Sp2g01520 Schrenkiella parvula
TAR162G0002 Trochodendron aralioides
TAR629G0482 Trochodendron aralioides
THA.LOC104818214 Tarenaya hassleriana
THA.LOC104823570 Tarenaya hassleriana
Thecc.06G017300 Theobroma cacao
Thecc.07G093700 Theobroma cacao
Thhalv10007564m.g Eutrema salsugineum
Thhalv10023446m.g Eutrema salsugineum
TPR.G19221 Trifolium pratense
TPR.G40545 Trifolium pratense
TWI15G0596 Tripterygium wilfordii
TWI60G0357 Tripterygium wilfordii
unitig_22.g5475 Utricularia gibba
vmacro22743 Vaccinium macrocarpon
VMungo1215G1357 Vigna mungo
Zm00001eb250480 Zea mays

User provided reference genes

Program Settings