Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21010 Brassica napus
A03p49880 Brassica napus
Aa31LG2G12560 Aethionema arabicum
Aa31LG9G12240 Aethionema arabicum
Aa31sc262G30 Aethionema arabicum
Actinidia02307 Actinidia chinensis
Actinidia04652 Actinidia chinensis
Actinidia26851 Actinidia chinensis
Ah.09g234170 Amaranthus hybridus
Ah.14g087540 Amaranthus hybridus
AL7G38470 Arabidopsis lyrata
Aqoxy4G02200 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.09PW0C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZLF8NQ Arachis hypogaea
AT4G16490 Arabidopsis thaliana
ATR0712G168 Amborella trichopoda
Atru.chr1.2368 Acer truncatum
AUR62012814 Chenopodium quinoa
AUR62021839 Chenopodium quinoa
BcaC06g33483 Brassica carinata
BcaC09g50355 Brassica carinata
BcaNung00189 Brassica carinata
BcaNung02874 Brassica carinata
BcaNung02875 Brassica carinata
BolC1t02576H Brassica oleracea
BolC7t45317H Brassica oleracea
BraA01t02016Z Brassica rapa
BraA03t14083Z Brassica rapa
C01p26290 Brassica napus
C07p47940 Brassica napus
CAN.G1263.22 Capsicum annuum
CAN.G696.20 Capsicum annuum
CANSAT56G0448 Cannabis sativa
CARHR222890 Cardamine hirsuta
Carub.0007s2501 Capsella rubella
Ca_00736_v3 Cicer arietinum L.
Cc09_g00700 Coffea canephora
CDE02G1583 Ceratophyllum demersum
CDE05G1329 Ceratophyllum demersum
CDE05G3523 Ceratophyllum demersum
Cfa000083 Carpinus fangiana
Ciclev10018015m.g Citrus clementina
CiPaw.09G104000 Carya illinoinensis
CiPaw.10G079000 Carya illinoinensis
ClCG01G021420 Citrullus lanatus
COL.COLO4_31904 Corchorus olitorius
Cpa.g.sc75.99 Carica papaya
CsaV3_6G048440 Cucumis sativus L.
CSS0010074 Camellia sinensis var. sinensis
CSS0020081 Camellia sinensis var. sinensis
CSS0034148 Camellia sinensis var. sinensis
DCAR_004899 Daucus carota
DCAR_030861 Daucus carota
Dinv05019 Davidia involucrata
Dinv32066 Davidia involucrata
Duzib160G0009 Durio zibethinus
Duzib192G0760 Durio zibethinus
Duzib235G1522 Durio zibethinus
ECA234G1693 Erigeron canadensis
EL10Ac8g20219 Beta vulgaris
Eucgr.D01428 Eucalyptus grandis
FAN21G0242 Fragaria x ananassa
FAN25G1985 Fragaria x ananassa
FvH4_3g00770 Fragaria vesca
Glyma.07G266400 Glycine max
Glyma.09G011300 Glycine max
Glyma.15G115800 Glycine max
Glyma.17G007900 Glycine max
Gohir.A05G175100 Gossypium hirsutum
Gohir.A06G154400 Gossypium hirsutum
Gohir.D05G178100 Gossypium hirsutum
Gohir.D06G161100 Gossypium hirsutum
Gorai.009G183500 Gossypium raimondii
Gorai.010G188000 Gossypium raimondii
GSVIVG01006098001 Vitis vinifera
HanXRQChr04g0094851 Helianthus annuus
HanXRQChr09g0238241 Helianthus annuus
HanXRQChr09g0254301 Helianthus annuus
HanXRQChr14g0451341 Helianthus annuus
HanXRQChr16g0517001 Helianthus annuus
HanXRQChr17g0559481 Helianthus annuus
Haze_06957 Corylus avellana
Hma1.2p1_0657F.1_g197030 Hydrangea macrophylla
HPP92_006094 Vanilla planifolia
Hund23399 Selenicereus undatus
Lalb_Chr18g0057071 Lupinus albus
Lalb_Chr20g0119331 Lupinus albus
Lj1A1241T70 Lonicera japonica
Lj2A260T84 Lonicera japonica
Lj6g0020811 Lotus japonicus
Lj7C75G1 Lonicera japonica
Lsat_1_v5_gn_4_63420 Lactuca sativa
Lsat_1_v5_gn_7_13800 Lactuca sativa
Lsat_1_v5_gn_9_117501 Lactuca sativa
Manes.08G070984 Manihot esculenta
MBI16_g11545_MAGBIO Magnolia biondii
MBI16_g11546_MAGBIO Magnolia biondii
MBI16_g42305_MAGBIO Magnolia biondii
MD05G1359600 Malus domestica
MD07G1107900 Malus domestica
MD10G1335100 Malus domestica
MD11G1170200 Malus domestica
Medtr2g013940 Medicago truncatula
Medtr2g026130 Medicago truncatula
MELO3C000051.2 Cucumis melo
MELO3C007441.2 Cucumis melo
MELO3C034797.2 Cucumis melo
MELO3C035377.2 Cucumis melo
Migut.H01613 Erythranthe guttata
Migut.M01414 Erythranthe guttata
MSTRG.14606 Avicennia marina
MSTRG.16032 Avicennia marina
MSTRG.7156 Avicennia marina
Nitab4.5_0000143g0100 Nicotiana tabacum
Nitab4.5_0001109g0090 Nicotiana tabacum
Nitab4.5_0003626g0080 Nicotiana tabacum
Nitab4.5_0004646g0090 Nicotiana tabacum
Nn1g00499 Nelumbo nucifera
Nn1g00888 Nelumbo nucifera
Nn1g03263 Nelumbo nucifera
Nn1g07428 Nelumbo nucifera
Nn3g16766 Nelumbo nucifera
Nn3g17687 Nelumbo nucifera
Nn3g17714 Nelumbo nucifera
Nn4g22552 Nelumbo nucifera
Nn5g28912 Nelumbo nucifera
Nn5g30699 Nelumbo nucifera
Nn6g31904 Nelumbo nucifera
Oeu002770.1 Olea europaea
Oeu022953.1 Olea europaea
Oeu030109.1 Olea europaea
Oeu047063.1 Olea europaea
Os07g0584900 Oryza sativa ssp. japonica
Peaxi162Scf00352g00096 Petunia axillaris
Peaxi162Scf00520g00221 Petunia axillaris
PGR004G1420 Punica granatum
PGR042G2126 Punica granatum
PGSC0003DMG400013286 Solanum tuberosum
PGSC0003DMG400023602 Solanum tuberosum
Phvul.003G084700 Phaseolus vulgaris
Phvul.006G142100 Phaseolus vulgaris
Potri.006G015100 Populus trichocarpa
Potri.016G010800 Populus trichocarpa
Prupe.4G008500 Prunus persica
Psat1g174720 Pisum sativum
PSO541G0019 Papaver somniferum
PSO541G5465 Papaver somniferum
PSO675G9394 Papaver somniferum
PSO781G0286 Papaver somniferum
QL04p007610 Quercus lobata
QL05p068721 Quercus lobata
QL05p069094 Quercus lobata
RcHm_v2.0_Chr5g0001011 Rosa chinensis
Rhsim03G0174900 Rhododendron simsii
Rhsim13G0144100 Rhododendron simsii
Sabra06G0010600 Salix brachista
Sabra16G0014300 Salix brachista
SalBow8G1766 Salvia bowleyana
Sc05g0009680 Simmondsia chinensis
Sc24g0000310 Simmondsia chinensis
Sed0004311 Sechium edule
Sed0014537 Sechium edule
SEGI_31979 Sequoiadendron giganteum
SGA_v2.0_scaffold41G15719 Striga asiatica
SGA_v2.0_scaffold4G01862 Striga asiatica
SGA_v2.0_scaffold7G03732 Striga asiatica
SGA_v2.0_scaffold7G03734 Striga asiatica
SGA_v2.0_scaffold89G27513 Striga asiatica
Solyc04g014810.3 Solanum lycopersicum
Solyc11g012440.1 Solanum lycopersicum
Sopen04g006940 Solanum pennellii
Sopen11g007180 Solanum pennellii
Sp7g15040 Schrenkiella parvula
TAR626G1558 Trochodendron aralioides
TAR629G3525 Trochodendron aralioides
TAR631G0001 Trochodendron aralioides
THA.LOC104813330 Tarenaya hassleriana
THA.LOC104815484 Tarenaya hassleriana
Thecc.06G235100 Theobroma cacao
Thhalv10025098m.g Eutrema salsugineum
TPR.G10581 Trifolium pratense
TWI38G1278 Tripterygium wilfordii
TWI63G1747 Tripterygium wilfordii
unitig_32.g11369 Utricularia gibba
unitig_32.g11370 Utricularia gibba
unitig_748.g7602 Utricularia gibba
vmacro03632 Vaccinium macrocarpon
VMungo0331G0898 Vigna mungo
VMungo0540G0026 Vigna mungo
VMungo0540G1194 Vigna mungo
VMungo1215G1690 Vigna mungo
Zm00001eb366730 Zea mays
Zm00001eb419740 Zea mays

User provided reference genes

Program Settings