Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p27010 Brassica napus
A05p10120 Brassica napus
Aa31LG2G14340 Aethionema arabicum
Aa31LG9G15750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2406 Anthoceros agrestis
Actinidia01250 Actinidia chinensis
Ah.12g058430 Amaranthus hybridus
AL4G31650 Arabidopsis lyrata
Aqoxy5G03565 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2M3042 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.41P0GI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B24I2L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DFZK61 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GAUN3U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JPC2KC Arachis hypogaea
AT2G35610 Arabidopsis thaliana
ATR0568G062 Amborella trichopoda
Atru.chr8.2617 Acer truncatum
Atru.chr8.2622 Acer truncatum
AUR62010484 Chenopodium quinoa
AUR62030410 Chenopodium quinoa
AUR62032943 Chenopodium quinoa
AUR62032944 Chenopodium quinoa
BcaB02g09412 Brassica carinata
BcaB06g28849 Brassica carinata
BcaB06g28850 Brassica carinata
BcaC02g07760 Brassica carinata
BcaC02g11616 Brassica carinata
BcaC02g11676 Brassica carinata
BcaC02g11677 Brassica carinata
BolC4t22898H Brassica oleracea
BolC4t27926H Brassica oleracea
BraA04t18202Z Brassica rapa
BraA05t19953Z Brassica rapa
C04p12510 Brassica napus
C04p13130 Brassica napus
C04p13140 Brassica napus
C04p64420 Brassica napus
CAN.G998.13 Capsicum annuum
CANSAT80G0877 Cannabis sativa
CARHR129800 Cardamine hirsuta
Carub.0004s1730 Capsella rubella
Ca_22456_v3 Cicer arietinum L.
Ca_25048_v3 Cicer arietinum L.
CBR_g11065 Chara braunii
CBR_g19279 Chara braunii
CBR_g30748 Chara braunii
CBR_g41334 Chara braunii
CBR_g50705 Chara braunii
CBR_g56719 Chara braunii
CBR_g56720 Chara braunii
CBR_g56721 Chara braunii
CBR_g8752 Chara braunii
Cc04_g11570 Coffea canephora
Cc04_g11580 Coffea canephora
Cc04_g11590 Coffea canephora
Cc08_g05880 Coffea canephora
Cc08_g05890 Coffea canephora
CDE01G0249 Ceratophyllum demersum
CDE04G2998 Ceratophyllum demersum
Cfa012300 Carpinus fangiana
Ciclev10011269m.g Citrus clementina
CiPaw.11G074400 Carya illinoinensis
CiPaw.12G055200 Carya illinoinensis
ClCG11G016080 Citrullus lanatus
COL.COLO4_16751 Corchorus olitorius
Cpa.g.sc2620.1 Carica papaya
Cpa.g.sc352.2 Carica papaya
Cpa.g.sc90.39 Carica papaya
Cre01.g000400 Chlamydomonas reinhardtii
Cre01.g000450 Chlamydomonas reinhardtii
Cre01.g000500 Chlamydomonas reinhardtii
Cre01.g000550 Chlamydomonas reinhardtii
Cre04.g217949 Chlamydomonas reinhardtii
Cre07.g332500 Chlamydomonas reinhardtii
Cre07.g340950 Chlamydomonas reinhardtii
Cre07.g341153 Chlamydomonas reinhardtii
Cre13.g568200 Chlamydomonas reinhardtii
Cre14.g629000 Chlamydomonas reinhardtii
CsaV3_4G027890 Cucumis sativus L.
CSS0026658 Camellia sinensis var. sinensis
CSS0037399 Camellia sinensis var. sinensis
DCAR_004534 Daucus carota
Duzib205G1391 Durio zibethinus
ECA246G1310 Erigeron canadensis
EL10Ac5g12587 Beta vulgaris
Eucgr.E01147 Eucalyptus grandis
FAN08G1408 Fragaria x ananassa
FAN13G1207 Fragaria x ananassa
FAN18G0768 Fragaria x ananassa
FAN18G2203 Fragaria x ananassa
FvH4_5g25240 Fragaria vesca
Glyma.01G153600 Glycine max
Glyma.11G091000 Glycine max
Glyma.16G076700 Glycine max
Glyma.16G109700 Glycine max
Gohir.A08G149000 Gossypium hirsutum
Gohir.A12G201400 Gossypium hirsutum
Gohir.D08G170000 Gossypium hirsutum
Gohir.D12G204200 Gossypium hirsutum
Gorai.004G177500 Gossypium raimondii
Gorai.008G219000 Gossypium raimondii
GSVIVG01036881001 Vitis vinifera
HanXRQChr06g0173181 Helianthus annuus
HanXRQChr17g0537321 Helianthus annuus
HanXRQChr17g0537331 Helianthus annuus
HanXRQChr17g0537351 Helianthus annuus
Haze_08429 Corylus avellana
Hma1.2p1_0839F.1_g226340 Hydrangea macrophylla
HPP92_014853 Vanilla planifolia
Hund14306 Selenicereus undatus
Lalb_Chr05g0215151 Lupinus albus
Lalb_Chr05g0229201 Lupinus albus
Lalb_Chr16g0391801 Lupinus albus
Lj2g0004183 Lotus japonicus
Lj4g0008068 Lotus japonicus
Lj8A8T29 Lonicera japonica
Lj8C8T8 Lonicera japonica
Lsat_1_v5_gn_3_20301 Lactuca sativa
Manes.15G191800 Manihot esculenta
Manes.17G001100 Manihot esculenta
Mapoly0019s0126 Marchantia polymorpha
MBI06_g04284_MAGBIO Magnolia biondii
MBI06_g04285_MAGBIO Magnolia biondii
MBI15_g33455_MAGBIO Magnolia biondii
MCO03G075 Micromonas commoda
MCO04G331 Micromonas commoda
MCO06G136 Micromonas commoda
MCO09G799 Micromonas commoda
MCO13G070 Micromonas commoda
MCO14G411 Micromonas commoda
MD06G1008500 Malus domestica
MD16G1285600 Malus domestica
Medtr5g025590 Medicago truncatula
Medtr8g072310 Medicago truncatula
MELO3C010524.2 Cucumis melo
Migut.A00523 Erythranthe guttata
MSTRG.25746 Avicennia marina
Nitab4.5_0002603g0020 Nicotiana tabacum
Nitab4.5_0006371g0020 Nicotiana tabacum
Nn3g19110 Nelumbo nucifera
Oeu033614.1 Olea europaea
Oeu036053.1 Olea europaea
Os03g0586300 Oryza sativa ssp. japonica
Peaxi162Scf00053g00006 Petunia axillaris
PGR042G1333 Punica granatum
Phvul.002G122000 Phaseolus vulgaris
Phvul.003G278500 Phaseolus vulgaris
Potri.004G235800 Populus trichocarpa
Pp3c12_18450 Physcomitrium patens
PRCOL_00000763 Prasinoderma coloniale
PRCOL_00002802 Prasinoderma coloniale
PRCOL_00003662 Prasinoderma coloniale
PRCOL_00003997 Prasinoderma coloniale
PRCOL_00004785 Prasinoderma coloniale
PRCOL_00005418 Prasinoderma coloniale
PRCOL_00007053 Prasinoderma coloniale
Prupe.5G011600 Prunus persica
Psat2g145280 Pisum sativum
Psat4g107640 Pisum sativum
PSO502G0023 Papaver somniferum
PSO675G5456 Papaver somniferum
PSO675G7261 Papaver somniferum
QL12p003762 Quercus lobata
RcHm_v2.0_Chr7g0215361 Rosa chinensis
Rhsim11G0037300 Rhododendron simsii
Sabra01G0180200 Salix brachista
SalBow4G0461 Salvia bowleyana
Sc07g0007990 Simmondsia chinensis
Sed0016507 Sechium edule
Sed0024265 Sechium edule
Sed0027808 Sechium edule
SEGI_27818 Sequoiadendron giganteum
SGA_v2.0_scaffold96G29103 Striga asiatica
SHI32767 Sapria himalayana
SMO329G0009 Selaginella moellendorffii
Solyc08g075340.3 Solanum lycopersicum
Sopen08g023950 Solanum pennellii
Sp4g17820 Schrenkiella parvula
TAR374G0820 Trochodendron aralioides
TAR374G1176 Trochodendron aralioides
TAR375G0128 Trochodendron aralioides
THA.LOC104798529 Tarenaya hassleriana
THA.LOC104814389 Tarenaya hassleriana
Thecc.03G319900 Theobroma cacao
Thhalv10016368m.g Eutrema salsugineum
TPR.G14272 Trifolium pratense
TPR.G8991 Trifolium pratense
TWI60G1302 Tripterygium wilfordii
vmacro00095 Vaccinium macrocarpon
VMungo0251G1439 Vigna mungo
VMungo1215G0924 Vigna mungo
Zm00001eb049170 Zea mays

User provided reference genes

Program Settings