Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p29580 Brassica napus
A07p39760 Brassica napus
A07p39770 Brassica napus
A08p11440 Brassica napus
A08p30400 Brassica napus
A09p59950 Brassica napus
Aa31LG4G4210 Aethionema arabicum
Aa31LG7G3130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2698 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2699 Anthoceros agrestis
Actinidia18941 Actinidia chinensis
Actinidia35078 Actinidia chinensis
Ah.02g114480 Amaranthus hybridus
Ah.11g047040 Amaranthus hybridus
AL1G30890 Arabidopsis lyrata
AL2G33750 Arabidopsis lyrata
Aqoxy3G03927 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5B91PZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q237M7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SXG9J3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UJ64TK Arachis hypogaea
AT1G18460 Arabidopsis thaliana
AT1G73920 Arabidopsis thaliana
ATR0681G201 Amborella trichopoda
Atru.chr9.784 Acer truncatum
AUR62032198 Chenopodium quinoa
AUR62036965 Chenopodium quinoa
BcaB03g12979 Brassica carinata
BcaB03g12981 Brassica carinata
BcaB03g15736 Brassica carinata
BcaC07g37849 Brassica carinata
BcaC07g41329 Brassica carinata
BcaC08g45614 Brassica carinata
BcaNung05446 Brassica carinata
BolC6t38489H Brassica oleracea
BolC6t39839H Brassica oleracea
BolC8t48238H Brassica oleracea
BolC8t49489H Brassica oleracea
BolC8t51888H Brassica oleracea
BraA07t30599Z Brassica rapa
BraA07t31524Z Brassica rapa
BraA08t33137Z Brassica rapa
BraA08t33138Z Brassica rapa
BraA08t34973Z Brassica rapa
BraA09t41366Z Brassica rapa
C06p33740 Brassica napus
C06p48040 Brassica napus
C08p18630 Brassica napus
C08p43390 Brassica napus
CAN.G150.11 Capsicum annuum
CAN.G438.122 Capsicum annuum
CAN.G841.19 Capsicum annuum
CANSAT80G0782 Cannabis sativa
CARHR019070 Cardamine hirsuta
CARHR067030 Cardamine hirsuta
Carub.0001s1809 Capsella rubella
Carub.0002s2069 Capsella rubella
Ca_17344_v3 Cicer arietinum L.
CBR_g165 Chara braunii
Cc04_g07430 Coffea canephora
CDE04G1171 Ceratophyllum demersum
Ciclev10019107m.g Citrus clementina
CiPaw.16G084500 Carya illinoinensis
ClCG04G011250 Citrullus lanatus
COL.COLO4_16239 Corchorus olitorius
Cpa.g.sc13.27 Carica papaya
Cre12.g541352 Chlamydomonas reinhardtii
CsaV3_1G006500 Cucumis sativus L.
CSS0035183 Camellia sinensis var. sinensis
DCAR_011345 Daucus carota
DCAR_011547 Daucus carota
DCAR_023188 Daucus carota
DCAR_023189 Daucus carota
Dinv07364 Davidia involucrata
Dinv40426 Davidia involucrata
Duzib068G0226 Durio zibethinus
ECA232G0305 Erigeron canadensis
ECA246G2878 Erigeron canadensis
EL10Ac5g11259 Beta vulgaris
Eucgr.B00703 Eucalyptus grandis
Eucgr.K02663 Eucalyptus grandis
FAN04G2140 Fragaria x ananassa
FAN08G0854 Fragaria x ananassa
FAN13G2824 Fragaria x ananassa
FAN18G0309 Fragaria x ananassa
FAN18G3376 Fragaria x ananassa
FvH4_5g12600 Fragaria vesca
Glyma.05G232700 Glycine max
Glyma.07G089400 Glycine max
Glyma.08G040100 Glycine max
Glyma.09G187400 Glycine max
Gohir.A11G006800 Gossypium hirsutum
Gohir.A11G006900 Gossypium hirsutum
Gohir.D11G005900 Gossypium hirsutum
Gohir.D11G005950 Gossypium hirsutum
Gohir.D11G006000 Gossypium hirsutum
Gorai.007G007100 Gossypium raimondii
Gorai.007G007200 Gossypium raimondii
GSVIVG01008249001 Vitis vinifera
HanXRQChr05g0152881 Helianthus annuus
HanXRQChr09g0269901 Helianthus annuus
HanXRQChr16g0501751 Helianthus annuus
HanXRQChr16g0501761 Helianthus annuus
Haze_18628 Corylus avellana
Hma1.2p1_0340F.1_g129780 Hydrangea macrophylla
Hma1.2p1_3191F.1_g333810 Hydrangea macrophylla
HPP92_024716 Vanilla planifolia
Hund02522 Selenicereus undatus
Hund10017 Selenicereus undatus
Lalb_Chr05g0222641 Lupinus albus
Lalb_Chr14g0371311 Lupinus albus
Lalb_Chr22g0352971 Lupinus albus
Lj2g0005362 Lotus japonicus
Lj4g0015559 Lotus japonicus
Lj5C146G11 Lonicera japonica
Lsat_1_v5_gn_4_115841 Lactuca sativa
Lsat_1_v5_gn_5_25181 Lactuca sativa
Manes.01G020100 Manihot esculenta
Manes.05G138900 Manihot esculenta
Mapoly0004s0087 Marchantia polymorpha
MBI09_g04371_MAGBIO Magnolia biondii
MBI16_g06256_MAGBIO Magnolia biondii
MD06G1212200 Malus domestica
MD14G1222700 Malus domestica
Medtr6g085070 Medicago truncatula
Medtr8g103850 Medicago truncatula
MELO3C002077.2 Cucumis melo
Migut.I00385 Erythranthe guttata
MSTRG.11321 Avicennia marina
Nitab4.5_0000208g0180 Nicotiana tabacum
Nitab4.5_0000410g0010 Nicotiana tabacum
Nitab4.5_0001599g0130 Nicotiana tabacum
Nitab4.5_0002043g0080 Nicotiana tabacum
Nn3g17767 Nelumbo nucifera
Nn4g23755 Nelumbo nucifera
Oeu024322.1 Olea europaea
Os01g0521400 Oryza sativa ssp. japonica
Peaxi162Scf00015g00839 Petunia axillaris
Peaxi162Scf00804g00007 Petunia axillaris
PGR044G0196 Punica granatum
PGR083G2725 Punica granatum
PGSC0003DMG400004445 Solanum tuberosum
PGSC0003DMG400005709 Solanum tuberosum
Phvul.002G315000 Phaseolus vulgaris
Phvul.004G160400 Phaseolus vulgaris
Potri.012G060600 Populus trichocarpa
Pp3c18_6270 Physcomitrium patens
Pp3c19_13160 Physcomitrium patens
Pp3c20_9110 Physcomitrium patens
Pp3c8_18170 Physcomitrium patens
PRCOL_00007282 Prasinoderma coloniale
Prupe.5G218200 Prunus persica
Psat1g039360 Pisum sativum
Psat7g012440 Pisum sativum
PSO063G0435 Papaver somniferum
PSO782G5001 Papaver somniferum
QL10p023576 Quercus lobata
RcHm_v2.0_Chr7g0184731 Rosa chinensis
Rhsim12G0144300 Rhododendron simsii
Sabra12G0043600 Salix brachista
SalBow5G5009 Salvia bowleyana
Sc04g0003690 Simmondsia chinensis
Sed0000678 Sechium edule
Sed0001727 Sechium edule
SEGI_10894 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08810 Striga asiatica
SGA_v2.0_scaffold25G10984 Striga asiatica
SHI30433 Sapria himalayana
SMO164G0035 Selaginella moellendorffii
Solyc03g119720.4 Solanum lycopersicum
Solyc12g038160.2 Solanum lycopersicum
Sopen03g038560 Solanum pennellii
Sopen12g017870 Solanum pennellii
Sp1g16400 Schrenkiella parvula
Sp5g29120 Schrenkiella parvula
TAR371G0923 Trochodendron aralioides
THA.LOC104812131 Tarenaya hassleriana
Thecc.03G029700 Theobroma cacao
Thhalv10006963m.g Eutrema salsugineum
Thhalv10018209m.g Eutrema salsugineum
TPR.G21707 Trifolium pratense
TPR.G31443 Trifolium pratense
TPR.G31445 Trifolium pratense
TPR.G40243 Trifolium pratense
TWI15G0244 Tripterygium wilfordii
TWI81G0124 Tripterygium wilfordii
unitig_699.g19434 Utricularia gibba
unitig_699.g19435 Utricularia gibba
vmacro16455 Vaccinium macrocarpon
vmacro22487 Vaccinium macrocarpon
VMungo0251G0053 Vigna mungo
VMungo0464G0349 Vigna mungo
Zm00001eb132660 Zea mays

User provided reference genes

Program Settings