Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p40910 Brassica napus
A02p40920 Brassica napus
A05p29870 Brassica napus
A08p26910 Brassica napus
A09p68660 Brassica napus
A09p68670 Brassica napus
A10p25960 Brassica napus
Aa31LG3G15420 Aethionema arabicum
Aa31LG8G16630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1097 Anthoceros agrestis
Actinidia01196 Actinidia chinensis
Actinidia29888 Actinidia chinensis
Actinidia30305 Actinidia chinensis
Ah.11g044700 Amaranthus hybridus
AL6G22530 Arabidopsis lyrata
Aqoxy7G04069 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.60DKDN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IE7M3R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QX44E6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X6QCD5 Arachis hypogaea
AT5G11780 Arabidopsis thaliana
ATR0789G133 Amborella trichopoda
ATR0789G162 Amborella trichopoda
Atru.chr7.1041 Acer truncatum
Atru.chr7.1545 Acer truncatum
AUR62009165 Chenopodium quinoa
AUR62022058 Chenopodium quinoa
AUR62043933 Chenopodium quinoa
BcaB06g29645 Brassica carinata
BcaC04g19195 Brassica carinata
BolC9t59332H Brassica oleracea
BraA06t23891Z Brassica rapa
BraA10t44658Z Brassica rapa
C02p02900 Brassica napus
C04p65130 Brassica napus
C08p16650 Brassica napus
C08p16660 Brassica napus
C09p65040 Brassica napus
CANSAT25G2654 Cannabis sativa
CANSAT56G3152 Cannabis sativa
CARHR201410 Cardamine hirsuta
Carub.0006s1031 Capsella rubella
Ca_13176_v3 Cicer arietinum L.
Cc06_g11090 Coffea canephora
Cc08_g10420 Coffea canephora
CDE02G0844 Ceratophyllum demersum
Cfa003115 Carpinus fangiana
Ciclev10007935m.g Citrus clementina
Ciclev10007991m.g Citrus clementina
CiPaw.04G152000 Carya illinoinensis
CiPaw.16G029300 Carya illinoinensis
ClCG03G015790 Citrullus lanatus
ClCG05G017780 Citrullus lanatus
COL.COLO4_21041 Corchorus olitorius
Cpa.g.sc7.246 Carica papaya
Cpa.g.sc7.247 Carica papaya
CsaV3_1G040220 Cucumis sativus L.
CsaV3_4G035550 Cucumis sativus L.
CsaV3_UNG062480 Cucumis sativus L.
CSS0001901 Camellia sinensis var. sinensis
CSS0008213 Camellia sinensis var. sinensis
DCAR_004434 Daucus carota
DCAR_011998 Daucus carota
Dinv27976 Davidia involucrata
Dinv36743 Davidia involucrata
Duzib168G1022 Durio zibethinus
Duzib168G2161 Durio zibethinus
ECA236G1610 Erigeron canadensis
ECA246G1935 Erigeron canadensis
EL10Ac2g03913 Beta vulgaris
EL10Ac2g03914 Beta vulgaris
Eucgr.C03022 Eucalyptus grandis
Eucgr.C03664 Eucalyptus grandis
Eucgr.L03304 Eucalyptus grandis
FAN19G1852 Fragaria x ananassa
FAN23G1479 Fragaria x ananassa
FAN26G2436 Fragaria x ananassa
FAN26G3060 Fragaria x ananassa
FvH4_1g07060 Fragaria vesca
Glyma.01G003600 Glycine max
Glyma.07G128300 Glycine max
Glyma.14G093500 Glycine max
Glyma.17G230200 Glycine max
Gohir.A05G043100 Gossypium hirsutum
Gohir.A07G010200 Gossypium hirsutum
Gohir.D05G044800 Gossypium hirsutum
Gohir.D07G010500 Gossypium hirsutum
Gorai.001G010900 Gossypium raimondii
Gorai.009G045900 Gossypium raimondii
GSVIVG01015234001 Vitis vinifera
GSVIVG01035358001 Vitis vinifera
HanXRQChr02g0044571 Helianthus annuus
HanXRQChr06g0173831 Helianthus annuus
Haze_18202 Corylus avellana
Haze_25885 Corylus avellana
Hma1.2p1_0482F.1_g162640 Hydrangea macrophylla
Hma1.2p1_0798F.1_g219590 Hydrangea macrophylla
Hma1.2p1_0798F.1_g219600 Hydrangea macrophylla
Hma1.2p1_1074F.1_g254274 Hydrangea macrophylla
HPP92_009156 Vanilla planifolia
Hund03347 Selenicereus undatus
Lalb_Chr22g0356041 Lupinus albus
Lalb_Chr24g0393871 Lupinus albus
Lj2g0016122 Lotus japonicus
Lj5g0027111 Lotus japonicus
Lj7A278T10 Lonicera japonica
Lj7A672T62 Lonicera japonica
Lj7C279G1 Lonicera japonica
Lsat_1_v5_gn_3_24260 Lactuca sativa
Lsat_1_v5_gn_8_87540 Lactuca sativa
Manes.03G030833 Manihot esculenta
Manes.03G031262 Manihot esculenta
Manes.03G031366 Manihot esculenta
Manes.03G031601 Manihot esculenta
Manes.03G034901 Manihot esculenta
Manes.03G047000 Manihot esculenta
Mapoly0075s0033 Marchantia polymorpha
MBI03_g13775_MAGBIO Magnolia biondii
MD02G1074500 Malus domestica
Medtr1g016740 Medicago truncatula
Medtr6g091790 Medicago truncatula
Medtr6g091900 Medicago truncatula
Medtr6g092160 Medicago truncatula
Medtr6g092190 Medicago truncatula
MELO3C015449.2 Cucumis melo
MELO3C016862.2 Cucumis melo
Migut.A00144 Erythranthe guttata
MSTRG.11666 Avicennia marina
MSTRG.26404 Avicennia marina
Nitab4.5_0001179g0130 Nicotiana tabacum
Nitab4.5_0001584g0040 Nicotiana tabacum
Nn6g35422 Nelumbo nucifera
Oeu018651.1 Olea europaea
Oeu021470.1 Olea europaea
Oeu039611.1 Olea europaea
Os01g0600300 Oryza sativa ssp. japonica
Peaxi162Scf00136g00059 Petunia axillaris
PGR044G1201 Punica granatum
PGSC0003DMG400002203 Solanum tuberosum
PGSC0003DMG400008432 Solanum tuberosum
Phvul.001G034000 Phaseolus vulgaris
Phvul.004G172000 Phaseolus vulgaris
Potri.006G230900 Populus trichocarpa
Pp3c10_12370 Physcomitrium patens
Prupe.7G213400 Prunus persica
Psat6g019320 Pisum sativum
PSO210G5813 Papaver somniferum
PSO210G6318 Papaver somniferum
QL02p001408 Quercus lobata
QL02p063126 Quercus lobata
RcHm_v2.0_Chr2g0092961 Rosa chinensis
RcHm_v2.0_Chr4g0406051 Rosa chinensis
RcHm_v2.0_Chr4g0425381 Rosa chinensis
Rhsim03G0234300 Rhododendron simsii
Rhsim11G0045200 Rhododendron simsii
Sabra06G0179100 Salix brachista
SalBow1G0256 Salvia bowleyana
SalBow4G0582 Salvia bowleyana
SalBow4G1879 Salvia bowleyana
Sc18g0001860 Simmondsia chinensis
Sc18g0001870 Simmondsia chinensis
Sc23g0005570 Simmondsia chinensis
Sed0013907 Sechium edule
Sed0020375 Sechium edule
Sed0023083 Sechium edule
SEGI_10797 Sequoiadendron giganteum
SEGI_33762 Sequoiadendron giganteum
SGA_v2.0_scaffold187G40255 Striga asiatica
SGA_v2.0_scaffold734G53534 Striga asiatica
Solyc07g032260.3 Solanum lycopersicum
Solyc08g065440.4 Solanum lycopersicum
Sopen07g015920 Solanum pennellii
Sopen07g015930 Solanum pennellii
Sopen08g019050 Solanum pennellii
Sp6g31820 Schrenkiella parvula
TAR626G0286 Trochodendron aralioides
THA.LOC104814609 Tarenaya hassleriana
Thecc.06G128700 Theobroma cacao
Thecc.09G052400 Theobroma cacao
Thecc.09G092900 Theobroma cacao
Thhalv10013348m.g Eutrema salsugineum
TPR.G13110 Trifolium pratense
TPR.G21889 Trifolium pratense
TPR.G35499 Trifolium pratense
TWI32G0386 Tripterygium wilfordii
TWI34G1305 Tripterygium wilfordii
unitig_699.g19305 Utricularia gibba
vmacro00153 Vaccinium macrocarpon
vmacro06276 Vaccinium macrocarpon
VMungo0464G1250 Vigna mungo
VMungo0647G0716 Vigna mungo
Zm00001eb161340 Zea mays
Zm00001eb357710 Zea mays

User provided reference genes

Program Settings