Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25800 Brassica napus
A06p19950 Brassica napus
A06p27250 Brassica napus
Aa31LG8G16720 Aethionema arabicum
Actinidia21987 Actinidia chinensis
Actinidia40471 Actinidia chinensis
Ah.14g079820 Amaranthus hybridus
AL5G26940 Arabidopsis lyrata
Aqoxy7G02181 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4IXQ36 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EPB35R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea
AT3G47650 Arabidopsis thaliana
ATR1120G202 Amborella trichopoda
Atru.BG.3.p Acer truncatum
Atru.chr7.1160 Acer truncatum
AUR62011130 Chenopodium quinoa
AUR62013357 Chenopodium quinoa
BcaB01g00893 Brassica carinata
BcaB02g10692 Brassica carinata
BcaB05g23065 Brassica carinata
BcaC01g01786 Brassica carinata
BcaC01g02287 Brassica carinata
BcaC09g49812 Brassica carinata
BolC1t03207H Brassica oleracea
BolC3t18976H Brassica oleracea
BraA01t02496Z Brassica rapa
BraA06t25078Z Brassica rapa
BraA06t25666Z Brassica rapa
C01p32690 Brassica napus
C03p67010 Brassica napus
C03p71880 Brassica napus
CANSAT11G2285 Cannabis sativa
CANSAT25G1571 Cannabis sativa
CARHR156330 Cardamine hirsuta
Carub.0005s1378 Capsella rubella
Ca_21681_v3 Cicer arietinum L.
Cc06_g08500 Coffea canephora
Cc08_g00790 Coffea canephora
CDE04G0424 Ceratophyllum demersum
CDE06G2093 Ceratophyllum demersum
Cfa003377 Carpinus fangiana
Ciclev10009875m.g Citrus clementina
Ciclev10009876m.g Citrus clementina
CiPaw.04G171200 Carya illinoinensis
CiPaw.08G011800 Carya illinoinensis
ClCG05G016980 Citrullus lanatus
ClCG11G003050 Citrullus lanatus
COL.COLO4_18845 Corchorus olitorius
Cpa.g.sc259.5 Carica papaya
Cpa.g.sc75.27 Carica papaya
CsaV3_2G002870 Cucumis sativus L.
CsaV3_3G046470 Cucumis sativus L.
CSS0006865 Camellia sinensis var. sinensis
CSS0014531 Camellia sinensis var. sinensis
CSS0024061 Camellia sinensis var. sinensis
CSS0026750 Camellia sinensis var. sinensis
CSS0047823 Camellia sinensis var. sinensis
DCAR_003091 Daucus carota
Dinv15950 Davidia involucrata
Dinv18245 Davidia involucrata
Dinv36526 Davidia involucrata
Dinv41510 Davidia involucrata
Duzib150G0412 Durio zibethinus
Duzib168G0240 Durio zibethinus
ECA240G1743 Erigeron canadensis
ECA246G5170 Erigeron canadensis
EL10Ac8g18657 Beta vulgaris
Eucgr.C01175 Eucalyptus grandis
Eucgr.C02783 Eucalyptus grandis
FAN15G0527 Fragaria x ananassa
FAN19G1671 Fragaria x ananassa
FAN20G1584 Fragaria x ananassa
FAN23G0028 Fragaria x ananassa
FAN24G0346 Fragaria x ananassa
FAN26G0344 Fragaria x ananassa
FAN27G1347 Fragaria x ananassa
FAN28G2448 Fragaria x ananassa
FvH4_1g03260 Fragaria vesca
FvH4_2g29200 Fragaria vesca
Glyma.04G067500 Glycine max
Glyma.04G147800 Glycine max
Glyma.06G069100 Glycine max
Glyma.06G222000 Glycine max
Glyma.13G167200 Glycine max
Glyma.17G114800 Glycine max
Gohir.A06G055900 Gossypium hirsutum
Gohir.A06G098204 Gossypium hirsutum
Gohir.A06G143050 Gossypium hirsutum
Gohir.A10G061300 Gossypium hirsutum
Gohir.A10G065840 Gossypium hirsutum
Gohir.A13G199600 Gossypium hirsutum
Gohir.D06G054550 Gossypium hirsutum
Gohir.D06G099500 Gossypium hirsutum
Gohir.D08G087900 Gossypium hirsutum
Gohir.D13G205100 Gossypium hirsutum
Gorai.010G063900 Gossypium raimondii
Gorai.010G114400 Gossypium raimondii
Gorai.013G234000 Gossypium raimondii
GSVIVG01015532001 Vitis vinifera
GSVIVG01015534001 Vitis vinifera
GSVIVG01035845001 Vitis vinifera
HanXRQChr09g0242821 Helianthus annuus
HanXRQChr16g0505371 Helianthus annuus
Haze_21529 Corylus avellana
Haze_25576 Corylus avellana
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla
HPP92_000667 Vanilla planifolia
Hund09242 Selenicereus undatus
Lalb_Chr07g0178961 Lupinus albus
Lalb_Chr08g0244061 Lupinus albus
Lalb_Chr13g0301861 Lupinus albus
Lj1g0012711 Lotus japonicus
Lj4g0026965 Lotus japonicus
Lsat_1_v5_gn_5_30800 Lactuca sativa
Lsat_1_v5_gn_7_45281 Lactuca sativa
Lsat_1_v5_gn_8_58621 Lactuca sativa
Manes.06G058601 Manihot esculenta
Manes.14G132200 Manihot esculenta
Manes.16G121200 Manihot esculenta
MBI01_g36269_MAGBIO Magnolia biondii
MCO02G182 Micromonas commoda
MD02G1031600 Malus domestica
MD15G1124500 Malus domestica
MD15G1173100 Malus domestica
Medtr3g107397 Medicago truncatula
Medtr4g114180 Medicago truncatula
MELO3C004506.2 Cucumis melo
MELO3C030460.2 Cucumis melo
Migut.K00478 Erythranthe guttata
Migut.K00479 Erythranthe guttata
MSTRG.21979 Avicennia marina
Nitab4.5_0002658g0060 Nicotiana tabacum
Nitab4.5_0007032g0020 Nicotiana tabacum
Nitab4.5_0010481g0030 Nicotiana tabacum
Nn2g12030 Nelumbo nucifera
Nn8g39452 Nelumbo nucifera
Oeu007500.1 Olea europaea
Oeu018469.1 Olea europaea
Os06g0332800 Oryza sativa ssp. japonica
Peaxi162Scf00157g01525 Petunia axillaris
Peaxi162Scf00256g00035 Petunia axillaris
PGR044G0105 Punica granatum
PGR142G2689 Punica granatum
Phvul.003G164500 Phaseolus vulgaris
Potri.018G028500 Populus trichocarpa
Potri.018G068300 Populus trichocarpa
Pp3c18_21980 Physcomitrium patens
Prupe.1G480000 Prunus persica
Prupe.7G243100 Prunus persica
Psat0s2233g0360 Pisum sativum
Psat4g040120 Pisum sativum
PSO170G5454 Papaver somniferum
PSO455G0045 Papaver somniferum
QL02p021910 Quercus lobata
QL10p023445 Quercus lobata
RcHm_v2.0_Chr2g0088401 Rosa chinensis
RcHm_v2.0_Chr6g0298061 Rosa chinensis
Rhsim01G0071100 Rhododendron simsii
RhsimUnG0194700 Rhododendron simsii
Sabra18G0030700 Salix brachista
Sabra18G0060200 Salix brachista
SalBow1G5494 Salvia bowleyana
Sed0005083 Sechium edule
Sed0007274 Sechium edule
SEGI_36836 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06124 Striga asiatica
SGA_v2.0_scaffold17G08031 Striga asiatica
SMO145G0190 Selaginella moellendorffii
Solyc12g009440.2 Solanum lycopersicum
Sopen12g004440 Solanum pennellii
Sp5g14270 Schrenkiella parvula
TAR625G0117 Trochodendron aralioides
TAR636G0369 Trochodendron aralioides
TAR645G0004 Trochodendron aralioides
THA.LOC104808988 Tarenaya hassleriana
THA.LOC104815279 Tarenaya hassleriana
Thecc.09G026400 Theobroma cacao
Thecc.09G126600 Theobroma cacao
Thhalv10010812m.g Eutrema salsugineum
TPR.G10724 Trifolium pratense
TPR.G3106 Trifolium pratense
TWI34G1168 Tripterygium wilfordii
TWI63G0509 Tripterygium wilfordii
unitig_26.g9662 Utricularia gibba
vmacro20557 Vaccinium macrocarpon
vmacro23102 Vaccinium macrocarpon
VMungo1215G2386 Vigna mungo
VMungo1309G0037 Vigna mungo
Zm00001eb029690 Zea mays

User provided reference genes

Program Settings