Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p34950 Brassica napus
A05p00440 Brassica napus
A07p26020 Brassica napus
A09p54520 Brassica napus
Aa31LG10G16460 Aethionema arabicum
Aa31LG1G28790 Aethionema arabicum
AL4G47050 Arabidopsis lyrata
AL5G45400 Arabidopsis lyrata
Aqoxy2G02834 Aquilegia oxysepala
Aqoxy5G00808 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.VI73GY Arachis hypogaea
AT2G47485 Arabidopsis thaliana
AT3G62650 Arabidopsis thaliana
ATR0053G052 Amborella trichopoda
ATR0706G120 Amborella trichopoda
Atru.chr5.1067 Acer truncatum
AUR62008739 Chenopodium quinoa
AUR62025498 Chenopodium quinoa
BcaB02g07332 Brassica carinata
BcaB02g08109 Brassica carinata
BcaB02g08767 Brassica carinata
BcaB06g29439 Brassica carinata
BcaC02g06977 Brassica carinata
BcaC07g40741 Brassica carinata
BcaC07g40776 Brassica carinata
BcaC08g45208 Brassica carinata
BcaC08g45209 Brassica carinata
BolC4t21684H Brassica oleracea
BolC4t28764H Brassica oleracea
BolC6t38003H Brassica oleracea
BolC8t51321H Brassica oleracea
BraA05t19042Z Brassica rapa
BraA07t30250Z Brassica rapa
BraA09t40864Z Brassica rapa
BraSC79t46685Z Brassica rapa
C04p00390 Brassica napus
C04p72830 Brassica napus
C06p28320 Brassica napus
C08p37400 Brassica napus
CAN.G668.31 Capsicum annuum
CANSAT25G0832 Cannabis sativa
CARHR142880 Cardamine hirsuta
CARHR172920 Cardamine hirsuta
Carub.0004s3022 Capsella rubella
Carub.0005s2931 Capsella rubella
Ca_10307_v3 Cicer arietinum L.
Ca_29579_v3 Cicer arietinum L.
Cc01_g04570 Coffea canephora
Cc01_g21210 Coffea canephora
Cfa005855 Carpinus fangiana
Ciclev10022679m.g Citrus clementina
CiPaw.07G113900 Carya illinoinensis
CiPaw.08G092200 Carya illinoinensis
ClCG09G005350 Citrullus lanatus
ClCG10G011190 Citrullus lanatus
COL.COLO4_23282 Corchorus olitorius
Cpa.g.sc151.47 Carica papaya
CsaV3_4G001080 Cucumis sativus L.
CsaV3_7G029720 Cucumis sativus L.
CSS0011800 Camellia sinensis var. sinensis
CSS0040208 Camellia sinensis var. sinensis
DCAR_002866 Daucus carota
DCAR_005779 Daucus carota
Dinv10056 Davidia involucrata
Dinv33090 Davidia involucrata
Duzib133G0282 Durio zibethinus
Duzib138G1135 Durio zibethinus
Duzib211G0236 Durio zibethinus
ECA236G3228 Erigeron canadensis
ECA248G1804 Erigeron canadensis
EL10Ac7g17606 Beta vulgaris
Eucgr.H01074 Eucalyptus grandis
Eucgr.K03517 Eucalyptus grandis
FAN04G1108 Fragaria x ananassa
FAN08G2441 Fragaria x ananassa
FvH4_5g28940 Fragaria vesca
Glyma.02G015200 Glycine max
Glyma.03G217700 Glycine max
Glyma.10G015800 Glycine max
Glyma.19G214300 Glycine max
Gohir.A11G112000 Gossypium hirsutum
Gohir.A12G127800 Gossypium hirsutum
Gohir.D11G117100 Gossypium hirsutum
Gohir.D12G131300 Gossypium hirsutum
Gorai.007G125400 Gossypium raimondii
Gorai.008G142600 Gossypium raimondii
HanXRQChr01g0000901 Helianthus annuus
HanXRQChr04g0114591 Helianthus annuus
HanXRQChr04g0121431 Helianthus annuus
HanXRQChr10g0285441 Helianthus annuus
Haze_04994 Corylus avellana
Haze_04995 Corylus avellana
Hma1.2p1_0212F.1_g090160 Hydrangea macrophylla
Hma1.2p1_0494F.1_g165600 Hydrangea macrophylla
HPP92_006902 Vanilla planifolia
HPP92_025194 Vanilla planifolia
Lalb_Chr02g0146621 Lupinus albus
Lalb_Chr15g0078411 Lupinus albus
Lalb_Chr18g0046821 Lupinus albus
Lalb_Chr21g0309411 Lupinus albus
Lj1C21T4 Lonicera japonica
Lj1g0023980 Lotus japonicus
Lj2P1201T47 Lonicera japonica
Lj5g0005836 Lotus japonicus
Lsat_1_v5_gn_8_165720 Lactuca sativa
Lsat_1_v5_gn_9_601 Lactuca sativa
Manes.01G224100 Manihot esculenta
Mapoly0010s0032 Marchantia polymorpha
MBI18_g42974_MAGBIO Magnolia biondii
MBI18_g45029_MAGBIO Magnolia biondii
MD03G1298600 Malus domestica
Medtr1g087775 Medicago truncatula
Medtr7g109220 Medicago truncatula
MELO3C015948.2 Cucumis melo
MELO3C017929.2 Cucumis melo
Migut.D00112 Erythranthe guttata
Nitab4.5_0000116g0160 Nicotiana tabacum
Nitab4.5_0001544g0150 Nicotiana tabacum
Nitab4.5_0002454g0010 Nicotiana tabacum
Nitab4.5_0005587g0040 Nicotiana tabacum
Nn1g00442 Nelumbo nucifera
Nn1g06353 Nelumbo nucifera
Nn3g21602 Nelumbo nucifera
Nn4g25678 Nelumbo nucifera
Oeu006461.1 Olea europaea
Oeu008332.1 Olea europaea
Oeu011480.1 Olea europaea
Os01g0308600 Oryza sativa ssp. japonica
Peaxi162Scf00001g00294 Petunia axillaris
Peaxi162Scf00147g00094 Petunia axillaris
PGR044G0131 Punica granatum
PGR044G1489 Punica granatum
PGR119G1167 Punica granatum
PGSC0003DMG400007290 Solanum tuberosum
PGSC0003DMG400031841 Solanum tuberosum
Phvul.001G211200 Phaseolus vulgaris
Phvul.007G217000 Phaseolus vulgaris
Potri.002G200000 Populus trichocarpa
Potri.014G124900 Populus trichocarpa
Prupe.8G268600 Prunus persica
Psat3g020880 Pisum sativum
Psat3g124960 Pisum sativum
Psat6g162960 Pisum sativum
PSO063G5106 Papaver somniferum
PSO541G3234 Papaver somniferum
PSO675G3938 Papaver somniferum
QL12p028794 Quercus lobata
RcHm_v2.0_Chr7g0242001 Rosa chinensis
Rhsim01G0288700 Rhododendron simsii
Rhsim13G0007500 Rhododendron simsii
Rhsim13G0007600 Rhododendron simsii
Sabra02G0158400 Salix brachista
Sabra14G0092800 Salix brachista
Sabra16G0234100 Salix brachista
Sabra16G0234400 Salix brachista
Sc05g0003300 Simmondsia chinensis
Sc17g0003040 Simmondsia chinensis
Sed0002432 Sechium edule
Sed0005967 Sechium edule
Sed0025326 Sechium edule
SEGI_10792 Sequoiadendron giganteum
SEGI_14476 Sequoiadendron giganteum
SEGI_15387 Sequoiadendron giganteum
SEGI_21943 Sequoiadendron giganteum
SEGI_27005 Sequoiadendron giganteum
SGA_v2.0_scaffold334G49044 Striga asiatica
SGA_v2.0_scaffold376G50256 Striga asiatica
Solyc06g009770.1 Solanum lycopersicum
Solyc09g075570.1 Solanum lycopersicum
Sopen06g004400 Solanum pennellii
Sopen09g030370 Solanum pennellii
Sp4g29420 Schrenkiella parvula
Sp5g00860 Schrenkiella parvula
TAR362G0595 Trochodendron aralioides
TAR365G1145 Trochodendron aralioides
TAR633G2691 Trochodendron aralioides
TAR636G2223 Trochodendron aralioides
THA.LOC104802191 Tarenaya hassleriana
THA.LOC104817473 Tarenaya hassleriana
Thecc.01G308200 Theobroma cacao
Thhalv10001673m.g Eutrema salsugineum
Thhalv10006300m.g Eutrema salsugineum
TPR.G19765 Trifolium pratense
TWI18G0446 Tripterygium wilfordii
TWI36G0365 Tripterygium wilfordii
unitig_0.g272 Utricularia gibba
unitig_578.g16622 Utricularia gibba
VMungo0720G2108 Vigna mungo
VMungo1383G3047 Vigna mungo
Zm00001eb130390 Zea mays
Zm00001eb285880 Zea mays
Zm00001eb339950 Zea mays
Zm00001eb339960 Zea mays

User provided reference genes

Program Settings