Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia08370 Actinidia chinensis
Actinidia23946 Actinidia chinensis
Actinidia26460 Actinidia chinensis
Actinidia31482 Actinidia chinensis
Actinidia34400 Actinidia chinensis
Ah.08g219410 Amaranthus hybridus
AL6G11680 Arabidopsis lyrata
Aqoxy2G02103 Aquilegia oxysepala
Aqoxy4G02910 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0C4VVF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6Q00VM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8UVC92 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.95G3UD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QWF1SC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QZ6FSS Arachis hypogaea
AT5G02440 Arabidopsis thaliana
ATR0559G115 Amborella trichopoda
ATR0680G191 Amborella trichopoda
Atru.chr3.3890 Acer truncatum
Atru.chr3.3891 Acer truncatum
Atru.chr8.1961 Acer truncatum
AUR62001798 Chenopodium quinoa
AUR62009585 Chenopodium quinoa
BolC2t06046H Brassica oleracea
C02p00460 Brassica napus
CAN.G327.10 Capsicum annuum
CANSAT35G0216 Cannabis sativa
CARHR210970 Cardamine hirsuta
Carub.0006s0124 Capsella rubella
Ca_12948_v3 Cicer arietinum L.
Ca_26083_v3 Cicer arietinum L.
Cc06_g02720 Coffea canephora
CDE02G3270 Ceratophyllum demersum
CDE08G1604 Ceratophyllum demersum
Ciclev10012740m.g Citrus clementina
Ciclev10029234m.g Citrus clementina
CiPaw.09G191600 Carya illinoinensis
CiPaw.10G145200 Carya illinoinensis
CiPaw.13G095400 Carya illinoinensis
ClCG02G020230 Citrullus lanatus
ClCG04G008250 Citrullus lanatus
ClCG10G021090 Citrullus lanatus
COL.COLO4_14818 Corchorus olitorius
COL.COLO4_18499 Corchorus olitorius
Cpa.g.sc81.162 Carica papaya
CsaV3_3G034940 Cucumis sativus L.
CsaV3_4G024920 Cucumis sativus L.
CsaV3_6G016930 Cucumis sativus L.
CSS0027996 Camellia sinensis var. sinensis
CSS0030599 Camellia sinensis var. sinensis
CSS0044295 Camellia sinensis var. sinensis
DCAR_005975 Daucus carota
Dinv12411 Davidia involucrata
Dinv16990 Davidia involucrata
Dinv35615 Davidia involucrata
Dinv37181 Davidia involucrata
Dinv42939 Davidia involucrata
Dinv43161 Davidia involucrata
Duzib093G1072 Durio zibethinus
Duzib128G0537 Durio zibethinus
Duzib168G1608 Durio zibethinus
Duzib170G0558 Durio zibethinus
ECA236G2982 Erigeron canadensis
ECA247G3528 Erigeron canadensis
EL10Ac7g16007 Beta vulgaris
Eucgr.J02057 Eucalyptus grandis
Eucgr.K03143 Eucalyptus grandis
FAN02G4097 Fragaria x ananassa
FAN05G0377 Fragaria x ananassa
FAN09G0639 Fragaria x ananassa
FAN09G3248 Fragaria x ananassa
FAN11G1093 Fragaria x ananassa
FAN14G4675 Fragaria x ananassa
FAN16G0579 Fragaria x ananassa
FAN21G2526 Fragaria x ananassa
FAN25G2547 Fragaria x ananassa
FvH4_3g35940 Fragaria vesca
FvH4_6g13980 Fragaria vesca
Glyma.03G082900 Glycine max
Glyma.08G358400 Glycine max
Glyma.13G335402 Glycine max
Glyma.15G039000 Glycine max
Glyma.18G176700 Glycine max
Gohir.A05G096000 Gossypium hirsutum
Gohir.A07G097950 Gossypium hirsutum
Gohir.A11G326600 Gossypium hirsutum
Gohir.D05G096200 Gossypium hirsutum
Gohir.D07G102300 Gossypium hirsutum
Gohir.D11G345500 Gossypium hirsutum
Gorai.001G110200 Gossypium raimondii
Gorai.009G099700 Gossypium raimondii
GSVIVG01024982001 Vitis vinifera
GSVIVG01034186001 Vitis vinifera
HanXRQChr05g0134511 Helianthus annuus
HanXRQChr08g0234711 Helianthus annuus
Haze_20770 Corylus avellana
Haze_24084 Corylus avellana
Hma1.2p1_1513F.1_g288070 Hydrangea macrophylla
Hund04968 Selenicereus undatus
Hund18916 Selenicereus undatus
Lalb_Chr03g0035091 Lupinus albus
Lalb_Chr03g0042111 Lupinus albus
Lalb_Chr07g0193911 Lupinus albus
Lalb_Chr07g0193921 Lupinus albus
Lalb_Chr13g0291181 Lupinus albus
Lalb_Chr13g0291191 Lupinus albus
Lj2A96T67 Lonicera japonica
Lj3g0018686 Lotus japonicus
LjContig00564g0015687 Lotus japonicus
Lsat_1_v5_gn_8_75920 Lactuca sativa
Lsat_1_v5_gn_9_23221 Lactuca sativa
Manes.04G034300 Manihot esculenta
Manes.08G081800 Manihot esculenta
Manes.09G089700 Manihot esculenta
Manes.11G131300 Manihot esculenta
MBI05_g30238_MAGBIO Magnolia biondii
MBI14_g37823_MAGBIO Magnolia biondii
MD03G1096000 Malus domestica
MD04G1126900 Malus domestica
MD04G1127100 Malus domestica
MD11G1110500 Malus domestica
Medtr2g096780 Medicago truncatula
Medtr4g021875 Medicago truncatula
Medtr7g059410 Medicago truncatula
MELO3C003124.2 Cucumis melo
MELO3C009262.2 Cucumis melo
MELO3C025924.2 Cucumis melo
Migut.J00336 Erythranthe guttata
MSTRG.19089 Avicennia marina
MSTRG.5670 Avicennia marina
Nitab4.5_0001800g0180 Nicotiana tabacum
Nitab4.5_0007604g0010 Nicotiana tabacum
Nn2g10383 Nelumbo nucifera
Nn5g26928 Nelumbo nucifera
Oeu011402.1 Olea europaea
Oeu024354.1 Olea europaea
Peaxi162Scf00165g01520 Petunia axillaris
Peaxi162Scf00832g00018 Petunia axillaris
PGR004G1376 Punica granatum
PGR102G2755 Punica granatum
PGSC0003DMG400000395 Solanum tuberosum
Phvul.008G099800 Phaseolus vulgaris
Phvul.010G013400 Phaseolus vulgaris
Phvul.L004843 Phaseolus vulgaris
Potri.001G238900 Populus trichocarpa
Potri.006G084400 Populus trichocarpa
Potri.009G030100 Populus trichocarpa
Prupe.6G079000 Prunus persica
Prupe.6G253600 Prunus persica
Psat0s4138g0040 Pisum sativum
Psat7g236840 Pisum sativum
PSO151G0026 Papaver somniferum
PSO339G2088 Papaver somniferum
PSO339G4025 Papaver somniferum
PSO384G3887 Papaver somniferum
QL01p032299 Quercus lobata
QL07p048124 Quercus lobata
RcHm_v2.0_Chr2g0141581 Rosa chinensis
RcHm_v2.0_Chr3g0466801 Rosa chinensis
RcHm_v2.0_Chr5g0064221 Rosa chinensis
Rhsim05G0191500 Rhododendron simsii
Rhsim13G0083400 Rhododendron simsii
Sabra09G0021000 Salix brachista
Sabra16G0144000 Salix brachista
SalBow3G4662 Salvia bowleyana
Sc01g0004200 Simmondsia chinensis
Sc12g0001550 Simmondsia chinensis
Sc20g0003780 Simmondsia chinensis
Sed0011659 Sechium edule
Sed0026502 Sechium edule
Sed0028236 Sechium edule
SEGI_38129 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33793 Striga asiatica
Solyc11g066010.2 Solanum lycopersicum
Sopen09g005410 Solanum pennellii
Sopen11g025750 Solanum pennellii
TAR623G1457 Trochodendron aralioides
TAR633G1470 Trochodendron aralioides
TAR636G1653 Trochodendron aralioides
THA.LOC104816278 Tarenaya hassleriana
Thecc.05G040900 Theobroma cacao
Thecc.09G322900 Theobroma cacao
Thhalv10014850m.g Eutrema salsugineum
TPR.G23255 Trifolium pratense
TPR.G34322 Trifolium pratense
TPR.G5587 Trifolium pratense
TWI31G0174 Tripterygium wilfordii
TWI74G0830 Tripterygium wilfordii
TWI79G0031 Tripterygium wilfordii
vmacro03078 Vaccinium macrocarpon
vmacro20143 Vaccinium macrocarpon
VMungo1080G1739 Vigna mungo
VMungo1383G0208 Vigna mungo

User provided reference genes

Program Settings