Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p12100 Brassica napus
Aa31LG9G16580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3241 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5734 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.722 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.232 Anthoceros agrestis
Actinidia01964 Actinidia chinensis
Actinidia01972 Actinidia chinensis
Ah.12g062520 Amaranthus hybridus
AL7G50920 Arabidopsis lyrata
Aqoxy3G03552 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0J6LH7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3ST4SV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BNNE9K Arachis hypogaea
AT5G39410 Arabidopsis thaliana
ATR0111G016 Amborella trichopoda
Atru.chr2.2165 Acer truncatum
Atru.chr2.3146 Acer truncatum
AUR62018134 Chenopodium quinoa
AUR62034468 Chenopodium quinoa
AUR62034473 Chenopodium quinoa
BcaB06g27298 Brassica carinata
BcaB06g27324 Brassica carinata
BolC4t26158H Brassica oleracea
BraA04t16875Z Brassica rapa
C04p45730 Brassica napus
CAN.G206.192 Capsicum annuum
CAN.G206.193 Capsicum annuum
CARHR262950 Cardamine hirsuta
Carub.0007s3653 Capsella rubella
Ca_04330_v3 Cicer arietinum L.
Ca_04865_v3 Cicer arietinum L.
Cc07_g03810 Coffea canephora
CDE04G1400 Ceratophyllum demersum
Cfa007618 Carpinus fangiana
Cfa022187 Carpinus fangiana
Ciclev10011701m.g Citrus clementina
CiPaw.03G092000 Carya illinoinensis
ClCG10G015450 Citrullus lanatus
ClCG10G015460 Citrullus lanatus
COL.COLO4_12253 Corchorus olitorius
COL.COLO4_12254 Corchorus olitorius
Cpa.g.sc14.137 Carica papaya
Cre06.g277100 Chlamydomonas reinhardtii
Cre16.g678325 Chlamydomonas reinhardtii
CsaV3_3G041010 Cucumis sativus L.
CsaV3_3G041020 Cucumis sativus L.
CsaV3_3G041030 Cucumis sativus L.
CSS0008212 Camellia sinensis var. sinensis
CSS0008989 Camellia sinensis var. sinensis
DCAR_011066 Daucus carota
Dinv11492 Davidia involucrata
Duzib264G1026 Durio zibethinus
ECA238G0029 Erigeron canadensis
ECA238G1443 Erigeron canadensis
ECA238G2285 Erigeron canadensis
EL10Ac2g03040 Beta vulgaris
Eucgr.J01366 Eucalyptus grandis
FAN02G2126 Fragaria x ananassa
FAN05G1936 Fragaria x ananassa
FAN05G5016 Fragaria x ananassa
FAN09G4649 Fragaria x ananassa
FAN14G0784 Fragaria x ananassa
FAN14G1659 Fragaria x ananassa
FAN14G3818 Fragaria x ananassa
FvH4_6g47610 Fragaria vesca
FvH4_6g47650 Fragaria vesca
FvH4_6g47700 Fragaria vesca
Glyma.08G241300 Glycine max
Glyma.13G059300 Glycine max
Gohir.A05G369500 Gossypium hirsutum
Gohir.D04G045800 Gossypium hirsutum
Gorai.012G051000 Gossypium raimondii
GSVIVG01011482001 Vitis vinifera
HanXRQChr14g0448661 Helianthus annuus
HanXRQChr14g0448671 Helianthus annuus
HanXRQChr14g0448681 Helianthus annuus
HanXRQChr17g0546731 Helianthus annuus
HanXRQChr17g0546741 Helianthus annuus
Haze_14476 Corylus avellana
Hma1.2p1_0255F.1_g103250 Hydrangea macrophylla
HPP92_020419 Vanilla planifolia
HPP92_023623 Vanilla planifolia
HPP92_023641 Vanilla planifolia
Hund15565 Selenicereus undatus
Lalb_Chr02g0159071 Lupinus albus
Lalb_Chr17g0337081 Lupinus albus
Lalb_Chr17g0337111 Lupinus albus
Lj1g0021677 Lotus japonicus
Lj2g0008898 Lotus japonicus
Lj4A115T83 Lonicera japonica
Lj4C115T4 Lonicera japonica
Lsat_1_v5_gn_2_87981 Lactuca sativa
Lsat_1_v5_gn_2_88001 Lactuca sativa
Lsat_1_v5_gn_2_88041 Lactuca sativa
Lsat_1_v5_gn_3_33981 Lactuca sativa
Lsat_1_v5_gn_3_88480 Lactuca sativa
Lsat_1_v5_gn_4_58340 Lactuca sativa
Lsat_1_v5_gn_4_89441 Lactuca sativa
Lsat_1_v5_gn_7_15281 Lactuca sativa
Manes.01G099500 Manihot esculenta
Mapoly0061s0022 Marchantia polymorpha
MBI19_g41331_MAGBIO Magnolia biondii
MCO09G694 Micromonas commoda
MCO12G151 Micromonas commoda
MCO13G548 Micromonas commoda
MCO15G445 Micromonas commoda
MD09G1060600 Malus domestica
Medtr4g094268 Medicago truncatula
Medtr5g064760 Medicago truncatula
Medtr7g011890 Medicago truncatula
MELO3C009835.2 Cucumis melo
MELO3C009836.2 Cucumis melo
Migut.H00662 Erythranthe guttata
MSTRG.23906 Avicennia marina
MSTRG.3024 Avicennia marina
Nitab4.5_0000053g0020 Nicotiana tabacum
Nitab4.5_0000565g0040 Nicotiana tabacum
Nitab4.5_0000565g0050 Nicotiana tabacum
Nitab4.5_0003216g0010 Nicotiana tabacum
Nitab4.5_0008573g0020 Nicotiana tabacum
Nitab4.5_0008573g0050 Nicotiana tabacum
Nn4g23324 Nelumbo nucifera
Nn4g23325 Nelumbo nucifera
Nn4g23326 Nelumbo nucifera
Nn4g23327 Nelumbo nucifera
Os07g0597100 Oryza sativa ssp. japonica
Peaxi162Scf00166g00944 Petunia axillaris
PGR056G0004 Punica granatum
PGSC0003DMG400001348 Solanum tuberosum
PGSC0003DMG400001349 Solanum tuberosum
PGSC0003DMG401001347 Solanum tuberosum
PGSC0003DMG402001347 Solanum tuberosum
Phvul.004G033000 Phaseolus vulgaris
Phvul.008G040100 Phaseolus vulgaris
Potri.004G126100 Populus trichocarpa
Pp3c2_35640 Physcomitrium patens
Pp3c7_23970 Physcomitrium patens
PRCOL_00005991 Prasinoderma coloniale
Prupe.3G260300 Prunus persica
Psat0s4061g0240 Pisum sativum
Psat1g069160 Pisum sativum
Psat1g105320 Pisum sativum
Psat1g105360 Pisum sativum
Psat3g198560 Pisum sativum
Psat3g198720 Pisum sativum
Psat7g019480 Pisum sativum
PSO541G0811 Papaver somniferum
PSO675G4642 Papaver somniferum
QL02p039347 Quercus lobata
RcHm_v2.0_Chr2g0166731 Rosa chinensis
RcHm_v2.0_Chr2g0166761 Rosa chinensis
RcHm_v2.0_Chr2g0166771 Rosa chinensis
RcHm_v2.0_Chr4g0415081 Rosa chinensis
RcHm_v2.0_Chr4g0415091 Rosa chinensis
RcHm_v2.0_Chr4g0415101 Rosa chinensis
Rhsim10G0034300 Rhododendron simsii
Sabra04G0066900 Salix brachista
SalBow1G1268 Salvia bowleyana
SalBow1G1829 Salvia bowleyana
SalBow1G7281 Salvia bowleyana
SalBow1G7636 Salvia bowleyana
SalBow1G7786 Salvia bowleyana
SalBow8G2541 Salvia bowleyana
Sc14g0006110 Simmondsia chinensis
Sed0002556 Sechium edule
Sed0012723 Sechium edule
SEGI_01701 Sequoiadendron giganteum
SEGI_03289 Sequoiadendron giganteum
SEGI_25923 Sequoiadendron giganteum
SEGI_26660 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02421 Striga asiatica
SMO364G0897 Selaginella moellendorffii
SMO364G0931 Selaginella moellendorffii
Solyc02g088490.3 Solanum lycopersicum
Solyc02g088510.4 Solanum lycopersicum
Sopen02g033200 Solanum pennellii
Sopen02g033240 Solanum pennellii
Sp7g02570 Schrenkiella parvula
TAR371G0601 Trochodendron aralioides
TAR371G1088 Trochodendron aralioides
TAR371G1100 Trochodendron aralioides
THA.LOC104823897 Tarenaya hassleriana
Thecc.04G089600 Theobroma cacao
Thhalv10027760m.g Eutrema salsugineum
TPR.G26192 Trifolium pratense
TPR.G33465 Trifolium pratense
TWI34G0121 Tripterygium wilfordii
TWI34G1153 Tripterygium wilfordii
unitig_744.g24003 Utricularia gibba
vmacro05670 Vaccinium macrocarpon
VMungo0464G1139 Vigna mungo
VMungo1383G2485 Vigna mungo
Zm00001eb326640 Zea mays

User provided reference genes

Program Settings