Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09160 Brassica napus
A03p58400 Brassica napus
A07p00460 Brassica napus
A08p19920 Brassica napus
Aa31LG2G21620 Aethionema arabicum
Aa31LG8G17250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4760 Anthoceros agrestis
Actinidia30108 Actinidia chinensis
Actinidia37567 Actinidia chinensis
Ah.08g213830 Amaranthus hybridus
Ah.15g093440 Amaranthus hybridus
AL3G47830 Arabidopsis lyrata
AL7G23750 Arabidopsis lyrata
Aqoxy5G00078 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.110G34 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DHZ2RQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HB1P9N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PI6GK2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QW0L8Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TN6DUA Arachis hypogaea
AT2G20260 Arabidopsis thaliana
AT4G28750 Arabidopsis thaliana
ATR0787G081 Amborella trichopoda
Atru.chr5.1920 Acer truncatum
AUR62008851 Chenopodium quinoa
AUR62025395 Chenopodium quinoa
BcaB03g12587 Brassica carinata
BcaC06g32605 Brassica carinata
BcaC07g38359 Brassica carinata
BcaNung01368 Brassica carinata
BcaNung07172 Brassica carinata
BolC1t01034H Brassica oleracea
BolC8t48776H Brassica oleracea
BraA01t00862Z Brassica rapa
BraA08t33949Z Brassica rapa
C01p10750 Brassica napus
C07p56420 Brassica napus
C08p11070 Brassica napus
CAN.G311.8 Capsicum annuum
CAN.G771.48 Capsicum annuum
CANSAT01G3044 Cannabis sativa
CARHR110760 Cardamine hirsuta
CARHR236540 Cardamine hirsuta
Carub.0003s3459 Capsella rubella
Carub.0007s1189 Capsella rubella
Ca_08765_v3 Cicer arietinum L.
Ca_09628_v3 Cicer arietinum L.
CBR_g17684 Chara braunii
Cc01_g17500 Coffea canephora
CDE02G1659 Ceratophyllum demersum
CDE09G0441 Ceratophyllum demersum
Cfa002510 Carpinus fangiana
Ciclev10022750m.g Citrus clementina
CiPaw.03G273300 Carya illinoinensis
CiPaw.04G192200 Carya illinoinensis
ClCG11G010230 Citrullus lanatus
COL.COLO4_07003 Corchorus olitorius
COL.COLO4_36321 Corchorus olitorius
Cpa.g.sc8.213 Carica papaya
Cre10.g420350 Chlamydomonas reinhardtii
CsaV3_2G010090 Cucumis sativus L.
CSS0026330 Camellia sinensis var. sinensis
CSS0050291 Camellia sinensis var. sinensis
DCAR_012618 Daucus carota
DCAR_018535 Daucus carota
Dinv19249 Davidia involucrata
Dinv43039 Davidia involucrata
Duzib133G0561 Durio zibethinus
Duzib138G0098 Durio zibethinus
Duzib211G0535 Durio zibethinus
ECA236G1700 Erigeron canadensis
ECA247G0853 Erigeron canadensis
EL10Ac7g17751 Beta vulgaris
Eucgr.B02162 Eucalyptus grandis
Eucgr.H00828 Eucalyptus grandis
FAN15G0220 Fragaria x ananassa
FAN24G0321 Fragaria x ananassa
FAN27G0931 Fragaria x ananassa
FvH4_2g19960 Fragaria vesca
Glyma.10G042000 Glycine max
Glyma.10G042100 Glycine max
Glyma.13G129400 Glycine max
Glyma.13G129500 Glycine max
Gohir.A07G202600 Gossypium hirsutum
Gohir.A08G046200 Gossypium hirsutum
Gohir.A11G135000 Gossypium hirsutum
Gohir.D07G208800 Gossypium hirsutum
Gohir.D08G056700 Gossypium hirsutum
Gohir.D11G141200 Gossypium hirsutum
Gorai.001G235800 Gossypium raimondii
Gorai.004G057800 Gossypium raimondii
Gorai.007G151500 Gossypium raimondii
GSVIVG01028481001 Vitis vinifera
HanXRQChr01g0014791 Helianthus annuus
HanXRQChr10g0287201 Helianthus annuus
HanXRQChr11g0327281 Helianthus annuus
HanXRQChr13g0408961 Helianthus annuus
HanXRQChr15g0468101 Helianthus annuus
Haze_24736 Corylus avellana
Hma1.2p1_0123F.1_g058160 Hydrangea macrophylla
Hma1.2p1_1393F.1_g280270 Hydrangea macrophylla
HPP92_027295 Vanilla planifolia
Hund18341 Selenicereus undatus
Hund21755 Selenicereus undatus
Lalb_Chr02g0152921 Lupinus albus
Lalb_Chr06g0170911 Lupinus albus
Lalb_Chr21g0314191 Lupinus albus
Lalb_Chr25g0289731 Lupinus albus
Lj5g0026666 Lotus japonicus
Lsat_1_v5_gn_2_15600 Lactuca sativa
Lsat_1_v5_gn_5_179160 Lactuca sativa
Lsat_1_v5_gn_8_90440 Lactuca sativa
Lsat_1_v5_gn_9_12001 Lactuca sativa
Manes.12G040000 Manihot esculenta
Manes.13G042400 Manihot esculenta
Mapoly0061s0118 Marchantia polymorpha
MBI07_g08920_MAGBIO Magnolia biondii
MCO05G318 Micromonas commoda
MD05G1183900 Malus domestica
MD10G1171800 Malus domestica
Medtr1g069235 Medicago truncatula
Medtr7g099390 Medicago truncatula
MELO3C008663.2 Cucumis melo
Migut.D00498 Erythranthe guttata
Migut.N02242 Erythranthe guttata
MSTRG.21447 Avicennia marina
Nitab4.5_0000385g0230 Nicotiana tabacum
Nitab4.5_0001557g0070 Nicotiana tabacum
Nitab4.5_0004333g0020 Nicotiana tabacum
Nitab4.5_0004777g0040 Nicotiana tabacum
Nn1g03078 Nelumbo nucifera
Nn3g19853 Nelumbo nucifera
Oeu017338.1 Olea europaea
Oeu026192.1 Olea europaea
Oeu039643.2 Olea europaea
Oeu047197.1 Olea europaea
Os07g0435300 Oryza sativa ssp. japonica
Peaxi162Scf00043g00067 Petunia axillaris
Peaxi162Scf00517g00118 Petunia axillaris
PGR142G3520 Punica granatum
PGSC0003DMG400020154 Solanum tuberosum
PGSC0003DMG400022022 Solanum tuberosum
Phvul.007G155500 Phaseolus vulgaris
Phvul.008G133700 Phaseolus vulgaris
Potri.002G253800 Populus trichocarpa
Pp3c20_640 Physcomitrium patens
Pp3c23_22230 Physcomitrium patens
Pp3c24_20960 Physcomitrium patens
PRCOL_00005723 Prasinoderma coloniale
Prupe.2G015600 Prunus persica
Prupe.8G210000 Prunus persica
Psat6g065160 Pisum sativum
PSO764G0144 Papaver somniferum
PSO832G4467 Papaver somniferum
QL09p043416 Quercus lobata
RcHm_v2.0_Chr6g0285621 Rosa chinensis
Rhsim05G0169700 Rhododendron simsii
Rhsim13G0041600 Rhododendron simsii
Sabra02G0192900 Salix brachista
SalBow6G4606 Salvia bowleyana
Sed0000934 Sechium edule
Sed0015250 Sechium edule
SEGI_17443 Sequoiadendron giganteum
SGA_v2.0_scaffold1464G53955 Striga asiatica
SGA_v2.0_scaffold1G00682 Striga asiatica
SMO201G0191 Selaginella moellendorffii
Solyc06g083680.3 Solanum lycopersicum
Solyc09g063130.3 Solanum lycopersicum
Sopen06g035100 Solanum pennellii
Sopen09g025300 Solanum pennellii
Sp3g33490 Schrenkiella parvula
Sp7g26760 Schrenkiella parvula
TAR362G0114 Trochodendron aralioides
TAR365G0283 Trochodendron aralioides
THA.LOC104804030 Tarenaya hassleriana
THA.LOC104814542 Tarenaya hassleriana
THA.LOC104820062 Tarenaya hassleriana
Thecc.01G245400 Theobroma cacao
Thecc.05G265600 Theobroma cacao
Thhalv10002106m.g Eutrema salsugineum
Thhalv10026332m.g Eutrema salsugineum
TPR.G20608 Trifolium pratense
TWI23G0432 Tripterygium wilfordii
TWI32G0368 Tripterygium wilfordii
TWI34G1801 Tripterygium wilfordii
TWI59G0010 Tripterygium wilfordii
unitig_22.g6316 Utricularia gibba
unitig_699.g19325 Utricularia gibba
unitig_85.g27272 Utricularia gibba
vmacro02722 Vaccinium macrocarpon
vmacro19972 Vaccinium macrocarpon
VMungo0720G2276 Vigna mungo
Zm00001eb096870 Zea mays
Zm00001eb306070 Zea mays

User provided reference genes

Program Settings