Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04170 Brassica napus
Aa31LG2G16810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4245 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4246 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4258 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4259 Anthoceros agrestis
Actinidia34394 Actinidia chinensis
Ah.01g010970 Amaranthus hybridus
AL7G17030 Arabidopsis lyrata
Aqoxy6G02835 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LFSR1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VN0KJM Arachis hypogaea
AT4G34260 Arabidopsis thaliana
ATR0205G005 Amborella trichopoda
ATR0661G369 Amborella trichopoda
Atru.chr5.2448 Acer truncatum
Atru.chr5.2453 Acer truncatum
Atru.chr5.2454 Acer truncatum
Atru.chr5.2456 Acer truncatum
AUR62010328 Chenopodium quinoa
AUR62010329 Chenopodium quinoa
AUR62039057 Chenopodium quinoa
AUR62039058 Chenopodium quinoa
BcaNung04164 Brassica carinata
BcaNung04986 Brassica carinata
BolC1t00439H Brassica oleracea
BraA01t00406Z Brassica rapa
C01p04540 Brassica napus
CANSAT25G1711 Cannabis sativa
CARHR242530 Cardamine hirsuta
Carub.0007s0611 Capsella rubella
Ca_11061_v3 Cicer arietinum L.
Cc02_g19400 Coffea canephora
CDE06G2550 Ceratophyllum demersum
Cfa004603 Carpinus fangiana
Cfa004604 Carpinus fangiana
Ciclev10027816m.g Citrus clementina
Ciclev10027838m.g Citrus clementina
CiPaw.05G013100 Carya illinoinensis
CiPaw.05G013200 Carya illinoinensis
ClCG05G010350 Citrullus lanatus
COL.COLO4_32573 Corchorus olitorius
COL.COLO4_32574 Corchorus olitorius
Cpa.g.sc106.113 Carica papaya
CsaV3_3G018140 Cucumis sativus L.
CSS0003612 Camellia sinensis var. sinensis
CSS0007308 Camellia sinensis var. sinensis
CSS0009203 Camellia sinensis var. sinensis
CSS0016029 Camellia sinensis var. sinensis
CSS0020018 Camellia sinensis var. sinensis
CSS0026771 Camellia sinensis var. sinensis
CSS0033371 Camellia sinensis var. sinensis
CSS0034894 Camellia sinensis var. sinensis
CSS0035504 Camellia sinensis var. sinensis
CSS0038772 Camellia sinensis var. sinensis
CSS0042293 Camellia sinensis var. sinensis
DCAR_001655 Daucus carota
DCAR_001656 Daucus carota
DCAR_001658 Daucus carota
DCAR_029092 Daucus carota
Dinv15773 Davidia involucrata
Dinv42203 Davidia involucrata
Duzib052G0193 Durio zibethinus
Duzib132G0449 Durio zibethinus
Duzib248G0534 Durio zibethinus
ECA234G0109 Erigeron canadensis
ECA240G1815 Erigeron canadensis
EL10Ac9g22257 Beta vulgaris
Eucgr.I01091 Eucalyptus grandis
Eucgr.I01092 Eucalyptus grandis
Eucgr.I01093 Eucalyptus grandis
FAN15G0970 Fragaria x ananassa
FAN15G2851 Fragaria x ananassa
FAN20G1862 Fragaria x ananassa
FAN24G0829 Fragaria x ananassa
FAN24G2294 Fragaria x ananassa
FAN24G3426 Fragaria x ananassa
FAN27G0709 Fragaria x ananassa
FvH4_2g04810 Fragaria vesca
FvH4_2g04870 Fragaria vesca
Glyma.01G243600 Glycine max
Glyma.04G111966 Glycine max
Glyma.10G260750 Glycine max
Glyma.10G260900 Glycine max
Glyma.20G130366 Glycine max
Glyma.20G130432 Glycine max
Gohir.A12G021350 Gossypium hirsutum
Gohir.A12G021400 Gossypium hirsutum
Gohir.D12G021700 Gossypium hirsutum
Gohir.D12G021900 Gossypium hirsutum
Gorai.008G022000 Gossypium raimondii
Gorai.008G022200 Gossypium raimondii
GSVIVG01037900001 Vitis vinifera
HanXRQChr09g0251071 Helianthus annuus
HanXRQChr10g0296941 Helianthus annuus
Haze_10199 Corylus avellana
Hma1.2p1_1518F.1_g288460 Hydrangea macrophylla
Hma1.2p1_1518F.1_g288470 Hydrangea macrophylla
HPP92_006064 Vanilla planifolia
Hund00157 Selenicereus undatus
Hund06308 Selenicereus undatus
Lalb_Chr06g0165351 Lupinus albus
Lj5A215G56 Lonicera japonica
Lj5A215G58 Lonicera japonica
Lj5C215G13 Lonicera japonica
Lj5C215T12 Lonicera japonica
Lj5g0008514 Lotus japonicus
Lj5g0016794 Lotus japonicus
Lsat_1_v5_gn_2_5441 Lactuca sativa
Lsat_1_v5_gn_5_116340 Lactuca sativa
Lsat_1_v5_gn_5_116360 Lactuca sativa
Lsat_1_v5_gn_9_111920 Lactuca sativa
Manes.07G068400 Manihot esculenta
Manes.10G075700 Manihot esculenta
Manes.10G075800 Manihot esculenta
Mapoly0115s0027 Marchantia polymorpha
MBI16_g09476_MAGBIO Magnolia biondii
MBI16_g16349_MAGBIO Magnolia biondii
MBI16_g33969_MAGBIO Magnolia biondii
MD10G1099200 Malus domestica
MD10G1099400 Malus domestica
MD10G1099600 Malus domestica
Medtr1g107135 Medicago truncatula
Medtr1g107145 Medicago truncatula
Medtr4g127370 Medicago truncatula
MELO3C019553.2 Cucumis melo
Migut.B00398 Erythranthe guttata
MSTRG.20193 Avicennia marina
Nitab4.5_0001480g0130 Nicotiana tabacum
Nitab4.5_0003699g0020 Nicotiana tabacum
Nn5g30453 Nelumbo nucifera
Oeu013759.1 Olea europaea
Oeu029532.2 Olea europaea
Oeu042151.1 Olea europaea
Os10g0339290 Oryza sativa ssp. japonica
Os10g0339600 Oryza sativa ssp. japonica
Peaxi162Scf00016g02427 Petunia axillaris
Peaxi162Scf00152g00326 Petunia axillaris
PGR142G0041 Punica granatum
PGR142G1515 Punica granatum
Phvul.002G053000 Phaseolus vulgaris
Phvul.007G041400 Phaseolus vulgaris
Potri.001G298900 Populus trichocarpa
Potri.001G299000 Populus trichocarpa
Potri.009G093500 Populus trichocarpa
Potri.009G093600 Populus trichocarpa
Potri.009G093900 Populus trichocarpa
Pp3c19_10350 Physcomitrium patens
Prupe.8G137300 Prunus persica
Psat6g217200 Pisum sativum
PSO541G1166 Papaver somniferum
QL11p032687 Quercus lobata
QL11p032729 Quercus lobata
RcHm_v2.0_Chr6g0254541 Rosa chinensis
RcHm_v2.0_Chr6g0254581 Rosa chinensis
Rhsim10G0162100 Rhododendron simsii
Rhsim10G0162400 Rhododendron simsii
Rhsim11G0156500 Rhododendron simsii
Rhsim11G0158000 Rhododendron simsii
Rhsim12G0174700 Rhododendron simsii
Sabra09G0072100 Salix brachista
Sabra09G0072200 Salix brachista
Sabra16G0187500 Salix brachista
Sabra16G0187700 Salix brachista
SalBow6G6056 Salvia bowleyana
Sc08g0001330 Simmondsia chinensis
Sed0017826 Sechium edule
Sed0023024 Sechium edule
SEGI_03881 Sequoiadendron giganteum
SEGI_08198 Sequoiadendron giganteum
SEGI_08298 Sequoiadendron giganteum
SEGI_24031 Sequoiadendron giganteum
SEGI_37563 Sequoiadendron giganteum
SEGI_38974 Sequoiadendron giganteum
SMO116G0225 Selaginella moellendorffii
Sp7g32040 Schrenkiella parvula
TAR365G0577 Trochodendron aralioides
TAR381G0463 Trochodendron aralioides
TAR381G0671 Trochodendron aralioides
THA.LOC104819550 Tarenaya hassleriana
Thecc.02G110900 Theobroma cacao
Thecc.02G111000 Theobroma cacao
Thhalv10024398m.g Eutrema salsugineum
TPR.G13230 Trifolium pratense
TPR.G19061 Trifolium pratense
TPR.G19062 Trifolium pratense
TWI75G1477 Tripterygium wilfordii
TWI79G1106 Tripterygium wilfordii
vmacro01992 Vaccinium macrocarpon
vmacro02524 Vaccinium macrocarpon
vmacro02525 Vaccinium macrocarpon
VMungo0720G0159 Vigna mungo
VMungo1215G0806 Vigna mungo
Zm00001eb027590 Zea mays

User provided reference genes

Program Settings