Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p32070 Brassica napus
A09p18480 Brassica napus
Aa31sc376G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2495 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2496 Anthoceros agrestis
Actinidia02892 Actinidia chinensis
Actinidia16662 Actinidia chinensis
Ah.01g017060 Amaranthus hybridus
Ah.02g127620 Amaranthus hybridus
AL1G49960 Arabidopsis lyrata
AL1G49980 Arabidopsis lyrata
AL1G50030 Arabidopsis lyrata
AL2G27110 Arabidopsis lyrata
Aqoxy1G03141 Aquilegia oxysepala
Aqoxy3G03956 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LKJ3D4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VLLQ8N Arachis hypogaea
AT1G35250 Arabidopsis thaliana
AT1G35290 Arabidopsis thaliana
AT1G68260 Arabidopsis thaliana
AT1G68280 Arabidopsis thaliana
ATR1125G078 Amborella trichopoda
Atru.chr11.132 Acer truncatum
AUR62002850 Chenopodium quinoa
AUR62022280 Chenopodium quinoa
AUR62022283 Chenopodium quinoa
AUR62023875 Chenopodium quinoa
AUR62034132 Chenopodium quinoa
AUR62034133 Chenopodium quinoa
AUR62034134 Chenopodium quinoa
AUR62037321 Chenopodium quinoa
AUR62044553 Chenopodium quinoa
AUR62044554 Chenopodium quinoa
AUR62044675 Chenopodium quinoa
BcaB02g07984 Brassica carinata
BcaB03g15105 Brassica carinata
BcaC04g22124 Brassica carinata
BcaC08g46259 Brassica carinata
BolC6t38878H Brassica oleracea
BolC9t55224H Brassica oleracea
BraA07t30837Z Brassica rapa
BraA07t31088Z Brassica rapa
C06p41720 Brassica napus
C09p23050 Brassica napus
CAN.G1052.1 Capsicum annuum
CANSAT01G1441 Cannabis sativa
CANSAT35G0765 Cannabis sativa
CANSAT35G1684 Cannabis sativa
CANSAT35G1707 Cannabis sativa
CARHR060960 Cardamine hirsuta
CARHR220110 Cardamine hirsuta
CARHR259050 Cardamine hirsuta
CARHR286260 Cardamine hirsuta
Carub.0001s3288 Capsella rubella
Carub.0001s3293 Capsella rubella
Carub.0001s3294 Capsella rubella
Carub.0002s1476 Capsella rubella
Ca_10364_v3 Cicer arietinum L.
Cc11_g09950 Coffea canephora
Ciclev10016740m.g Citrus clementina
CiPaw.05G239200 Carya illinoinensis
ClCG05G022600 Citrullus lanatus
COL.COLO4_04883 Corchorus olitorius
Cpa.g.sc65.42 Carica papaya
Cpa.g.sc65.43 Carica papaya
Cre04.g213761 Chlamydomonas reinhardtii
CsaV3_5G034440 Cucumis sativus L.
CSS0018626 Camellia sinensis var. sinensis
DCAR_007249 Daucus carota
DCAR_023651 Daucus carota
DCAR_026739 Daucus carota
Dinv21067 Davidia involucrata
Duzib248G1132 Durio zibethinus
ECA234G2589 Erigeron canadensis
ECA234G3856 Erigeron canadensis
ECA247G2097 Erigeron canadensis
EL10Ac6g14376 Beta vulgaris
Eucgr.B03007 Eucalyptus grandis
FAN12G0948 Fragaria x ananassa
FAN12G1645 Fragaria x ananassa
FAN12G2466 Fragaria x ananassa
FAN12G3824 Fragaria x ananassa
FAN17G2584 Fragaria x ananassa
FAN22G0292 Fragaria x ananassa
FvH4_4g27130 Fragaria vesca
FvH4_4g27160 Fragaria vesca
Glyma.01G080400 Glycine max
Gohir.A04G098000 Gossypium hirsutum
Gohir.A04G098050 Gossypium hirsutum
Gohir.A04G098100 Gossypium hirsutum
Gohir.D04G137800 Gossypium hirsutum
Gohir.D04G137825 Gossypium hirsutum
Gohir.D04G137850 Gossypium hirsutum
Gorai.012G122200 Gossypium raimondii
Gorai.012G122300 Gossypium raimondii
Gorai.012G122400 Gossypium raimondii
GSVIVG01011876001 Vitis vinifera
GSVIVG01011878001 Vitis vinifera
HanXRQChr03g0078631 Helianthus annuus
HanXRQChr07g0187571 Helianthus annuus
HanXRQChr10g0288901 Helianthus annuus
HanXRQChr10g0296841 Helianthus annuus
HanXRQChr10g0300041 Helianthus annuus
HanXRQChr16g0529461 Helianthus annuus
Haze_00607 Corylus avellana
Haze_00608 Corylus avellana
Hma1.2p1_0061F.1_g033710 Hydrangea macrophylla
HPP92_015110 Vanilla planifolia
HPP92_015116 Vanilla planifolia
Hund25056 Selenicereus undatus
Lalb_Chr04g0254661 Lupinus albus
Lalb_Chr04g0254671 Lupinus albus
Lj2g0023320 Lotus japonicus
Lj3A1013T42 Lonicera japonica
Lj7P525T18 Lonicera japonica
Lsat_1_v5_gn_4_15820 Lactuca sativa
Lsat_1_v5_gn_5_163161 Lactuca sativa
Manes.14G104000 Manihot esculenta
Mapoly0104s0006 Marchantia polymorpha
MD16G1041000 Malus domestica
Medtr5g056230 Medicago truncatula
Medtr5g056300 Medicago truncatula
Medtr5g056390 Medicago truncatula
MELO3C012259.2 Cucumis melo
MELO3C012260.2 Cucumis melo
Migut.E00355 Erythranthe guttata
Migut.H02048 Erythranthe guttata
Migut.M00674 Erythranthe guttata
Migut.M00675 Erythranthe guttata
MSTRG.13540 Avicennia marina
Nitab4.5_0000057g0210 Nicotiana tabacum
Nitab4.5_0007398g0020 Nicotiana tabacum
Nn4g23884 Nelumbo nucifera
Oeu059502.1 Olea europaea
Os02g0659700 Oryza sativa ssp. japonica
Os02g0660800 Oryza sativa ssp. japonica
Os04g0553300 Oryza sativa ssp. japonica
Peaxi162Scf00564g00029 Petunia axillaris
PGR102G3338 Punica granatum
PGSC0003DMG400005981 Solanum tuberosum
PGSC0003DMG400007750 Solanum tuberosum
PGSC0003DMG401015879 Solanum tuberosum
PGSC0003DMG402015879 Solanum tuberosum
Phvul.003G030100 Phaseolus vulgaris
Potri.010G123102 Populus trichocarpa
Prupe.1G313100 Prunus persica
Psat0s3549g0120 Pisum sativum
Psat2g082000 Pisum sativum
PSO063G2460 Papaver somniferum
QL01p040948 Quercus lobata
RcHm_v2.0_Chr4g0434941 Rosa chinensis
RcHm_v2.0_Chr4g0434951 Rosa chinensis
RcHm_v2.0_Chr6g0286141 Rosa chinensis
RcHm_v2.0_Chr6g0286191 Rosa chinensis
RcHm_v2.0_Chr6g0286261 Rosa chinensis
RcHm_v2.0_Chr6g0286291 Rosa chinensis
RcHm_v2.0_Chr6g0286301 Rosa chinensis
RcHm_v2.0_Chr6g0286321 Rosa chinensis
Rhsim09G0106600 Rhododendron simsii
Sabra10G0093200 Salix brachista
SalBow8G4707 Salvia bowleyana
Sc11g0003500 Simmondsia chinensis
Sed0022764 Sechium edule
SEGI_30670 Sequoiadendron giganteum
SEGI_33057 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06881 Striga asiatica
SGA_v2.0_scaffold211G42096 Striga asiatica
SGA_v2.0_scaffold73G24371 Striga asiatica
SMO012G0036 Selaginella moellendorffii
SMO119G0319 Selaginella moellendorffii
Solyc04g007190.4 Solanum lycopersicum
Solyc04g007200.4 Solanum lycopersicum
Solyc04g007260.4 Solanum lycopersicum
Sopen04g002260 Solanum pennellii
Sopen04g002320 Solanum pennellii
Sp1g30110 Schrenkiella parvula
Sp5g23330 Schrenkiella parvula
TAR371G0378 Trochodendron aralioides
THA.LOC104808154 Tarenaya hassleriana
THA.LOC104815461 Tarenaya hassleriana
THA.LOC104821911 Tarenaya hassleriana
Thecc.02G226300 Theobroma cacao
Thhalv10019154m.g Eutrema salsugineum
TPR.G27953 Trifolium pratense
TPR.G38336 Trifolium pratense
TWI75G1742 Tripterygium wilfordii
unitig_27.g25253 Utricularia gibba
vmacro10567 Vaccinium macrocarpon
vmacro10568 Vaccinium macrocarpon
VMungo1215G1668 Vigna mungo
Zm00001eb074540 Zea mays
Zm00001eb074550 Zea mays
Zm00001eb249640 Zea mays
Zm00001eb249670 Zea mays

User provided reference genes

Program Settings