Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p15640 Brassica napus
A07p13790 Brassica napus
Aa31LG7G7660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1841 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3993 Anthoceros agrestis
Actinidia02442 Actinidia chinensis
Actinidia04396 Actinidia chinensis
Ah.01g007110 Amaranthus hybridus
AL1G37520 Arabidopsis lyrata
AL1G37530 Arabidopsis lyrata
AL2G29670 Arabidopsis lyrata
AL5G35170 Arabidopsis lyrata
Aqoxy5G00815 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6MCD86 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D86B0Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HH0ZDZ Arachis hypogaea
AT1G23770 Arabidopsis thaliana
AT1G23780 Arabidopsis thaliana
AT1G70360 Arabidopsis thaliana
ATR0739G052 Amborella trichopoda
Atru.chr5.2286 Acer truncatum
Atru.chr5.2290 Acer truncatum
AUR62027025 Chenopodium quinoa
AUR62030867 Chenopodium quinoa
BcaB03g11953 Brassica carinata
BcaB03g14136 Brassica carinata
BcaB06g27743 Brassica carinata
BcaC01g03001 Brassica carinata
BcaC02g08834 Brassica carinata
BcaC02g08838 Brassica carinata
BcaC02g08839 Brassica carinata
BcaC02g08840 Brassica carinata
BcaC06g35052 Brassica carinata
BcaC07g39213 Brassica carinata
BolC4t26586H Brassica oleracea
BolC7t42548H Brassica oleracea
BolC8t49854H Brassica oleracea
BraA04t17199Z Brassica rapa
BraA07t29128Z Brassica rapa
C03p57300 Brassica napus
C04p49930 Brassica napus
C07p20260 Brassica napus
C08p22090 Brassica napus
CAN.G911.43 Capsicum annuum
CANSAT25G1915 Cannabis sativa
CARHR024190 Cardamine hirsuta
CARHR164020 Cardamine hirsuta
CARHR164040 Cardamine hirsuta
Carub.0001s2328 Capsella rubella
Carub.0001s2329 Capsella rubella
Carub.0002s1705 Capsella rubella
Ca_11026_v3 Cicer arietinum L.
CBR_g19394 Chara braunii
Cc02_g20070 Coffea canephora
CDE04G1396 Ceratophyllum demersum
Cfa004695 Carpinus fangiana
Cfa004698 Carpinus fangiana
Ciclev10028208m.g Citrus clementina
Ciclev10028907m.g Citrus clementina
CiPaw.06G163900 Carya illinoinensis
ClCG10G010030 Citrullus lanatus
COL.COLO4_10469 Corchorus olitorius
COL.COLO4_32482 Corchorus olitorius
COL.COLO4_32483 Corchorus olitorius
Cpa.g.c35687 Carica papaya
Cre17.g738800 Chlamydomonas reinhardtii
CsaV3_4G000070 Cucumis sativus L.
CSS0013379 Camellia sinensis var. sinensis
CSS0013739 Camellia sinensis var. sinensis
CSS0043603 Camellia sinensis var. sinensis
CSS0047045 Camellia sinensis var. sinensis
DCAR_021943 Daucus carota
Duzib132G0146 Durio zibethinus
ECA234G0007 Erigeron canadensis
EL10Ac9g22176 Beta vulgaris
Eucgr.G00280 Eucalyptus grandis
Eucgr.H03378 Eucalyptus grandis
Eucgr.I02495 Eucalyptus grandis
Eucgr.I02498 Eucalyptus grandis
FAN04G2985 Fragaria x ananassa
FAN17G0318 Fragaria x ananassa
FAN18G2835 Fragaria x ananassa
FAN20G1538 Fragaria x ananassa
FAN20G2306 Fragaria x ananassa
FAN27G0942 Fragaria x ananassa
FvH4_2g03310 Fragaria vesca
FvH4_4g04631 Fragaria vesca
FvH4_5g20811 Fragaria vesca
Glyma.10G255600 Glycine max
Glyma.20G135900 Glycine max
Gohir.A03G180900 Gossypium hirsutum
Gohir.A13G047900 Gossypium hirsutum
Gohir.D02G203142 Gossypium hirsutum
Gohir.D13G046300 Gossypium hirsutum
Gorai.005G229700 Gossypium raimondii
Gorai.013G052000 Gossypium raimondii
GSVIVG01037051001 Vitis vinifera
HanXRQChr10g0290271 Helianthus annuus
HanXRQChr10g0290281 Helianthus annuus
HanXRQChr10g0290301 Helianthus annuus
HanXRQChr16g0502181 Helianthus annuus
Haze_10290 Corylus avellana
Haze_10291 Corylus avellana
Haze_10296 Corylus avellana
Haze_10298 Corylus avellana
HPP92_007713 Vanilla planifolia
Lalb_Chr06g0164971 Lupinus albus
Lj5g0015963 Lotus japonicus
Lsat_1_v5_gn_5_117220 Lactuca sativa
Lsat_1_v5_gn_5_117240 Lactuca sativa
Manes.07G056700 Manihot esculenta
Mapoly0001s0353 Marchantia polymorpha
MBI16_g32073_MAGBIO Magnolia biondii
MCO07G198 Micromonas commoda
MD05G1106300 Malus domestica
MD10G1110300 Malus domestica
MD10G1110400 Malus domestica
MD10G1110600 Malus domestica
MD10G1110700 Malus domestica
MD10G1175800 Malus domestica
Medtr1g106020 Medicago truncatula
Medtr4g019560 Medicago truncatula
Medtr7g057330 Medicago truncatula
MELO3C018024.2 Cucumis melo
Migut.B00464 Erythranthe guttata
Migut.B00467 Erythranthe guttata
Migut.B00468 Erythranthe guttata
Migut.B00469 Erythranthe guttata
Migut.B00470 Erythranthe guttata
MSTRG.16671 Avicennia marina
Nitab4.5_0000003g0710 Nicotiana tabacum
Nitab4.5_0003918g0020 Nicotiana tabacum
Nn3g19312 Nelumbo nucifera
Nn6g34530 Nelumbo nucifera
Oeu025307.1 Olea europaea
Os03g0232000 Oryza sativa ssp. japonica
Peaxi162Scf00152g00641 Petunia axillaris
PGR102G1148 Punica granatum
PGR102G1733 Punica granatum
PGR119G2181 Punica granatum
PGR142G0099 Punica granatum
PGSC0003DMG400021329 Solanum tuberosum
Phvul.005G029000 Phaseolus vulgaris
Phvul.005G029200 Phaseolus vulgaris
Phvul.005G037100 Phaseolus vulgaris
Phvul.007G047200 Phaseolus vulgaris
Potri.005G109700 Populus trichocarpa
Potri.015G020600 Populus trichocarpa
Potri.017G134500 Populus trichocarpa
Pp3c15_1340 Physcomitrium patens
Prupe.8G150500 Prunus persica
Psat6g213160 Pisum sativum
PSO017G1120 Papaver somniferum
PSO017G1612 Papaver somniferum
PSO017G5705 Papaver somniferum
PSO017G7033 Papaver somniferum
PSO170G0850 Papaver somniferum
PSO170G1569 Papaver somniferum
PSO170G5054 Papaver somniferum
QL11p029247 Quercus lobata
RcHm_v2.0_Chr4g0395411 Rosa chinensis
RcHm_v2.0_Chr4g0407371 Rosa chinensis
RcHm_v2.0_Chr4g0407381 Rosa chinensis
RcHm_v2.0_Chr4g0407391 Rosa chinensis
RcHm_v2.0_Chr6g0248431 Rosa chinensis
Rhsim05G0093000 Rhododendron simsii
Sabra05G0090000 Salix brachista
SalBow6G6060 Salvia bowleyana
Sc18g0007350 Simmondsia chinensis
Sed0000294 Sechium edule
Sed0003270 Sechium edule
Sed0009840 Sechium edule
Sed0016990 Sechium edule
Sed0023460 Sechium edule
SEGI_36088 Sequoiadendron giganteum
SEGI_41103 Sequoiadendron giganteum
SGA_v2.0_scaffold225G43063 Striga asiatica
SMO270G0122 Selaginella moellendorffii
Solyc01g006990.4 Solanum lycopersicum
Sopen01g002980 Solanum pennellii
Sp1g21160 Schrenkiella parvula
Sp7g01980 Schrenkiella parvula
TAR381G0023 Trochodendron aralioides
TAR625G0452 Trochodendron aralioides
THA.LOC104822142 Tarenaya hassleriana
THA.LOC104824678 Tarenaya hassleriana
Thecc.02G120200 Theobroma cacao
Thhalv10009461m.g Eutrema salsugineum
TPR.G21155 Trifolium pratense
TWI14G0922 Tripterygium wilfordii
TWI14G1256 Tripterygium wilfordii
unitig_744.g24206 Utricularia gibba
vmacro22257 Vaccinium macrocarpon
VMungo0720G1031 Vigna mungo
Zm00001eb009480 Zea mays

User provided reference genes

Program Settings