Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p27660 Brassica napus
A07p43490 Brassica napus
Aa31LG7G6200 Aethionema arabicum
Aa31sc26G120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2872 Anthoceros agrestis
Actinidia10321 Actinidia chinensis
Actinidia10322 Actinidia chinensis
Actinidia27185 Actinidia chinensis
Actinidia30770 Actinidia chinensis
Actinidia30771 Actinidia chinensis
Ah.05g169990 Amaranthus hybridus
AL1G35730 Arabidopsis lyrata
AL1G36770 Arabidopsis lyrata
Aqoxy4G03086 Aquilegia oxysepala
Aqoxy6G00790 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.92N1A9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZN2UT8 Arachis hypogaea
AT1G22260 Arabidopsis thaliana
AT1G22275 Arabidopsis thaliana
ATR0782G233 Amborella trichopoda
Atru.chr13.1191 Acer truncatum
Atru.chr13.1193 Acer truncatum
AUR62027754 Chenopodium quinoa
AUR62038519 Chenopodium quinoa
BcaB02g07153 Brassica carinata
BcaB03g15987 Brassica carinata
BcaB03g15988 Brassica carinata
BcaB03g15989 Brassica carinata
BcaB06g27425 Brassica carinata
BcaC08g44544 Brassica carinata
BcaC08g45430 Brassica carinata
BcaC08g47393 Brassica carinata
BolC5t31211H Brassica oleracea
BolC6t38227H Brassica oleracea
BolC6t40236H Brassica oleracea
BraA07t30407Z Brassica rapa
BraA07t31861Z Brassica rapa
C06p30630 Brassica napus
C06p52130 Brassica napus
CAN.G101.20 Capsicum annuum
CAN.G1227.18 Capsicum annuum
CANSAT25G1637 Cannabis sativa
CARHR022600 Cardamine hirsuta
CARHR022630 Cardamine hirsuta
CARHR022640 Cardamine hirsuta
CARHR022660 Cardamine hirsuta
Carub.0001s2181 Capsella rubella
Carub.0001s2183 Capsella rubella
Ca_05276_v3 Cicer arietinum L.
Ca_05283_v3 Cicer arietinum L.
CBR_g45286 Chara braunii
Cc02_g10170 Coffea canephora
Cc02_g31800 Coffea canephora
Cc10_g07230 Coffea canephora
CDE10G0427 Ceratophyllum demersum
CDE10G0763 Ceratophyllum demersum
Cfa013633 Carpinus fangiana
Ciclev10000237m.g Citrus clementina
CiPaw.08G045100 Carya illinoinensis
ClCG11G015270 Citrullus lanatus
COL.COLO4_16402 Corchorus olitorius
Cpa.g.sc36.129 Carica papaya
CsaV3_3G048690 Cucumis sativus L.
CSS0008540 Camellia sinensis var. sinensis
DCAR_031330 Daucus carota
Dinv44773 Davidia involucrata
Duzib093G0574 Durio zibethinus
Duzib093G1287 Durio zibethinus
ECA233G3681 Erigeron canadensis
ECA233G4469 Erigeron canadensis
ECA236G3179 Erigeron canadensis
EL10Ac1g01221 Beta vulgaris
Eucgr.F00323 Eucalyptus grandis
FAN04G0832 Fragaria x ananassa
FAN08G0731 Fragaria x ananassa
FAN08G1794 Fragaria x ananassa
FAN08G2234 Fragaria x ananassa
FAN08G2337 Fragaria x ananassa
FAN13G0595 Fragaria x ananassa
FAN18G0092 Fragaria x ananassa
FAN18G0240 Fragaria x ananassa
FAN18G2458 Fragaria x ananassa
FAN18G2959 Fragaria x ananassa
FAN18G3881 Fragaria x ananassa
FvH4_5g32650 Fragaria vesca
FvH4_5g32780 Fragaria vesca
FvH4_5g37341 Fragaria vesca
FvH4_5g37876 Fragaria vesca
FvH4_5g37878 Fragaria vesca
FvH4_5g37879 Fragaria vesca
FvH4_5g39260 Fragaria vesca
FvH4_5g39261 Fragaria vesca
FvH4_6g40021 Fragaria vesca
Glyma.13G089100 Glycine max
Glyma.14G121700 Glycine max
Glyma.14G173000 Glycine max
Gohir.A05G226500 Gossypium hirsutum
Gohir.D05G229200 Gossypium hirsutum
Gorai.009G237200 Gossypium raimondii
GSVIVG01009028001 Vitis vinifera
HanXRQChr13g0402471 Helianthus annuus
HanXRQChr13g0402531 Helianthus annuus
Haze_22265 Corylus avellana
HPP92_004286 Vanilla planifolia
Hund16907 Selenicereus undatus
Hund16910 Selenicereus undatus
Lalb_Chr10g0102381 Lupinus albus
Lalb_Chr10g0102391 Lupinus albus
Lj1g0018735 Lotus japonicus
Lj5A269G20 Lonicera japonica
Lj5C255G21 Lonicera japonica
Lj5C269T10 Lonicera japonica
Lsat_1_v5_gn_1_3120 Lactuca sativa
Manes.18G067700 Manihot esculenta
Mapoly0040s0123 Marchantia polymorpha
MBI02_g14193_MAGBIO Magnolia biondii
MBI05_g14901_MAGBIO Magnolia biondii
MBI05_g41336_MAGBIO Magnolia biondii
MBI08_g24353_MAGBIO Magnolia biondii
MD15G1368600 Malus domestica
Medtr5g063730 Medicago truncatula
MELO3C003452.2 Cucumis melo
Migut.C01172 Erythranthe guttata
MSTRG.1476 Avicennia marina
MSTRG.1477 Avicennia marina
Nitab4.5_0000232g0220 Nicotiana tabacum
Nitab4.5_0005777g0080 Nicotiana tabacum
Nn1g05352 Nelumbo nucifera
Oeu012925.3 Olea europaea
Oeu046297.1 Olea europaea
Os04g0452500 Oryza sativa ssp. japonica
Peaxi162Scf00041g01739 Petunia axillaris
PGR042G0634 Punica granatum
PGSC0003DMG400006412 Solanum tuberosum
Phvul.008G173500 Phaseolus vulgaris
Potri.002G096400 Populus trichocarpa
Prupe.1G516800 Prunus persica
Psat2g073040 Pisum sativum
Psat7g137280 Pisum sativum
PSO063G1836 Papaver somniferum
PSO761G0292 Papaver somniferum
PSO832G0815 Papaver somniferum
QL12p036753 Quercus lobata
RcHm_v2.0_Chr0c28g0500891 Rosa chinensis
RcHm_v2.0_Chr0c28g0500941 Rosa chinensis
RcHm_v2.0_Chr0c28g0500951 Rosa chinensis
RcHm_v2.0_Chr0c28g0501001 Rosa chinensis
RcHm_v2.0_Chr0c28g0501031 Rosa chinensis
RcHm_v2.0_Chr0c28g0501041 Rosa chinensis
RcHm_v2.0_Chr2g0168611 Rosa chinensis
RcHm_v2.0_Chr5g0076521 Rosa chinensis
RcHm_v2.0_Chr7g0227211 Rosa chinensis
RcHm_v2.0_Chr7g0239001 Rosa chinensis
RcHm_v2.0_Chr7g0240441 Rosa chinensis
RcHm_v2.0_Chr7g0243501 Rosa chinensis
RcHm_v2.0_Chr7g0243551 Rosa chinensis
RcHm_v2.0_Chr7g0243591 Rosa chinensis
RcHm_v2.0_Chr7g0243601 Rosa chinensis
RcHm_v2.0_Chr7g0243631 Rosa chinensis
Rhsim06G0082300 Rhododendron simsii
Sabra02G0075900 Salix brachista
Sc23g0000220 Simmondsia chinensis
Sed0000627 Sechium edule
SEGI_01702 Sequoiadendron giganteum
SEGI_13289 Sequoiadendron giganteum
SEGI_27299 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10490 Striga asiatica
SHI03709 Sapria himalayana
SHI03711 Sapria himalayana
SHI03714 Sapria himalayana
SMO230G0003 Selaginella moellendorffii
Solyc04g074120.4 Solanum lycopersicum
Sopen04g029300 Solanum pennellii
Sp5g33310 Schrenkiella parvula
TAR628G0803 Trochodendron aralioides
THA.LOC104810802 Tarenaya hassleriana
Thecc.08G107000 Theobroma cacao
Thhalv10018107m.g Eutrema salsugineum
TPR.G16743 Trifolium pratense
TPR.G16752 Trifolium pratense
TPR.G33088 Trifolium pratense
TPR.G7886 Trifolium pratense
TPR.G7899 Trifolium pratense
TPR.G7904 Trifolium pratense
TWI12G1339 Tripterygium wilfordii
TWI56G0580 Tripterygium wilfordii
unitig_899.g14555 Utricularia gibba
vmacro13001 Vaccinium macrocarpon
vmacro18796 Vaccinium macrocarpon
vmacro18810 Vaccinium macrocarpon
vmacro21271 Vaccinium macrocarpon
VMungo0647G0446 Vigna mungo
VMungo0647G2290 Vigna mungo
VMungo0647G2412 Vigna mungo
Zm00001eb423930 Zea mays

User provided reference genes

Program Settings