Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18540 Brassica napus
A06p13880 Brassica napus
A07p39150 Brassica napus
A09p60190 Brassica napus
Aa31LG4G3480 Aethionema arabicum
Aa31LG7G2640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2475 Anthoceros agrestis
Actinidia06838 Actinidia chinensis
AL1G30180 Arabidopsis lyrata
AL2G32970 Arabidopsis lyrata
Aqoxy3G04358 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.28MV8S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3LZL4F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AF40JB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HH6FHR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3UW9X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K1F8KI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LRB6U9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PE1W7W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PSQB2R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W0PAIX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W71D15 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XN9UYN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XZC4F6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y1U1WE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZVJ3VC Arachis hypogaea
AT1G17820 Arabidopsis thaliana
AT1G73200 Arabidopsis thaliana
ATR0124G004 Amborella trichopoda
Atru.chr9.57 Acer truncatum
AUR62040635 Chenopodium quinoa
AUR62040636 Chenopodium quinoa
AUR62041605 Chenopodium quinoa
BcaB07g34006 Brassica carinata
BcaC07g41354 Brassica carinata
BcaC07g41355 Brassica carinata
BcaNung05482 Brassica carinata
BcaNung06733 Brassica carinata
BolC2t09128H Brassica oleracea
BolC5t30322H Brassica oleracea
BolC6t39773H Brassica oleracea
BolC8t51909H Brassica oleracea
BraA02t06893Z Brassica rapa
BraA06t24529Z Brassica rapa
BraA07t31464Z Brassica rapa
BraA09t41388Z Brassica rapa
C02p30730 Brassica napus
C05p16200 Brassica napus
C06p47340 Brassica napus
C08p43630 Brassica napus
CAN.G14.48 Capsicum annuum
CAN.G65.58 Capsicum annuum
CAN.G852.8 Capsicum annuum
CAN.G861.8 Capsicum annuum
CANSAT80G2441 Cannabis sativa
CARHR018430 Cardamine hirsuta
CARHR066210 Cardamine hirsuta
Carub.0001s1755 Capsella rubella
Carub.0002s1999 Capsella rubella
Ca_09923_v3 Cicer arietinum L.
Ca_25290_v3 Cicer arietinum L.
Ca_25303_v3 Cicer arietinum L.
Ca_30180_v3 Cicer arietinum L.
Cc04_g13620 Coffea canephora
CDE04G1302 Ceratophyllum demersum
CDE07G1702 Ceratophyllum demersum
Cfa017818 Carpinus fangiana
Ciclev10019478m.g Citrus clementina
CiPaw.15G108700 Carya illinoinensis
CiPaw.15G108800 Carya illinoinensis
CiPaw.16G076700 Carya illinoinensis
ClCG01G014650 Citrullus lanatus
COL.COLO4_22900 Corchorus olitorius
COL.COLO4_22901 Corchorus olitorius
Cpa.g.c34760 Carica papaya
Cpa.g.c43819 Carica papaya
Cpa.g.sc124.9 Carica papaya
Cpa.g.sc829.1 Carica papaya
Cre06.g285700 Chlamydomonas reinhardtii
CsaV3_1G007680 Cucumis sativus L.
CSS0005530 Camellia sinensis var. sinensis
DCAR_011394 Daucus carota
DCAR_011395 Daucus carota
Dinv11742 Davidia involucrata
Duzib192G0928 Durio zibethinus
Duzib235G1490 Durio zibethinus
ECA232G4824 Erigeron canadensis
EL10Ac8g19467 Beta vulgaris
Eucgr.H00671 Eucalyptus grandis
FAN04G2252 Fragaria x ananassa
FAN08G2984 Fragaria x ananassa
FAN13G0815 Fragaria x ananassa
FAN18G2761 Fragaria x ananassa
FvH4_5g18670 Fragaria vesca
Glyma.09G160200 Glycine max
Glyma.10G174700 Glycine max
Glyma.16G209600 Glycine max
Gohir.A05G111401 Gossypium hirsutum
Gohir.A05G111700 Gossypium hirsutum
Gohir.A06G181400 Gossypium hirsutum
Gohir.D05G112200 Gossypium hirsutum
Gohir.D06G188200 Gossypium hirsutum
Gorai.009G116400 Gossypium raimondii
Gorai.010G220600 Gossypium raimondii
GSVIVG01024229001 Vitis vinifera
HanXRQChr08g0220881 Helianthus annuus
HanXRQChr15g0492171 Helianthus annuus
Haze_18391 Corylus avellana
Hma1.2p1_0807F.1_g221460 Hydrangea macrophylla
Hund06742 Selenicereus undatus
Hund22361 Selenicereus undatus
Lalb_Chr06g0168711 Lupinus albus
Lalb_Chr14g0370061 Lupinus albus
Lalb_Chr21g0311711 Lupinus albus
Lj2g0009881 Lotus japonicus
Lj5A169T97 Lonicera japonica
Lj5g0000329 Lotus japonicus
Lj9A410T67 Lonicera japonica
Lj9C232G5 Lonicera japonica
Lsat_1_v5_gn_0_10721 Lactuca sativa
Manes.01G159600 Manihot esculenta
Manes.02G118200 Manihot esculenta
Mapoly0036s0110 Marchantia polymorpha
MBI06_g37980_MAGBIO Magnolia biondii
MCO11G907 Micromonas commoda
MD14G1000100 Malus domestica
Medtr1g077470 Medicago truncatula
Medtr6g066300 Medicago truncatula
MELO3C002186.2 Cucumis melo
Migut.O00291 Erythranthe guttata
MSTRG.23219 Avicennia marina
Nitab4.5_0000477g0020 Nicotiana tabacum
Nitab4.5_0000854g0120 Nicotiana tabacum
Nitab4.5_0003367g0050 Nicotiana tabacum
Nitab4.5_0004170g0020 Nicotiana tabacum
Nn3g18516 Nelumbo nucifera
Oeu034417.1 Olea europaea
Oeu034418.1 Olea europaea
Oeu063704.1 Olea europaea
Os02g0827500 Oryza sativa ssp. japonica
Peaxi162Scf00643g00431 Petunia axillaris
Peaxi162Scf01390g00035 Petunia axillaris
PGR083G2526 Punica granatum
PGSC0003DMG400015207 Solanum tuberosum
PGSC0003DMG400027062 Solanum tuberosum
Phvul.004G135600 Phaseolus vulgaris
Phvul.L006701 Phaseolus vulgaris
Potri.017G155000 Populus trichocarpa
Potri.018G152400 Populus trichocarpa
Pp3c14_11980 Physcomitrium patens
Pp3c17_10430 Physcomitrium patens
Pp3c1_25660 Physcomitrium patens
Pp3c5_12280 Physcomitrium patens
Pp3c6_14220 Physcomitrium patens
Prupe.5G246400 Prunus persica
Psat1g117720 Pisum sativum
Psat6g054360 Pisum sativum
PSO063G3260 Papaver somniferum
PSO782G2561 Papaver somniferum
QL10p035447 Quercus lobata
QL10p035454 Quercus lobata
QL10p036794 Quercus lobata
QL10p036801 Quercus lobata
RcHm_v2.0_Chr7g0176841 Rosa chinensis
Rhsim05G0011100 Rhododendron simsii
Sabra17G0126700 Salix brachista
SalBow5G1620 Salvia bowleyana
Sc12g0007780 Simmondsia chinensis
Sed0011518 Sechium edule
SEGI_02714 Sequoiadendron giganteum
SEGI_25111 Sequoiadendron giganteum
SEGI_27258 Sequoiadendron giganteum
SEGI_39901 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10715 Striga asiatica
SMO361G0167 Selaginella moellendorffii
Solyc03g019770.4 Solanum lycopersicum
Solyc06g072110.4 Solanum lycopersicum
Sopen03g029860 Solanum pennellii
Sopen06g028400 Solanum pennellii
Sp1g15900 Schrenkiella parvula
Sp5g28170 Schrenkiella parvula
TAR622G0755 Trochodendron aralioides
THA.LOC104812198 Tarenaya hassleriana
Thecc.06G006900 Theobroma cacao
Thhalv10006829m.g Eutrema salsugineum
Thhalv10018153m.g Eutrema salsugineum
TPR.G8860 Trifolium pratense
TPR.G8876 Trifolium pratense
TWI36G1567 Tripterygium wilfordii
TWI81G0199 Tripterygium wilfordii
vmacro17772 Vaccinium macrocarpon
VMungo0464G0665 Vigna mungo
VMungo0720G0805 Vigna mungo
Zm00001eb190790 Zea mays
Zm00001eb228970 Zea mays

User provided reference genes

Program Settings