Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22410 Brassica napus
A07p27430 Brassica napus
A07p44070 Brassica napus
Aa31LG4G2100 Aethionema arabicum
Aa31LG4G2210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2488 Anthoceros agrestis
Actinidia21886 Actinidia chinensis
Actinidia35911 Actinidia chinensis
Actinidia38808 Actinidia chinensis
Ah.16g108080 Amaranthus hybridus
AL2G39320 Arabidopsis lyrata
Aqoxy4G02358 Aquilegia oxysepala
Aqoxy7G02759 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A6WMM1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EJI1J0 Arachis hypogaea
AT1G16820 Arabidopsis thaliana
AT1G78900 Arabidopsis thaliana
ATR0626G015 Amborella trichopoda
Atru.chr1.2661 Acer truncatum
AUR62036002 Chenopodium quinoa
AUR62041619 Chenopodium quinoa
BcaB02g07185 Brassica carinata
BcaB03g15562 Brassica carinata
BcaB03g16050 Brassica carinata
BcaB04g17947 Brassica carinata
BcaB05g25163 Brassica carinata
BcaB08g35590 Brassica carinata
BcaC03g15855 Brassica carinata
BcaC05g25675 Brassica carinata
BcaC08g45403 Brassica carinata
BcaC08g47444 Brassica carinata
BolC2t09622H Brassica oleracea
BolC5t30247H Brassica oleracea
BolC6t38198H Brassica oleracea
BolC6t40297H Brassica oleracea
BraA02t07245Z Brassica rapa
BraA07t30384Z Brassica rapa
BraA07t31915Z Brassica rapa
C02p36070 Brassica napus
C06p30350 Brassica napus
C06p52800 Brassica napus
CAN.G308.15 Capsicum annuum
CAN.G350.34 Capsicum annuum
CAN.G390.38 Capsicum annuum
CAN.G390.39 Capsicum annuum
CANSAT01G2292 Cannabis sativa
CARHR072490 Cardamine hirsuta
Carub.0002s2573 Capsella rubella
Ca_20969_v3 Cicer arietinum L.
CBR_g8589 Chara braunii
Cc04_g00160 Coffea canephora
CDE02G1613 Ceratophyllum demersum
CDE02G3722 Ceratophyllum demersum
CDE05G0596 Ceratophyllum demersum
CDE05G1125 Ceratophyllum demersum
CDE06G2075 Ceratophyllum demersum
Cfa002154 Carpinus fangiana
Cfa023814 Carpinus fangiana
Ciclev10030969m.g Citrus clementina
CiPaw.01G091000 Carya illinoinensis
ClCG09G001630 Citrullus lanatus
COL.COLO4_31156 Corchorus olitorius
Cpa.g.sc155.13 Carica papaya
Cre10.g461050 Chlamydomonas reinhardtii
CsaV3_7G033710 Cucumis sativus L.
CSS0005058 Camellia sinensis var. sinensis
CSS0028180 Camellia sinensis var. sinensis
CSS0044695 Camellia sinensis var. sinensis
DCAR_007671 Daucus carota
Dinv20336 Davidia involucrata
Dinv20337 Davidia involucrata
Dinv37778 Davidia involucrata
Duzib160G0715 Durio zibethinus
Duzib192G0250 Durio zibethinus
Duzib235G1262 Durio zibethinus
ECA234G0432 Erigeron canadensis
ECA234G3399 Erigeron canadensis
EL10Ac2g03529 Beta vulgaris
Eucgr.F04030 Eucalyptus grandis
Eucgr.J03179 Eucalyptus grandis
FAN02G2379 Fragaria x ananassa
FAN05G5356 Fragaria x ananassa
FAN09G3564 Fragaria x ananassa
FAN14G5213 Fragaria x ananassa
FAN14G5743 Fragaria x ananassa
FvH4_6g37000 Fragaria vesca
Glyma.07G002300 Glycine max
Glyma.08G224400 Glycine max
Gohir.A05G114800 Gossypium hirsutum
Gohir.A10G002200 Gossypium hirsutum
Gohir.D05G115200 Gossypium hirsutum
Gohir.D10G002200 Gossypium hirsutum
Gorai.009G119300 Gossypium raimondii
Gorai.011G002600 Gossypium raimondii
GSVIVG01029546001 Vitis vinifera
GSVIVG01035538001 Vitis vinifera
HanXRQChr10g0311201 Helianthus annuus
HanXRQChr12g0359711 Helianthus annuus
HanXRQChr13g0389211 Helianthus annuus
HanXRQChr13g0401351 Helianthus annuus
Haze_16255 Corylus avellana
Haze_26600 Corylus avellana
Hma1.2p1_0517F.1_g170820 Hydrangea macrophylla
Hma1.2p1_0745F.1_g212020 Hydrangea macrophylla
Hma1.2p1_1111F.1_g258430 Hydrangea macrophylla
Hma1.2p1_3612F.1_g337050 Hydrangea macrophylla
HPP92_010142 Vanilla planifolia
Hund19288 Selenicereus undatus
Hund22442 Selenicereus undatus
Lalb_Chr01g0011701 Lupinus albus
Lj3g0014966 Lotus japonicus
Lj9A542G29 Lonicera japonica
Lsat_1_v5_gn_4_89100 Lactuca sativa
Lsat_1_v5_gn_5_137221 Lactuca sativa
Manes.06G177500 Manihot esculenta
Manes.14G008200 Manihot esculenta
Mapoly0011s0112 Marchantia polymorpha
MBI16_g34879_MAGBIO Magnolia biondii
MCO15G659 Micromonas commoda
MD09G1165200 Malus domestica
MD17G1162700 Malus domestica
Medtr4g005410 Medicago truncatula
MELO3C024284.2 Cucumis melo
Migut.D00889 Erythranthe guttata
Migut.I01199 Erythranthe guttata
MSTRG.10875 Avicennia marina
MSTRG.4524 Avicennia marina
MSTRG.9558 Avicennia marina
Nitab4.5_0000357g0270 Nicotiana tabacum
Nitab4.5_0002354g0050 Nicotiana tabacum
Nitab4.5_0003757g0110 Nicotiana tabacum
Nitab4.5_0007548g0050 Nicotiana tabacum
Nn8g40889 Nelumbo nucifera
Oeu038373.4 Olea europaea
Oeu048560.2 Olea europaea
Oeu049636.1 Olea europaea
Os02g0175400 Oryza sativa ssp. japonica
Os06g0662000 Oryza sativa ssp. japonica
Peaxi162Scf00177g00618 Petunia axillaris
PGR102G0759 Punica granatum
PGSC0003DMG400026502 Solanum tuberosum
PGSC0003DMG400028839 Solanum tuberosum
Phvul.010G163900 Phaseolus vulgaris
Potri.008G005000 Populus trichocarpa
Potri.010G253500 Populus trichocarpa
Pp3c20_16000 Physcomitrium patens
Pp3c23_8330 Physcomitrium patens
Pp3c8_10370 Physcomitrium patens
PRCOL_00000884 Prasinoderma coloniale
Prupe.3G022700 Prunus persica
Psat7g016840 Pisum sativum
Psat7g016880 Pisum sativum
Psat7g142360 Pisum sativum
Psat7g265520 Pisum sativum
PSO144G0044 Papaver somniferum
PSO170G3382 Papaver somniferum
QL05p084430 Quercus lobata
QL05p084776 Quercus lobata
RcHm_v2.0_Chr1g0336251 Rosa chinensis
RcHm_v2.0_Chr2g0149541 Rosa chinensis
RcHm_v2.0_Chr4g0426951 Rosa chinensis
RcHm_v2.0_Chr4g0434561 Rosa chinensis
Rhsim08G0250100 Rhododendron simsii
Sabra08G0002500 Salix brachista
Sabra10G0197200 Salix brachista
SalBow6G0193 Salvia bowleyana
Sc12g0011160 Simmondsia chinensis
Sc12g0011170 Simmondsia chinensis
Sc15g0001120 Simmondsia chinensis
Sed0012993 Sechium edule
SEGI_20998 Sequoiadendron giganteum
SEGI_31477 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33265 Striga asiatica
SGA_v2.0_scaffold71G23987 Striga asiatica
SMO351G0215 Selaginella moellendorffii
Solyc06g063330.3 Solanum lycopersicum
Solyc12g055800.3 Solanum lycopersicum
Sopen06g022800 Solanum pennellii
Sopen12g024260 Solanum pennellii
Sp5g33920 Schrenkiella parvula
TAR383G0695 Trochodendron aralioides
TAR626G0762 Trochodendron aralioides
THA.LOC104808104 Tarenaya hassleriana
THA.LOC104812329 Tarenaya hassleriana
THA.LOC104813629 Tarenaya hassleriana
Thecc.06G057300 Theobroma cacao
Thhalv10018288m.g Eutrema salsugineum
TPR.G38757 Trifolium pratense
TWI18G1026 Tripterygium wilfordii
TWI75G0499 Tripterygium wilfordii
unitig_748.g7473 Utricularia gibba
vmacro18745 Vaccinium macrocarpon
VMungo0331G0590 Vigna mungo
Zm00001eb206930 Zea mays
Zm00001eb233450 Zea mays

User provided reference genes

Program Settings