Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p37810 Brassica napus
Aa31LG8G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1485 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.344 Anthoceros agrestis
Actinidia22416 Actinidia chinensis
Ah.10g033720 Amaranthus hybridus
AL3G24480 Arabidopsis lyrata
Aqoxy1G01416 Aquilegia oxysepala
Aqoxy72s003 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JYF968 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T86MTP Arachis hypogaea
AT1G36580 Arabidopsis thaliana
AT2G07640 Arabidopsis thaliana
AT3G12800 Arabidopsis thaliana
ATR0697G295 Amborella trichopoda
Atru.chr1.96 Acer truncatum
Atru.chr10.457 Acer truncatum
AUR62029759 Chenopodium quinoa
AUR62032089 Chenopodium quinoa
AUR62040866 Chenopodium quinoa
BcaB04g18721 Brassica carinata
BcaB06g25510 Brassica carinata
BcaC01g04035 Brassica carinata
BolC3t16863H Brassica oleracea
BraA03t12936Z Brassica rapa
CAN.G1090.23 Capsicum annuum
CAN.G15.4 Capsicum annuum
CAN.G213.21 Capsicum annuum
CAN.G300.7 Capsicum annuum
CAN.G368.2 Capsicum annuum
CAN.G395.5 Capsicum annuum
CAN.G426.31 Capsicum annuum
CAN.G764.1 Capsicum annuum
CAN.G943.55 Capsicum annuum
CANSAT80G0498 Cannabis sativa
CANSAT80G0618 Cannabis sativa
CANSAT80G1187 Cannabis sativa
CARHR087330 Cardamine hirsuta
Carub.0003s1216 Capsella rubella
Ca_25908_v3 Cicer arietinum L.
Ca_30115_v3 Cicer arietinum L.
CBR_g6539 Chara braunii
Cc05_g16430 Coffea canephora
CDE02G2163 Ceratophyllum demersum
CDE06G1011 Ceratophyllum demersum
Cfa000694 Carpinus fangiana
Cfa019401 Carpinus fangiana
Cfa024890 Carpinus fangiana
Ciclev10005524m.g Citrus clementina
Ciclev10016100m.g Citrus clementina
CiPaw.10G063600 Carya illinoinensis
CiPaw.11G061000 Carya illinoinensis
ClCG09G022700 Citrullus lanatus
COL.COLO4_17645 Corchorus olitorius
COL.COLO4_19751 Corchorus olitorius
Cpa.g.sc30.144 Carica papaya
Cpa.g.sc32.29 Carica papaya
Cpa.g.sc32.32 Carica papaya
Cre17.g731850 Chlamydomonas reinhardtii
CsaV3_7G022900 Cucumis sativus L.
CSS0006688 Camellia sinensis var. sinensis
CSS0010976 Camellia sinensis var. sinensis
CSS0044390 Camellia sinensis var. sinensis
DCAR_019918 Daucus carota
Dinv09060 Davidia involucrata
Dinv19586 Davidia involucrata
Duzib052G0366 Durio zibethinus
Duzib132G1003 Durio zibethinus
Duzib248G1596 Durio zibethinus
Duzib268G0350 Durio zibethinus
ECA240G1189 Erigeron canadensis
ECA246G5026 Erigeron canadensis
EL10Ac2g03234 Beta vulgaris
Eucgr.D00036 Eucalyptus grandis
Eucgr.F04461 Eucalyptus grandis
FAN11G1209 Fragaria x ananassa
FAN16G1927 Fragaria x ananassa
FAN16G2962 Fragaria x ananassa
FAN21G0618 Fragaria x ananassa
FAN21G3976 Fragaria x ananassa
FAN25G0305 Fragaria x ananassa
FAN25G2342 Fragaria x ananassa
FvH4_3g12490 Fragaria vesca
FvH4_3g14740 Fragaria vesca
Glyma.08G237400 Glycine max
Glyma.15G213100 Glycine max
Gohir.A04G050800 Gossypium hirsutum
Gohir.A08G232000 Gossypium hirsutum
Gohir.A12G047600 Gossypium hirsutum
Gohir.D08G252400 Gossypium hirsutum
Gohir.D12G046300 Gossypium hirsutum
Gorai.004G269100 Gossypium raimondii
Gorai.008G049000 Gossypium raimondii
Gorai.009G353800 Gossypium raimondii
GSVIVG01012113001 Vitis vinifera
GSVIVG01036762001 Vitis vinifera
HanXRQChr03g0078181 Helianthus annuus
HanXRQChr03g0078191 Helianthus annuus
HanXRQChr12g0381551 Helianthus annuus
Haze_06095 Corylus avellana
Haze_06096 Corylus avellana
Haze_07801 Corylus avellana
Hma1.2p1_0151F.1_g067260 Hydrangea macrophylla
Hma1.2p1_0181F.1_g080070 Hydrangea macrophylla
HPP92_016428 Vanilla planifolia
HPP92_026361 Vanilla planifolia
Lalb_Chr19g0133211 Lupinus albus
Lj2A13T24 Lonicera japonica
Lj2A345T27 Lonicera japonica
Lj3g0015370 Lotus japonicus
Lsat_1_v5_gn_3_107180 Lactuca sativa
Lsat_1_v5_gn_7_75601 Lactuca sativa
Manes.03G069001 Manihot esculenta
Manes.14G009200 Manihot esculenta
Mapoly0057s0046 Marchantia polymorpha
MBI18_g11461_MAGBIO Magnolia biondii
MD05G1229700 Malus domestica
MD05G1249900 Malus domestica
MD10G1209100 Malus domestica
MD10G1230700 Malus domestica
MD10G1230800 Malus domestica
Medtr8g442750 Medicago truncatula
MELO3C012608.2 Cucumis melo
Migut.H01667 Erythranthe guttata
Migut.M01523 Erythranthe guttata
MSTRG.16098 Avicennia marina
Nitab4.5_0000029g0290 Nicotiana tabacum
Nitab4.5_0000029g0300 Nicotiana tabacum
Nitab4.5_0006109g0040 Nicotiana tabacum
Nn7g38230 Nelumbo nucifera
Oeu019723.1 Olea europaea
Oeu034981.1 Olea europaea
Oeu043715.1 Olea europaea
Os04g0614000 Oryza sativa ssp. japonica
Peaxi162Scf00452g00336 Petunia axillaris
PGR004G2417 Punica granatum
PGR031G2340 Punica granatum
PGSC0003DMG402022117 Solanum tuberosum
Phvul.011G177250 Phaseolus vulgaris
Potri.006G025400 Populus trichocarpa
Potri.012G125900 Populus trichocarpa
Pp3c20_21940 Physcomitrium patens
Pp3c23_13630 Physcomitrium patens
Prupe.4G113900 Prunus persica
Prupe.4G132600 Prunus persica
Psat4g137640 Pisum sativum
Psat4g137680 Pisum sativum
PSO017G1717 Papaver somniferum
PSO238G0039 Papaver somniferum
PSO541G1044 Papaver somniferum
PSO673G0003 Papaver somniferum
PSO675G0014 Papaver somniferum
PSO675G1648 Papaver somniferum
PSO675G6571 Papaver somniferum
PSO675G9327 Papaver somniferum
QL04p087224 Quercus lobata
QL11p013743 Quercus lobata
RcHm_v2.0_Chr5g0020441 Rosa chinensis
RcHm_v2.0_Chr5g0024271 Rosa chinensis
RcHm_v2.0_Chr6g0286111 Rosa chinensis
Rhsim04G0003000 Rhododendron simsii
Sabra06G0018700 Salix brachista
Sabra12G0094800 Salix brachista
SalBow8G4095 Salvia bowleyana
Sc18g0003310 Simmondsia chinensis
Sed0005392 Sechium edule
Sed0021670 Sechium edule
SEGI_16258 Sequoiadendron giganteum
SEGI_31428 Sequoiadendron giganteum
SEGI_41285 Sequoiadendron giganteum
SGA_v2.0_scaffold47G17759 Striga asiatica
SMO116G0107 Selaginella moellendorffii
SMO172G0050 Selaginella moellendorffii
Solyc07g066630.4 Solanum lycopersicum
Sopen07g034780 Solanum pennellii
Sp3g10955 Schrenkiella parvula
Sp3g10960 Schrenkiella parvula
TAR375G0977 Trochodendron aralioides
TAR624G0253 Trochodendron aralioides
TAR626G0906 Trochodendron aralioides
TAR629G0486 Trochodendron aralioides
THA.LOC104826329 Tarenaya hassleriana
Thecc.02G007100 Theobroma cacao
Thecc.07G182300 Theobroma cacao
Thecc.08G124400 Theobroma cacao
Thhalv10021233m.g Eutrema salsugineum
TPR.G7020 Trifolium pratense
TPR.G9418 Trifolium pratense
TWI38G2359 Tripterygium wilfordii
unitig_578.g16335 Utricularia gibba
vmacro09770 Vaccinium macrocarpon
vmacro23254 Vaccinium macrocarpon
VMungo1127G1841 Vigna mungo
Zm00001eb070900 Zea mays
Zm00001eb430820 Zea mays

User provided reference genes

Program Settings