Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p33820 Brassica napus
Aa31LG2G3560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.174 Anthoceros agrestis
Actinidia07245 Actinidia chinensis
Actinidia07930 Actinidia chinensis
Actinidia31274 Actinidia chinensis
Actinidia35463 Actinidia chinensis
Ah.15g090910 Amaranthus hybridus
Ah.15g095780 Amaranthus hybridus
AL2G25690 Arabidopsis lyrata
Aqoxy4G02784 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0J6PHG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D6PK9F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q9WWUM Arachis hypogaea
AT1G67190 Arabidopsis thaliana
ATR0776G025 Amborella trichopoda
Atru.chr3.3255 Acer truncatum
AUR62006173 Chenopodium quinoa
AUR62009763 Chenopodium quinoa
AUR62021589 Chenopodium quinoa
AUR62028536 Chenopodium quinoa
AUR62036179 Chenopodium quinoa
AUR62036180 Chenopodium quinoa
BcaB03g15209 Brassica carinata
BcaC08g46148 Brassica carinata
BolC6t39128H Brassica oleracea
BraA07t31008Z Brassica rapa
C06p43110 Brassica napus
CAN.G1039.14 Capsicum annuum
CAN.G1358.15 Capsicum annuum
CAN.G397.11 Capsicum annuum
CANSAT54G1372 Cannabis sativa
CANSAT80G1046 Cannabis sativa
CANSAT80G2309 Cannabis sativa
CARHR059640 Cardamine hirsuta
Carub.0002s1346 Capsella rubella
Ca_08884_v3 Cicer arietinum L.
Ca_08999_v3 Cicer arietinum L.
Ca_19405_v3 Cicer arietinum L.
Cc06_g05690 Coffea canephora
CDE06G0950 Ceratophyllum demersum
CDE08G1419 Ceratophyllum demersum
Cfa016600 Carpinus fangiana
Ciclev10028521m.g Citrus clementina
CiPaw.13G136000 Carya illinoinensis
CiPaw.13G136100 Carya illinoinensis
CiPaw.13G136300 Carya illinoinensis
CiPaw.14G100300 Carya illinoinensis
ClCG04G010010 Citrullus lanatus
ClCG10G019020 Citrullus lanatus
COL.COLO4_19885 Corchorus olitorius
Cpa.g.sc1448.1 Carica papaya
CsaV3_3G037230 Cucumis sativus L.
CsaV3_6G040650 Cucumis sativus L.
CSS0019661 Camellia sinensis var. sinensis
CSS0032778 Camellia sinensis var. sinensis
DCAR_013382 Daucus carota
Dinv21216 Davidia involucrata
Dinv29477 Davidia involucrata
Dinv31679 Davidia involucrata
Duzib168G1363 Durio zibethinus
ECA233G3236 Erigeron canadensis
ECA236G1444 Erigeron canadensis
EL10Ac7g16924 Beta vulgaris
Eucgr.A01498 Eucalyptus grandis
Eucgr.B03854 Eucalyptus grandis
FAN05G0207 Fragaria x ananassa
FAN05G2045 Fragaria x ananassa
FAN05G4069 Fragaria x ananassa
FAN09G1414 Fragaria x ananassa
FAN14G3815 Fragaria x ananassa
FvH4_6g18580 Fragaria vesca
Glyma.11G183600 Glycine max
Glyma.12G088900 Glycine max
Glyma.19G194600 Glycine max
Gohir.A07G110300 Gossypium hirsutum
Gohir.A09G095500 Gossypium hirsutum
Gohir.D07G113900 Gossypium hirsutum
Gohir.D09G095200 Gossypium hirsutum
Gorai.001G122200 Gossypium raimondii
Gorai.006G111900 Gossypium raimondii
GSVIVG01033833001 Vitis vinifera
GSVIVG01036133001 Vitis vinifera
HanXRQChr02g0044451 Helianthus annuus
HanXRQChr02g0054781 Helianthus annuus
HanXRQChr05g0133171 Helianthus annuus
HanXRQChr05g0133181 Helianthus annuus
HanXRQChr13g0397431 Helianthus annuus
Haze_19602 Corylus avellana
Hma1.2p1_0084F.1_g043700 Hydrangea macrophylla
HPP92_003226 Vanilla planifolia
Hund18755 Selenicereus undatus
Lalb_Chr01g0004851 Lupinus albus
Lalb_Chr02g0154961 Lupinus albus
Lalb_Chr19g0136481 Lupinus albus
Lalb_Chr19g0136491 Lupinus albus
Lj1P237T11 Lonicera japonica
Lj3A997T49 Lonicera japonica
Lj3g0011633 Lotus japonicus
Lsat_1_v5_gn_6_38721 Lactuca sativa
Lsat_1_v5_gn_8_76881 Lactuca sativa
Lsat_1_v5_gn_9_103040 Lactuca sativa
Manes.04G004000 Manihot esculenta
Manes.09G056000 Manihot esculenta
Manes.11G161600 Manihot esculenta
Mapoly0037s0051 Marchantia polymorpha
MBI05_g08793_MAGBIO Magnolia biondii
MBI05_g43550_MAGBIO Magnolia biondii
MBI17_g08366_MAGBIO Magnolia biondii
MD14G1022200 Malus domestica
Medtr1g060040 Medicago truncatula
Medtr4g053260 Medicago truncatula
Medtr7g104490 Medicago truncatula
MELO3C024542.2 Cucumis melo
Migut.J01046 Erythranthe guttata
MSTRG.26643 Avicennia marina
MSTRG.5840 Avicennia marina
Nitab4.5_0000132g0010 Nicotiana tabacum
Nitab4.5_0000202g0240 Nicotiana tabacum
Nitab4.5_0000216g0240 Nicotiana tabacum
Nitab4.5_0000755g0230 Nicotiana tabacum
Nitab4.5_0000963g0070 Nicotiana tabacum
Nitab4.5_0001216g0070 Nicotiana tabacum
Nitab4.5_0001725g0160 Nicotiana tabacum
Nitab4.5_0005483g0030 Nicotiana tabacum
Nitab4.5_0013628g0020 Nicotiana tabacum
Nn2g14149 Nelumbo nucifera
Nn6g34912 Nelumbo nucifera
Oeu009221.1 Olea europaea
Oeu056924.1 Olea europaea
Os01g0859600 Oryza sativa ssp. japonica
Peaxi162Scf00003g00057 Petunia axillaris
Peaxi162Scf00094g00163 Petunia axillaris
Peaxi162Scf00163g00052 Petunia axillaris
Peaxi162Scf00290g00084 Petunia axillaris
PGR004G0231 Punica granatum
PGR102G1638 Punica granatum
PGR102G1861 Punica granatum
PGR102G2183 Punica granatum
PGSC0003DMG400028258 Solanum tuberosum
PGSC0003DMG403002701 Solanum tuberosum
Phvul.001G189500 Phaseolus vulgaris
Phvul.011G093800 Phaseolus vulgaris
Phvul.011G094000 Phaseolus vulgaris
Potri.004G203300 Populus trichocarpa
Potri.009G164200 Populus trichocarpa
Pp3c25_4500 Physcomitrium patens
Prupe.6G129400 Prunus persica
Prupe.7G111200 Prunus persica
Psat0s2993g0080 Pisum sativum
Psat0s2993g0200 Pisum sativum
Psat0s2993g0360 Pisum sativum
Psat3g033640 Pisum sativum
Psat4g110920 Pisum sativum
Psat6g013800 Pisum sativum
PSO339G0354 Papaver somniferum
PSO384G1288 Papaver somniferum
QL01p012332 Quercus lobata
RcHm_v2.0_Chr3g0473131 Rosa chinensis
Rhsim01G0205200 Rhododendron simsii
Rhsim03G0075900 Rhododendron simsii
Sabra04G0137300 Salix brachista
SalBow3G3938 Salvia bowleyana
SalBow5G1330 Salvia bowleyana
Sc12g0004500 Simmondsia chinensis
Sc20g0006250 Simmondsia chinensis
Sed0023871 Sechium edule
SEGI_17169 Sequoiadendron giganteum
SEGI_24231 Sequoiadendron giganteum
SEGI_25159 Sequoiadendron giganteum
SEGI_39785 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06728 Striga asiatica
SGA_v2.0_scaffold75G24751 Striga asiatica
Solyc09g009470.1 Solanum lycopersicum
Solyc10g083480.2 Solanum lycopersicum
Sopen09g004200 Solanum pennellii
Sopen10g032950 Solanum pennellii
Sopen11g027050 Solanum pennellii
Sp5g22120 Schrenkiella parvula
TAR633G2222 Trochodendron aralioides
THA.LOC104800533 Tarenaya hassleriana
THA.LOC104815726 Tarenaya hassleriana
THA.LOC104824558 Tarenaya hassleriana
Thecc.09G284200 Theobroma cacao
Thhalv10018615m.g Eutrema salsugineum
TPR.G11390 Trifolium pratense
TPR.G17200 Trifolium pratense
TPR.G19554 Trifolium pratense
TPR.G21934 Trifolium pratense
TPR.G38209 Trifolium pratense
TPR.G38236 Trifolium pratense
TWI31G0838 Tripterygium wilfordii
VMungo1127G1058 Vigna mungo
VMungo1383G0237 Vigna mungo
Zm00001eb147200 Zea mays

User provided reference genes

Program Settings