Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p51690 Brassica napus
Aa31LG10G13760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis
Actinidia11303 Actinidia chinensis
Ah.06g196060 Amaranthus hybridus
Ah.07g202020 Amaranthus hybridus
Ah.07g202030 Amaranthus hybridus
Ah.07g206270 Amaranthus hybridus
AL5G41310 Arabidopsis lyrata
Aqoxy2G04161 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea
AT3G59410 Arabidopsis thaliana
ATR0824G223 Amborella trichopoda
Atru.chr3.1489 Acer truncatum
AUR62002305 Chenopodium quinoa
AUR62015385 Chenopodium quinoa
BcaC02g10121 Brassica carinata
BcaC07g40280 Brassica carinata
BcaC07g40457 Brassica carinata
BolC8t51043H Brassica oleracea
BraA09t40605Z Brassica rapa
C08p34420 Brassica napus
CAN.G336.5 Capsicum annuum
CAN.G336.6 Capsicum annuum
CAN.G336.7 Capsicum annuum
CAN.G336.8 Capsicum annuum
CANSAT78G0197 Cannabis sativa
CARHR169800 Cardamine hirsuta
CARHR169810 Cardamine hirsuta
Carub.0005s2615 Capsella rubella
Ca_20787_v3 Cicer arietinum L.
Ca_28543_v3 Cicer arietinum L.
Cc00_g29260 Coffea canephora
Cc03_g12950 Coffea canephora
Cc07_g19100 Coffea canephora
CDE02G0726 Ceratophyllum demersum
CDE02G1871 Ceratophyllum demersum
Cfa015169 Carpinus fangiana
Cfa024493 Carpinus fangiana
Ciclev10019579m.g Citrus clementina
Ciclev10023270m.g Citrus clementina
CiPaw.01G100100 Carya illinoinensis
CiPaw.01G100300 Carya illinoinensis
ClCG08G004740 Citrullus lanatus
ClCG08G004750 Citrullus lanatus
ClCG08G004770 Citrullus lanatus
COL.COLO4_10417 Corchorus olitorius
COL.COLO4_10418 Corchorus olitorius
COL.COLO4_12393 Corchorus olitorius
Cpa.g.sc9.274 Carica papaya
Cpa.g.sc9.276 Carica papaya
Cpa.g.sc9.277 Carica papaya
Cpa.g.sc9.279 Carica papaya
Cpa.g.sc9.281 Carica papaya
Cre01.g038000 Chlamydomonas reinhardtii
Cre17.g726950 Chlamydomonas reinhardtii
CsaV3_6G003940 Cucumis sativus L.
CSS0039550 Camellia sinensis var. sinensis
DCAR_021780 Daucus carota
DCAR_023939 Daucus carota
Dinv15708 Davidia involucrata
Dinv17546 Davidia involucrata
Dinv21376 Davidia involucrata
Dinv44191 Davidia involucrata
Duzib151G0706 Durio zibethinus
ECA240G0242 Erigeron canadensis
EL10Ac2g04155 Beta vulgaris
EL10Ac3g05937 Beta vulgaris
EL10Ac8g18701 Beta vulgaris
Eucgr.A00081 Eucalyptus grandis
Eucgr.A00277 Eucalyptus grandis
Eucgr.L02279 Eucalyptus grandis
FAN07G1795 Fragaria x ananassa
FAN12G3204 Fragaria x ananassa
FAN17G1210 Fragaria x ananassa
FAN26G1762 Fragaria x ananassa
FvH4_1g14282 Fragaria vesca
FvH4_4g10800 Fragaria vesca
Glyma.12G052400 Glycine max
Gohir.A10G137350 Gossypium hirsutum
Gohir.D10G129301 Gossypium hirsutum
Gorai.011G142600 Gossypium raimondii
GSVIVG01010755001 Vitis vinifera
GSVIVG01010757001 Vitis vinifera
GSVIVG01010758001 Vitis vinifera
HanXRQChr03g0091131 Helianthus annuus
HanXRQChr08g0224851 Helianthus annuus
Haze_01507 Corylus avellana
Haze_01509 Corylus avellana
Haze_01510 Corylus avellana
Hma1.2p1_0017F.1_g011260 Hydrangea macrophylla
Hma1.2p1_0847F.1_g227860 Hydrangea macrophylla
Hma1.2p1_0847F.1_g227880 Hydrangea macrophylla
Hma1.2p1_0847F.1_g227890 Hydrangea macrophylla
HPP92_023710 Vanilla planifolia
HPP92_023711 Vanilla planifolia
Hund03158 Selenicereus undatus
Lalb_Chr01g0003151 Lupinus albus
Lj3g0017553 Lotus japonicus
Lj6A53G34 Lonicera japonica
Lj6C53T8 Lonicera japonica
Lsat_1_v5_gn_3_115420 Lactuca sativa
Manes.11G120800 Manihot esculenta
Mapoly0088s0047 Marchantia polymorpha
MBI11_g04859_MAGBIO Magnolia biondii
MCO05G349 Micromonas commoda
MCO11G390 Micromonas commoda
MD04G1040400 Malus domestica
Medtr4g067160 Medicago truncatula
MELO3C011660.2 Cucumis melo
Migut.G01067 Erythranthe guttata
Nitab4.5_0001232g0010 Nicotiana tabacum
Nitab4.5_0001232g0020 Nicotiana tabacum
Nitab4.5_0001263g0020 Nicotiana tabacum
Nitab4.5_0001263g0030 Nicotiana tabacum
Nitab4.5_0001263g0040 Nicotiana tabacum
Nitab4.5_0001263g0060 Nicotiana tabacum
Nitab4.5_0001263g0070 Nicotiana tabacum
Nitab4.5_0001552g0020 Nicotiana tabacum
Nitab4.5_0001940g0010 Nicotiana tabacum
Nitab4.5_0001940g0020 Nicotiana tabacum
Nitab4.5_0001940g0040 Nicotiana tabacum
Nitab4.5_0001940g0050 Nicotiana tabacum
Nitab4.5_0001940g0060 Nicotiana tabacum
Nitab4.5_0003694g0020 Nicotiana tabacum
Nn1g09587 Nelumbo nucifera
Nn1g09603 Nelumbo nucifera
Nn1g09604 Nelumbo nucifera
Nn1g09605 Nelumbo nucifera
Nn1g09633 Nelumbo nucifera
Oeu061594.1 Olea europaea
Os04g0492500 Oryza sativa ssp. japonica
Os04g0492600 Oryza sativa ssp. japonica
Peaxi162Scf00126g00117 Petunia axillaris
Peaxi162Scf00126g00121 Petunia axillaris
Peaxi162Scf00126g00123 Petunia axillaris
Peaxi162Scf00126g00124 Petunia axillaris
PGR083G0732 Punica granatum
Phvul.011G054400 Phaseolus vulgaris
Potri.007G128300 Populus trichocarpa
Pp3c26_5370 Physcomitrium patens
PRCOL_00004354 Prasinoderma coloniale
PRCOL_00004602 Prasinoderma coloniale
Prupe.1G194100 Prunus persica
Prupe.7G151400 Prunus persica
Psat7g214880 Pisum sativum
PSO017G7170 Papaver somniferum
PSO210G7022 Papaver somniferum
PSO675G4708 Papaver somniferum
PSO761G0379 Papaver somniferum
QL04p017669 Quercus lobata
QL04p017728 Quercus lobata
QL10p048816 Quercus lobata
RcHm_v2.0_Chr2g0102471 Rosa chinensis
RcHm_v2.0_Chr2g0102541 Rosa chinensis
RcHm_v2.0_Chr2g0102571 Rosa chinensis
RcHm_v2.0_Chr4g0406781 Rosa chinensis
Rhsim02G0076900 Rhododendron simsii
Sabra07G0104700 Salix brachista
Sabra08G0009900 Salix brachista
Sabra08G0010300 Salix brachista
SalBow3G2610 Salvia bowleyana
Sc19g0002660 Simmondsia chinensis
Sed0025407 Sechium edule
SEGI_08545 Sequoiadendron giganteum
SEGI_39220 Sequoiadendron giganteum
SGA_v2.0_scaffold17G08091 Striga asiatica
SMO364G0666 Selaginella moellendorffii
Solyc11g044960.3 Solanum lycopersicum
Solyc11g044980.1 Solanum lycopersicum
Solyc11g044990.1 Solanum lycopersicum
Solyc11g045000.1 Solanum lycopersicum
Solyc11g045020.1 Solanum lycopersicum
Sopen11g020460 Solanum pennellii
Sp5g03730 Schrenkiella parvula
THA.LOC104803678 Tarenaya hassleriana
Thecc.04G179700 Theobroma cacao
Thhalv10005755m.g Eutrema salsugineum
TPR.G14766 Trifolium pratense
TPR.G27191 Trifolium pratense
TPR.G34255 Trifolium pratense
TPR.G8787 Trifolium pratense
TWI12G0322 Tripterygium wilfordii
TWI12G0366 Tripterygium wilfordii
TWI12G1029 Tripterygium wilfordii
TWI15G0158 Tripterygium wilfordii
TWI15G0580 Tripterygium wilfordii
TWI77G0748 Tripterygium wilfordii
unitig_747.g21328 Utricularia gibba
vmacro17326 Vaccinium macrocarpon
vmacro17327 Vaccinium macrocarpon
VMungo1127G0676 Vigna mungo
VMungo1127G0960 Vigna mungo
VMungo1127G1248 Vigna mungo
Zm00001eb078800 Zea mays

User provided reference genes

Program Settings